RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W MAL13P53338 473 aa2.02□□□□□ -2.09
PEP12YOR036W YPL113CQ02961 396 aa2.02□□□□□ -2.09
PEP12YOR036W YDL144CQ07589 356 aa2.02□□□□□ -2.09
PEP12YOR036W PAM18Q07914 168 aa2.02□□□□□ -2.09
PEP12YOR036W YPL278CQ08990 100 aa2.02□□□□□ -2.09
PEP12YOR036W MSH5Q12175 901 aa2.02□□□□□ -2.09
PEP12YOR036W AUS1Q08409 1394 aa2.01□□□□□ -2.09
PEP12YOR036W COX10P21592 462 aa2.01□□□□□ -2.09
PEP12YOR036W RPS5P26783 225 aaKnown RBP2.01□□□□□ -2.09
PEP12YOR036W TPS2P31688 896 aaKnown RBP2.01□□□□□ -2.09
PEP12YOR036W BFR1P38934 470 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09not detected
PEP12YOR036W ASP1P38986 381 aaPredicted RBP2.01□□□□□ -2.09
PEP12YOR036W SEN34P39707 275 aa2.01□□□□□ -2.09
PEP12YOR036W FRT2P39734 528 aa2.01□□□□□ -2.09
PEP12YOR036W YER184CP39961 794 aa2.01□□□□□ -2.09
PEP12YOR036W EDC2P40023 145 aaPredicted RBP2.01□□□□□ -2.09
PEP12YOR036W AVT7P40501 490 aa2.01□□□□□ -2.09
PEP12YOR036W RPL10P41805 221 aaKnown RBP2.01□□□□□ -2.09
PEP12YOR036W GLG2P47011 380 aa2.01□□□□□ -2.09
PEP12YOR036W YJR012CP47087 207 aa2.01□□□□□ -2.09
PEP12YOR036W COQ5P49017 307 aa2.01□□□□□ -2.09
PEP12YOR036W PRP24P49960 444 aaKnown RBP2.01□□□□□ -2.09
PEP12YOR036W NBP1P52919 319 aaPredicted RBP2.01□□□□□ -2.09
PEP12YOR036W YGL118CP53132 145 aa2.01□□□□□ -2.09
PEP12YOR036W KRE28Q04431 385 aa2.01□□□□□ -2.09
PEP12YOR036W SNF8Q12483 233 aa2.01□□□□□ -2.09
PEP12YOR036W AI5_BETAQ9ZZX0 354 aa2.01□□□□□ -2.09
PEP12YOR036W TDH2P00358 332 aaKnown RBP2□□□□□ -2.09
PEP12YOR036W CKA2P19454 339 aa2□□□□□ -2.09
PEP12YOR036W PHO80P20052 293 aa2□□□□□ -2.09
PEP12YOR036W RPO26P20435 155 aa2□□□□□ -2.09
PEP12YOR036W OSM1P21375 501 aaKnown RBP2□□□□□ -2.09
PEP12YOR036W RNA15P25299 296 aaPredicted RBP2□□□□□ -2.09
PEP12YOR036W YCR016WP25617 290 aaKnown RBP2□□□□□ -2.09
PEP12YOR036W IMP1P28627 190 aa2□□□□□ -2.09
PEP12YOR036W QRI5P32344 111 aa2□□□□□ -2.09
PEP12YOR036W MSN4P33749 630 aa2□□□□□ -2.09
PEP12YOR036W MED8P38304 223 aa2□□□□□ -2.09
PEP12YOR036W YHL044WP38727 235 aa2□□□□□ -2.09
PEP12YOR036W SMB1P40018 196 aaKnown RBP2□□□□□ -2.09
PEP12YOR036W AVT6P40074 448 aa2□□□□□ -2.09
PEP12YOR036W YIL012WP40551 113 aa2□□□□□ -2.09
PEP12YOR036W YFL012WP43580 148 aa2□□□□□ -2.09
PEP12YOR036W UFD1P53044 361 aa2□□□□□ -2.09
PEP12YOR036W MRPL50P53724 139 aa2□□□□□ -2.09
PEP12YOR036W ARC18Q05933 178 aaKnown RBP2□□□□□ -2.09
PEP12YOR036W FLO11P08640 1367 aa1.99□□□□□ -2.09
PEP12YOR036W CFT1Q06632 1357 aaKnown RBP1.99□□□□□ -2.09
PEP12YOR036W YMR316C-AI2HB70 103 aa1.99□□□□□ -2.09
PEP12YOR036W RPL4AP10664 362 aaKnown RBP1.99□□□□□ -2.09
