RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W RPC25P35718 212 aa2.4□□□□□ -2.03
VAM3YOR106W YHI9P38765 294 aa2.4□□□□□ -2.03
VAM3YOR106W YHR045WP38775 560 aa2.4□□□□□ -2.03
VAM3YOR106W PRO2P54885 456 aaKnown RBP2.4□□□□□ -2.03
VAM3YOR106W YPL039WQ03080 316 aa2.4□□□□□ -2.03
VAM3YOR106W VPS60Q03390 229 aa2.4□□□□□ -2.03
VAM3YOR106W GPN3Q06543 272 aa2.4□□□□□ -2.03
VAM3YOR106W BAT2P47176 376 aaKnown RBP2.39□□□□□ -2.03
VAM3YOR106W PET494P07390 489 aaPredicted RBP2.38□□□□□ -2.03
VAM3YOR106W OPI1P21957 404 aa2.38□□□□□ -2.03
VAM3YOR106W CAM1P29547 415 aaKnown RBP2.38□□□□□ -2.03
VAM3YOR106W NRG2P38082 220 aa2.38□□□□□ -2.03
VAM3YOR106W MNN9P39107 395 aaKnown RBP2.38□□□□□ -2.03
VAM3YOR106W AGP3P43548 558 aa2.38□□□□□ -2.03
VAM3YOR106W DAN1P47178 298 aa2.38□□□□□ -2.03
VAM3YOR106W SLM2P53955 656 aa2.38□□□□□ -2.03
VAM3YOR106W CUR1Q06469 252 aa2.38□□□□□ -2.03
VAM3YOR106W BER1Q06688 274 aaKnown RBP2.38□□□□□ -2.03
VAM3YOR106W GPI12P23797 304 aa2.37□□□□□ -2.03
VAM3YOR106W SPT8P38915 602 aa2.37□□□□□ -2.03
VAM3YOR106W MND1P53102 219 aa2.37□□□□□ -2.03
VAM3YOR106W YOR268CQ08734 132 aa2.37□□□□□ -2.03
VAM3YOR106W YBL112CQ3E7Y4 105 aa2.37□□□□□ -2.03
VAM3YOR106W TDH1P00360 332 aaKnown RBP2.36□□□□□ -2.03
VAM3YOR106W RAD10P06838 210 aa2.36□□□□□ -2.03
VAM3YOR106W TOM40P23644 387 aaKnown RBP2.36□□□□□ -2.03
VAM3YOR106W CSG2P35206 410 aa2.36□□□□□ -2.03
VAM3YOR106W ARN2P38724 620 aa2.36□□□□□ -2.03
VAM3YOR106W OSW5P40219 148 aa2.36□□□□□ -2.03
VAM3YOR106W FMP41P53889 259 aaKnown RBP2.36□□□□□ -2.03
VAM3YOR106W ECM18Q04623 453 aa2.36□□□□□ -2.03
VAM3YOR106W STF1P01098 86 aa2.35□□□□□ -2.03
VAM3YOR106W CSM1P25651 190 aa2.35□□□□□ -2.03
VAM3YOR106W ICL1P28240 557 aaPredicted RBP2.35□□□□□ -2.03
VAM3YOR106W HIS2P38635 335 aa2.35□□□□□ -2.03
VAM3YOR106W COG3P40094 801 aa2.34□□□□□ -2.03
VAM3YOR106W REX3Q12090 404 aa2.34□□□□□ -2.03
VAM3YOR106W YJL016WP47072 561 aa2.33□□□□□ -2.04
VAM3YOR106W IBA57P47158 497 aa2.33□□□□□ -2.04
VAM3YOR106W COS6P53344 381 aa2.33□□□□□ -2.04
VAM3YOR106W EMC6Q12431 108 aa2.33□□□□□ -2.04
VAM3YOR106W YHR086W-AQ3E746 53 aa2.33□□□□□ -2.04
VAM3YOR106W SFC1P33303 322 aa2.32□□□□□ -2.04
VAM3YOR106W HMT1P38074 348 aa2.32□□□□□ -2.04
VAM3YOR106W MRPL49P40858 161 aaPredicted RBP2.32□□□□□ -2.04
VAM3YOR106W GON7P46984 123 aa2.32□□□□□ -2.04
VAM3YOR106W PEX31P53203 462 aa2.32□□□□□ -2.04
VAM3YOR106W SDC1Q03323 175 aa2.32□□□□□ -2.04
VAM3YOR106W YMR114CQ04471 368 aaKnown RBP2.32□□□□□ -2.04
VAM3YOR106W BEM2P39960 2167 aaKnown RBP2.32□□□□□ -2.04
VAM3YOR106W YAL064W-BO13512 126 aa2.31□□□□□ -2.04
VAM3YOR106W DPB2P24482 689 aaPredicted RBP2.31□□□□□ -2.04
VAM3YOR106W LOC1P43586 204 aaPredicted RBP2.31□□□□□ -2.04
VAM3YOR106W NIF3P53081 288 aa2.31□□□□□ -2.04
VAM3YOR106W MDY2Q12285 212 aa2.31□□□□□ -2.04
VAM3YOR106W NOT5Q12514 560 aaPredicted RBP2.31□□□□□ -2.04
VAM3YOR106W RPS3P05750 240 aaKnown RBP2.3□□□□□ -2.04
VAM3YOR106W ADH3P07246 375 aaKnown RBP2.3□□□□□ -2.04
VAM3YOR106W PEX3P28795 441 aa2.3□□□□□ -2.04
VAM3YOR106W GRE3P38715 327 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
VAM3YOR106W YHL026CP38740 315 aa2.3□□□□□ -2.04
VAM3YOR106W CPD1P53314 239 aa2.3□□□□□ -2.04
VAM3YOR106W SEC10Q06245 871 aa2.3□□□□□ -2.04
VAM3YOR106W SMT3Q12306 101 aaKnown RBP2.3□□□□□ -2.04
VAM3YOR106W VPS45P38932 577 aa2.29□□□□□ -2.04
VAM3YOR106W NPT1P39683 429 aaKnown RBP2.29□□□□□ -2.04
VAM3YOR106W CAB4P53332 305 aa2.29□□□□□ -2.04
VAM3YOR106W SPO19Q03029 223 aa2.29□□□□□ -2.04
VAM3YOR106W BCP1Q06338 283 aa2.29□□□□□ -2.04
VAM3YOR106W LOA1Q06508 300 aa2.29□□□□□ -2.04
VAM3YOR106W RAD3P06839 778 aa2.28□□□□□ -2.04
VAM3YOR106W UGA1P17649 471 aa2.28□□□□□ -2.04
VAM3YOR106W KRR1P25586 316 aaPredicted RBP2.28□□□□□ -2.04
VAM3YOR106W TEM1P38987 245 aa2.28□□□□□ -2.04
VAM3YOR106W TAD2P47058 250 aa2.28□□□□□ -2.04
VAM3YOR106W YNL260CP53846 198 aa2.28□□□□□ -2.04
VAM3YOR106W DCR2Q05924 578 aa2.28□□□□□ -2.04
VAM3YOR106W SFH1Q06168 426 aa2.28□□□□□ -2.04
VAM3YOR106W YPL247CQ12523 523 aa2.28□□□□□ -2.04
VAM3YOR106W RNP1P32385 249 aa2.27□□□□□ -2.05
VAM3YOR106W DRE2P36152 348 aa2.27□□□□□ -2.05
VAM3YOR106W YJL027CP47063 138 aaPredicted RBP2.27□□□□□ -2.05
VAM3YOR106W TRM44Q02648 567 aaKnown RBP2.27□□□□□ -2.05
VAM3YOR106W YOS9Q99220 542 aa2.27□□□□□ -2.05
VAM3YOR106W GDH2P33327 1092 aaKnown RBP2.26□□□□□ -2.05
VAM3YOR106W YOR062CP36025 268 aa2.26□□□□□ -2.05
VAM3YOR106W TIF34P40217 347 aaKnown RBP2.26□□□□□ -2.05
VAM3YOR106W YNL050CP53952 270 aa2.26□□□□□ -2.05
VAM3YOR106W PER33Q12144 273 aa2.26□□□□□ -2.05
VAM3YOR106W PST1Q12355 444 aa2.26□□□□□ -2.05
VAM3YOR106W MAL32P38158 584 aa2.25□□□□□ -2.05
VAM3YOR106W SER33P40510 469 aa2.25□□□□□ -2.05
VAM3YOR106W AGX1P43567 385 aa2.25□□□□□ -2.05
VAM3YOR106W YFR054CP43622 192 aa2.25□□□□□ -2.05
VAM3YOR106W YJL118WP47022 219 aa2.25□□□□□ -2.05
VAM3YOR106W YJL028WP47062 111 aa2.25□□□□□ -2.05
VAM3YOR106W PNC1P53184 216 aaKnown RBP2.25□□□□□ -2.05
VAM3YOR106W SLX9P53251 210 aaPredicted RBP2.25□□□□□ -2.05
VAM3YOR106W MAL12P53341 584 aa2.25□□□□□ -2.05
VAM3YOR106W VBA1Q04301 562 aa2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 72.8 ms