RNA–Protein interactions for RNA: YOL013C

HRD1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene HRD1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD1YOL013C YKE4P40544 346 aa2.84□□□□□ -1.95
HRD1YOL013C YNL320WP42840 284 aa2.84□□□□□ -1.95
HRD1YOL013C LCB3P47013 409 aa2.84□□□□□ -1.95
HRD1YOL013C IKS1P47042 667 aa2.84□□□□□ -1.95
HRD1YOL013C USE1P53146 245 aa2.84□□□□□ -1.95
HRD1YOL013C GOR1P53839 350 aa2.84□□□□□ -1.95
HRD1YOL013C ASI3P53983 676 aa2.84□□□□□ -1.95
HRD1YOL013C YMR181CQ03231 154 aa2.84□□□□□ -1.95
HRD1YOL013C YMR027WQ04371 470 aa2.84□□□□□ -1.95
HRD1YOL013C YMR317WQ04893 1140 aa2.84□□□□□ -1.95
HRD1YOL013C ARC18Q05933 178 aaKnown RBP2.84□□□□□ -1.95
HRD1YOL013C YOR114WQ12219 294 aa2.84□□□□□ -1.95
HRD1YOL013C YPR064WQ12492 139 aa2.84□□□□□ -1.95
HRD1YOL013C NUP157P40064 1391 aaKnown RBP2.84□□□□□ -1.96
HRD1YOL013C PDR12Q02785 1511 aa2.83□□□□□ -1.96
HRD1YOL013C RPS3P05750 240 aaKnown RBP2.83□□□□□ -1.96
HRD1YOL013C PMT2P31382 759 aa2.83□□□□□ -1.96
HRD1YOL013C SSO1P32867 290 aa2.83□□□□□ -1.96
HRD1YOL013C FRT2P39734 528 aa2.83□□□□□ -1.96
HRD1YOL013C BMT5P40493 336 aa2.83□□□□□ -1.96
HRD1YOL013C SER33P40510 469 aa2.83□□□□□ -1.96
HRD1YOL013C TPN1P53099 579 aa2.83□□□□□ -1.96
HRD1YOL013C YGL082WP53155 381 aa2.83□□□□□ -1.96
HRD1YOL013C SLX9P53251 210 aaPredicted RBP2.83□□□□□ -1.96
HRD1YOL013C SUR7P54003 302 aa2.83□□□□□ -1.96
HRD1YOL013C MRS2Q01926 470 aa2.83□□□□□ -1.96
HRD1YOL013C RNY1Q02933 434 aaKnown RBP2.83□□□□□ -1.96
HRD1YOL013C YMR166CQ03829 368 aa2.83□□□□□ -1.96
HRD1YOL013C YDR415CQ04033 374 aaPredicted RBP2.83□□□□□ -1.96
HRD1YOL013C PEX10Q05568 337 aa2.83□□□□□ -1.96
HRD1YOL013C ATG17Q06410 417 aa2.83□□□□□ -1.96
HRD1YOL013C LOA1Q06508 300 aa2.83□□□□□ -1.96
HRD1YOL013C BRX1Q08235 291 aaKnown RBP2.83□□□□□ -1.96
HRD1YOL013C YGK3Q12222 375 aaPredicted RBP2.83□□□□□ -1.96
HRD1YOL013C YCT1Q12235 531 aa2.83□□□□□ -1.96
HRD1YOL013C SME1Q12330 94 aaPredicted RBP2.83□□□□□ -1.96
HRD1YOL013C RPL28P02406 149 aaKnown RBP2.82□□□□□ -1.96
HRD1YOL013C CYC3P06182 269 aa2.82□□□□□ -1.96
HRD1YOL013C PHO2P07269 559 aa2.82□□□□□ -1.96
HRD1YOL013C PET494P07390 489 aaPredicted RBP2.82□□□□□ -1.96
HRD1YOL013C RPL23AP0CX41 137 aaKnown RBP2.82□□□□□ -1.96
HRD1YOL013C RPL23BP0CX42 137 aaKnown RBP2.82□□□□□ -1.96
HRD1YOL013C CMK2P22517 447 aa2.82□□□□□ -1.96
HRD1YOL013C PEX22P39718 180 aa2.82□□□□□ -1.96
HRD1YOL013C RPH1P39956 796 aa2.82□□□□□ -1.96
HRD1YOL013C TPC1P53257 314 aa2.82□□□□□ -1.96
HRD1YOL013C SWS2P53937 143 aa2.82□□□□□ -1.96
HRD1YOL013C DPP1Q05521 289 aa2.82□□□□□ -1.96
HRD1YOL013C PEX30Q06169 523 aa2.82□□□□□ -1.96