PEP12YOR036W FUS3P16892 353 aaKnown RBP1.99□□□□□ -2.09
PEP12YOR036W VPS3P23643 1011 aa1.99□□□□□ -2.09
PEP12YOR036W EHD3P28817 500 aa1.99□□□□□ -2.09
PEP12YOR036W CAM1P29547 415 aaKnown RBP1.99□□□□□ -2.09
PEP12YOR036W HOM6P31116 359 aaKnown RBP1.99□□□□□ -2.09
PEP12YOR036W NTG1P31378 399 aa1.99□□□□□ -2.09
PEP12YOR036W KRE6P32486 720 aa1.99□□□□□ -2.09
PEP12YOR036W SRB4P32569 687 aa1.99□□□□□ -2.09
PEP12YOR036W CAT2P32796 670 aaKnown RBP1.99□□□□□ -2.09
PEP12YOR036W MID2P36027 376 aa1.99□□□□□ -2.09
PEP12YOR036W POP8P38208 133 aa1.99□□□□□ -2.09
PEP12YOR036W YHI9P38765 294 aa1.99□□□□□ -2.09
PEP12YOR036W BDH1P39714 382 aa1.99□□□□□ -2.09
PEP12YOR036W RTR1P40084 226 aaPredicted RBP1.99□□□□□ -2.09
PEP12YOR036W OTU1P43558 301 aa1.99□□□□□ -2.09
PEP12YOR036W HOC1P47124 396 aa1.99□□□□□ -2.09
PEP12YOR036W RPL4BP49626 362 aaKnown RBP1.99□□□□□ -2.09
PEP12YOR036W HSH155P49955 971 aaKnown RBP1.99□□□□□ -2.09
PEP12YOR036W CAX4P53223 239 aa1.99□□□□□ -2.09
PEP12YOR036W FMP41P53889 259 aaKnown RBP1.99□□□□□ -2.09
PEP12YOR036W MRS2Q01926 470 aa1.99□□□□□ -2.09
PEP12YOR036W SMD1Q02260 146 aaPredicted RBP1.99□□□□□ -2.09
PEP12YOR036W EBS1Q03466 884 aaKnown RBP1.99□□□□□ -2.09
PEP12YOR036W MYO5Q04439 1219 aaKnown RBP1.99□□□□□ -2.09
PEP12YOR036W CDC42P19073 191 aa1.98□□□□□ -2.09
PEP12YOR036W ERG2P32352 222 aa1.98□□□□□ -2.09
PEP12YOR036W BMH2P34730 273 aaKnown RBP1.98□□□□□ -2.09
PEP12YOR036W HMT1P38074 348 aa1.98□□□□□ -2.09
PEP12YOR036W LDB7P38210 180 aa1.98□□□□□ -2.09
PEP12YOR036W MSS2P40990 351 aa1.98□□□□□ -2.09
PEP12YOR036W SYS1P41544 203 aa1.98□□□□□ -2.09
PEP12YOR036W JHD2P47156 728 aaPredicted RBP1.98□□□□□ -2.09
PEP12YOR036W YNL095CP53932 642 aa1.98□□□□□ -2.09
PEP12YOR036W YDR209CQ03480 137 aa1.98□□□□□ -2.09
PEP12YOR036W ECM11Q04110 302 aa1.98□□□□□ -2.09
PEP12YOR036W DXO1Q06349 442 aa1.98□□□□□ -2.09
PEP12YOR036W YDL211CQ12121 372 aa1.98□□□□□ -2.09
PEP12YOR036W COS2P0CX12 379 aa1.97□□□□□ -2.09
PEP12YOR036W COS3P0CX13 379 aa1.97□□□□□ -2.09
PEP12YOR036W MATALPHA1P0CY06 175 aa1.97□□□□□ -2.09
PEP12YOR036W HMLALPHA1P0CY07 175 aa1.97□□□□□ -2.09
PEP12YOR036W TCP1P12612 559 aaKnown RBP1.97□□□□□ -2.09
PEP12YOR036W CUP2P15315 225 aa1.97□□□□□ -2.09
PEP12YOR036W CPT1P17898 393 aa1.97□□□□□ -2.09
PEP12YOR036W HEK2P38199 381 aaKnown RBP RIP-Chip data1.97□□□□□ -2.09 RIP-Chip
PEP12YOR036W YBR096WP38256 230 aa1.97□□□□□ -2.09
PEP12YOR036W YHL049CP38722 271 aa1.97□□□□□ -2.09
PEP12YOR036W TCD1P38756 429 aa1.97□□□□□ -2.09
PEP12YOR036W TRR2P38816 342 aa1.97□□□□□ -2.09
PEP12YOR036W COS4P43542 379 aa1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms