RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C ODC2Q99297 307 aa7.78□□□□□ -1.16
RPD3YNL330C DBF20P32328 564 aa7.78□□□□□ -1.16
RPD3YNL330C EMP24P32803 203 aaKnown RBP7.78□□□□□ -1.16
RPD3YNL330C GCV3P39726 170 aaPredicted RBP7.78□□□□□ -1.16
RPD3YNL330C AVT7P40501 490 aa7.78□□□□□ -1.16
RPD3YNL330C OTU1P43558 301 aa7.78□□□□□ -1.16
RPD3YNL330C CIN2P46670 268 aa7.78□□□□□ -1.16
RPD3YNL330C GPI14P47088 403 aaKnown RBP7.78□□□□□ -1.16
RPD3YNL330C TYW3P53177 273 aa7.78□□□□□ -1.16
RPD3YNL330C ENB1Q08299 606 aa7.78□□□□□ -1.16
RPD3YNL330C RTK1Q12100 620 aaPredicted RBP7.78□□□□□ -1.16
RPD3YNL330C MCP1Q12106 302 aa7.78□□□□□ -1.16
RPD3YNL330C ORT1Q12375 292 aa7.78□□□□□ -1.16
RPD3YNL330C CCH1P50077 2039 aa7.77□□□□□ -1.17
RPD3YNL330C IPP1P00817 287 aaKnown RBP7.77□□□□□ -1.17
RPD3YNL330C FUR4P05316 633 aaKnown RBP7.77□□□□□ -1.17
RPD3YNL330C RPS13P05756 151 aaKnown RBP7.77□□□□□ -1.17
RPD3YNL330C URA6P15700 204 aa7.77□□□□□ -1.17
RPD3YNL330C ERG4P25340 473 aa7.77□□□□□ -1.17
RPD3YNL330C SRP102P36057 244 aaPredicted RBP7.77□□□□□ -1.17
RPD3YNL330C PAN3P36102 679 aaPredicted RBP7.77□□□□□ -1.17
RPD3YNL330C FLO10P36170 1169 aa7.77□□□□□ -1.17
RPD3YNL330C MRPL27P36526 146 aaPredicted RBP7.77□□□□□ -1.17
RPD3YNL330C ALG3P38179 458 aa7.77□□□□□ -1.17
RPD3YNL330C YPC1P38298 316 aa7.77□□□□□ -1.17
RPD3YNL330C BFR1P38934 470 aaKnown RBP RIP-Chip data7.77□□□□□ -1.17 RIP-Chip
RPD3YNL330C PUG1P40100 303 aa7.77□□□□□ -1.17
RPD3YNL330C MNN10P50108 393 aaKnown RBP7.77□□□□□ -1.17
RPD3YNL330C SCW4P53334 386 aaKnown RBP7.77□□□□□ -1.17
RPD3YNL330C SWS2P53937 143 aa7.77□□□□□ -1.17
RPD3YNL330C YLR152CP54072 576 aa7.77□□□□□ -1.17
RPD3YNL330C SMX3P54999 86 aaPredicted RBP7.77□□□□□ -1.17
RPD3YNL330C BUD25P85052 153 aa7.77□□□□□ -1.17
RPD3YNL330C PEX25Q02969 394 aa7.77□□□□□ -1.17
RPD3YNL330C NOC4Q06512 552 aaPredicted RBP7.77□□□□□ -1.17
RPD3YNL330C RLM1Q12224 676 aa7.77□□□□□ -1.17
RPD3YNL330C EAF3Q12432 401 aa7.77□□□□□ -1.17
RPD3YNL330C RRI1Q12468 440 aa7.77□□□□□ -1.17
RPD3YNL330C SSA3P09435 649 aaKnown RBP7.76□□□□□ -1.17
RPD3YNL330C LDS1P31379 325 aa7.76□□□□□ -1.17
RPD3YNL330C COQ2P32378 372 aa7.76□□□□□ -1.17
RPD3YNL330C NRP1P32770 719 aaKnown RBP RIP-Chip data7.76□□□□□ -1.17not detected
RPD3YNL330C SNC2P33328 115 aa7.76□□□□□ -1.17
RPD3YNL330C SRX1P36077 127 aa7.76□□□□□ -1.17
RPD3YNL330C CHS7P38843 316 aa7.76□□□□□ -1.17
RPD3YNL330C ASP1P38986 381 aaPredicted RBP7.76□□□□□ -1.17
RPD3YNL330C SRB7P47822 140 aa7.76□□□□□ -1.17
RPD3YNL330C YOL073CQ08232 322 aa7.76□□□□□ -1.17