HRD1YOL013C YEH2Q07950 538 aa2.82□□□□□ -1.96
HRD1YOL013C YDL109CQ12103 647 aa2.82□□□□□ -1.96
HRD1YOL013C RRP42Q12277 265 aaPredicted RBP2.82□□□□□ -1.96
HRD1YOL013C JLP1Q12358 412 aa2.82□□□□□ -1.96
HRD1YOL013C YDL199CQ12407 687 aa2.82□□□□□ -1.96
HRD1YOL013C TPI1P00942 248 aaKnown RBP2.82□□□□□ -1.96
HRD1YOL013C PHO80P20052 293 aa2.82□□□□□ -1.96
HRD1YOL013C RNA14P25298 677 aaKnown RBP2.82□□□□□ -1.96
HRD1YOL013C RPL16AP26784 199 aaKnown RBP2.82□□□□□ -1.96
HRD1YOL013C INO2P26798 304 aa2.82□□□□□ -1.96
HRD1YOL013C VPS51P36116 164 aa2.82□□□□□ -1.96
HRD1YOL013C FMP46P36141 133 aaKnown RBP2.82□□□□□ -1.96
HRD1YOL013C RFT1P38206 574 aaPredicted RBP2.82□□□□□ -1.96
HRD1YOL013C MTC4P38335 694 aaKnown RBP2.82□□□□□ -1.96
HRD1YOL013C NDT80P38830 627 aa2.82□□□□□ -1.96
HRD1YOL013C POG1P40473 351 aa2.82□□□□□ -1.96
HRD1YOL013C AIM23P47015 356 aa2.82□□□□□ -1.96
HRD1YOL013C TRM9P49957 279 aa2.82□□□□□ -1.96
HRD1YOL013C MIC26P50087 233 aa2.82□□□□□ -1.96
HRD1YOL013C VAC7P53950 1165 aa2.82□□□□□ -1.96
HRD1YOL013C YTH1Q06102 208 aaPredicted RBP2.82□□□□□ -1.96
HRD1YOL013C YLR446WQ06204 433 aa2.82□□□□□ -1.96
HRD1YOL013C MHR1Q06630 226 aa2.82□□□□□ -1.96
HRD1YOL013C THP3Q12049 470 aaKnown RBP2.82□□□□□ -1.96
HRD1YOL013C PER33Q12144 273 aa2.82□□□□□ -1.96
HRD1YOL013C DCN1Q12395 269 aa2.82□□□□□ -1.96
HRD1YOL013C YPL119C-AQ3E751 87 aa2.82□□□□□ -1.96
HRD1YOL013C GCN2P15442 1659 aa2.82□□□□□ -1.96
HRD1YOL013C MET5P47169 1442 aa2.81□□□□□ -1.96
HRD1YOL013C MRS3P10566 314 aa2.81□□□□□ -1.96
HRD1YOL013C SPS18P32572 300 aa2.81□□□□□ -1.96
HRD1YOL013C MIX23P38162 196 aa2.81□□□□□ -1.96
HRD1YOL013C TRM5P38793 499 aa2.81□□□□□ -1.96
HRD1YOL013C SUR2P38992 349 aa2.81□□□□□ -1.96
HRD1YOL013C COX14P39103 70 aa2.81□□□□□ -1.96
HRD1YOL013C SSU72P53538 206 aaPredicted RBP2.81□□□□□ -1.96
HRD1YOL013C TRM44Q02648 567 aaKnown RBP2.81□□□□□ -1.96
HRD1YOL013C SCS7Q03529 384 aa2.81□□□□□ -1.96
HRD1YOL013C RRP17Q04031 235 aaPredicted RBP2.81□□□□□ -1.96
HRD1YOL013C GMC1Q04399 608 aa2.81□□□□□ -1.96
HRD1YOL013C YHC1Q05900 231 aaKnown RBP2.81□□□□□ -1.96
HRD1YOL013C MFG1Q07684 458 aa2.81□□□□□ -1.96
HRD1YOL013C MIM1Q08176 113 aa2.81□□□□□ -1.96
HRD1YOL013C FCY22Q12119 530 aa2.81□□□□□ -1.96
HRD1YOL013C AYT1Q12226 474 aa2.81□□□□□ -1.96
HRD1YOL013C EAF3Q12432 401 aa2.81□□□□□ -1.96
HRD1YOL013C PCL9Q12477 304 aa2.81□□□□□ -1.96
HRD1YOL013C HEM4P06174 275 aa2.8□□□□□ -1.96
HRD1YOL013C PPH21P23594 369 aa2.8□□□□□ -1.96
HRD1YOL013C MEI4P29467 408 aa2.8□□□□□ -1.96
HRD1YOL013C CDC13P32797 924 aaKnown RBP2.8□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 103 ms