RPD3YNL330C TDH1P00360 332 aaKnown RBP7.75□□□□□ -1.17
RPD3YNL330C SEC22P22214 214 aa7.75□□□□□ -1.17
RPD3YNL330C CPR2P23285 205 aa7.75□□□□□ -1.17
RPD3YNL330C CPR4P25334 318 aa7.75□□□□□ -1.17
RPD3YNL330C PET18P25362 215 aa7.75□□□□□ -1.17
RPD3YNL330C ISC10P32645 267 aa7.75□□□□□ -1.17
RPD3YNL330C LAG1P38703 411 aa7.75□□□□□ -1.17
RPD3YNL330C YJR111CP47148 283 aaKnown RBP7.75□□□□□ -1.17
RPD3YNL330C SNN1P48232 102 aa7.75□□□□□ -1.17
RPD3YNL330C LYS5P50113 272 aa7.75□□□□□ -1.17
RPD3YNL330C PHO23P50947 330 aa7.75□□□□□ -1.17
RPD3YNL330C EKI1Q03764 534 aa7.75□□□□□ -1.17
RPD3YNL330C HNT1Q04344 158 aaKnown RBP7.75□□□□□ -1.17
RPD3YNL330C VBA4Q04602 768 aaKnown RBP7.75□□□□□ -1.17
RPD3YNL330C DCS1Q06151 350 aa7.75□□□□□ -1.17
RPD3YNL330C GRC3Q07845 632 aa7.75□□□□□ -1.17
RPD3YNL330C BSC6Q08280 497 aa7.75□□□□□ -1.17
RPD3YNL330C SNU23Q12368 194 aaPredicted RBP7.75□□□□□ -1.17
RPD3YNL330C TFC7Q12415 435 aa7.75□□□□□ -1.17
RPD3YNL330C CYT1P07143 309 aa7.74□□□□□ -1.17
RPD3YNL330C MRPL33P20084 86 aa7.74□□□□□ -1.17
RPD3YNL330C RPB8P20436 146 aa7.74□□□□□ -1.17
RPD3YNL330C ADH7P25377 361 aa7.74□□□□□ -1.17
RPD3YNL330C PPZ2P33329 710 aa7.74□□□□□ -1.17
RPD3YNL330C MKS1P34072 584 aa7.74□□□□□ -1.17
RPD3YNL330C SSH1P38353 490 aaKnown RBP7.74□□□□□ -1.17
RPD3YNL330C YHR180WP38868 163 aa7.74□□□□□ -1.17
RPD3YNL330C DLS1P40366 167 aa7.74□□□□□ -1.17
RPD3YNL330C NAS2P40555 220 aa7.74□□□□□ -1.17
RPD3YNL330C IDP2P41939 412 aa7.74□□□□□ -1.17
RPD3YNL330C CIS3P47001 227 aa7.74□□□□□ -1.17
RPD3YNL330C YJR141WP47172 347 aaPredicted RBP7.74□□□□□ -1.17
RPD3YNL330C BXI1P48558 297 aa7.74□□□□□ -1.17
RPD3YNL330C YIP4P53093 235 aa7.74□□□□□ -1.17
RPD3YNL330C YGL159WP53110 370 aa7.74□□□□□ -1.17
RPD3YNL330C YLR460CP54007 376 aa7.74□□□□□ -1.17
RPD3YNL330C APM1Q00776 475 aaPredicted RBP7.74□□□□□ -1.17
RPD3YNL330C ODC1Q03028 310 aa7.74□□□□□ -1.17
RPD3YNL330C DXO1Q06349 442 aa7.74□□□□□ -1.17
RPD3YNL330C OPI3P05375 206 aa7.73□□□□□ -1.17
RPD3YNL330C YSF3P0C074 85 aaPredicted RBP7.73□□□□□ -1.17
RPD3YNL330C HNM1P19807 563 aa7.73□□□□□ -1.17
RPD3YNL330C ZRC1P20107 442 aa7.73□□□□□ -1.17
RPD3YNL330C NFS1P25374 497 aa7.73□□□□□ -1.17
RPD3YNL330C RPS27AP35997 82 aaKnown RBP7.73□□□□□ -1.17
RPD3YNL330C RPS27BP38711 82 aa7.73□□□□□ -1.17
RPD3YNL330C FMO1P38866 432 aa7.73□□□□□ -1.17
RPD3YNL330C YIL067CP40514 678 aa7.73□□□□□ -1.17
RPD3YNL330C CAF16P43569 289 aa7.73□□□□□ -1.17
RPD3YNL330C OKP1P53298 406 aa7.73□□□□□ -1.17
RPD3YNL330C HHO1P53551 258 aa7.73□□□□□ -1.17
RPD3YNL330C CWC24P53769 259 aa7.73□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms