RNA–Protein interactions for RNA: YNL288W

CAF40, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CAF40, Length 1,122 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF40YNL288W NDC1P32500 655 aa5.37□□□□□ -1.55
CAF40YNL288W SRP102P36057 244 aaPredicted RBP5.37□□□□□ -1.55
CAF40YNL288W RIX1P38883 763 aaPredicted RBP5.37□□□□□ -1.55
CAF40YNL288W RIO2P40160 425 aaKnown RBP5.37□□□□□ -1.55
CAF40YNL288W SDP1P40479 209 aa5.37□□□□□ -1.55
CAF40YNL288W PCP1P53259 346 aa5.37□□□□□ -1.55
CAF40YNL288W YNL092WP53934 400 aa5.37□□□□□ -1.55
CAF40YNL288W GRX5Q02784 150 aa5.37□□□□□ -1.55
CAF40YNL288W CRR1Q05790 422 aa5.37□□□□□ -1.55
CAF40YNL288W CTS2Q06350 511 aa5.37□□□□□ -1.55
CAF40YNL288W ATG17Q06410 417 aa5.37□□□□□ -1.55
CAF40YNL288W RAF1Q06891 181 aa5.37□□□□□ -1.55
CAF40YNL288W GSH2Q08220 491 aa5.37□□□□□ -1.55
CAF40YNL288W ENV7Q12003 364 aa5.37□□□□□ -1.55
CAF40YNL288W TRA1P38811 3744 aa5.37□□□□□ -1.55
CAF40YNL288W MAK32P23060 363 aa5.36□□□□□ -1.55
CAF40YNL288W FUN19P28003 413 aaPredicted RBP5.36□□□□□ -1.55
CAF40YNL288W ECT1P33412 323 aa5.36□□□□□ -1.55
CAF40YNL288W YBR096WP38256 230 aa5.36□□□□□ -1.55
CAF40YNL288W CHS7P38843 316 aa5.36□□□□□ -1.55
CAF40YNL288W PTH1P38876 190 aaKnown RBP5.36□□□□□ -1.55
CAF40YNL288W SEN34P39707 275 aa5.36□□□□□ -1.55
CAF40YNL288W AIM10P39965 576 aaKnown RBP5.36□□□□□ -1.55
CAF40YNL288W SLZ1P40167 298 aa5.36□□□□□ -1.55
CAF40YNL288W DPB11P47027 764 aaPredicted RBP5.36□□□□□ -1.55
CAF40YNL288W ADO1P47143 340 aaKnown RBP5.36□□□□□ -1.55
CAF40YNL288W NUP49Q02199 472 aa5.36□□□□□ -1.55
CAF40YNL288W YDR102CQ03864 110 aa5.36□□□□□ -1.55
CAF40YNL288W NEJ1Q06148 342 aa5.36□□□□□ -1.55
CAF40YNL288W RCN2Q12044 265 aa5.36□□□□□ -1.55
CAF40YNL288W LAS17Q12446 633 aa5.36□□□□□ -1.55
CAF40YNL288W PRP8P33334 2413 aaKnown RBP5.35□□□□□ -1.55
CAF40YNL288W OPI3P05375 206 aa5.35□□□□□ -1.55
CAF40YNL288W MET17P06106 444 aa5.35□□□□□ -1.55
CAF40YNL288W GIT1P25346 518 aa5.35□□□□□ -1.55
CAF40YNL288W YPK3P38070 525 aa5.35□□□□□ -1.55
CAF40YNL288W DTR1P38125 572 aa5.35□□□□□ -1.55
CAF40YNL288W SHE1P38200 338 aa5.35□□□□□ -1.55
CAF40YNL288W AVT6P40074 448 aa5.35□□□□□ -1.55
CAF40YNL288W GPP1P41277 250 aaKnown RBP5.35□□□□□ -1.55
CAF40YNL288W IDP2P41939 412 aa5.35□□□□□ -1.55
CAF40YNL288W RBL2P48606 106 aaKnown RBP5.35□□□□□ -1.55
CAF40YNL288W VOA1P53262 265 aa5.35□□□□□ -1.55
CAF40YNL288W PET191Q02772 108 aa5.35□□□□□ -1.55
CAF40YNL288W YLR173WQ06247 608 aa5.35□□□□□ -1.55
CAF40YNL288W IPK1Q06667 281 aa5.35□□□□□ -1.55
CAF40YNL288W AIM6Q07716 390 aa5.35□□□□□ -1.55
CAF40YNL288W MCH4Q08268 501 aa5.35□□□□□ -1.55
CAF40YNL288W SYC1Q08553 188 aaPredicted RBP5.35□□□□□ -1.55
CAF40YNL288W THP3Q12049 470 aaKnown RBP5.35□□□□□ -1.55
CAF40YNL288W RRI1Q12468 440 aa5.35□□□□□ -1.55
CAF40YNL288W FOL3Q12676 427 aaPredicted RBP5.35□□□□□ -1.55
CAF40YNL288W SCEIP03882 235 aa5.34□□□□□ -1.55
CAF40YNL288W KIN28P06242 306 aa5.34□□□□□ -1.55
CAF40YNL288W HMG1P12683 1054 aa5.34□□□□□ -1.55
CAF40YNL288W MTC2P34246 357 aa5.34□□□□□ -1.55
CAF40YNL288W MTC6P38849 526 aa5.34□□□□□ -1.55
CAF40YNL288W IES5P40060 125 aa5.34□□□□□ -1.55
CAF40YNL288W DDI1P40087 428 aa5.34□□□□□ -1.55
CAF40YNL288W MKC7P53379 596 aa5.34□□□□□ -1.55
CAF40YNL288W RPL6AQ02326 176 aaKnown RBP5.34□□□□□ -1.55
CAF40YNL288W YDR387CQ04162 555 aa5.34□□□□□ -1.55
CAF40YNL288W MRX8Q05473 314 aa5.34□□□□□ -1.55
CAF40YNL288W YOL114CQ12322 202 aa5.34□□□□□ -1.55
CAF40YNL288W NKP1Q12493 238 aa5.34□□□□□ -1.55
CAF40YNL288W DBF2P22204 572 aa5.33□□□□□ -1.56
CAF40YNL288W RPI1P23250 407 aaKnown RBP5.33□□□□□ -1.56
CAF40YNL288W CPR2P23285 205 aa5.33□□□□□ -1.56
CAF40YNL288W PUT3P25502 979 aaPredicted RBP5.33□□□□□ -1.56
CAF40YNL288W KRR1P25586 316 aaPredicted RBP5.33□□□□□ -1.56
CAF40YNL288W ITR1P30605 584 aa5.33□□□□□ -1.56
CAF40YNL288W SDS22P36047 338 aa5.33□□□□□ -1.56
CAF40YNL288W YBR063CP38083 404 aa5.33□□□□□ -1.56
CAF40YNL288W NVJ1P38881 321 aa5.33□□□□□ -1.56
CAF40YNL288W PFS2P42841 465 aaKnown RBP5.33□□□□□ -1.56
CAF40YNL288W CCC1P47818 322 aa5.33□□□□□ -1.56
CAF40YNL288W MRP51Q02950 344 aa5.33□□□□□ -1.56
CAF40YNL288W PRP3Q03338 469 aaPredicted RBP5.33□□□□□ -1.56
CAF40YNL288W RCE1Q03530 315 aa5.33□□□□□ -1.56
CAF40YNL288W NNT1Q05874 261 aa5.33□□□□□ -1.56
CAF40YNL288W RKM1Q08961 583 aaPredicted RBP5.33□□□□□ -1.56
CAF40YNL288W MED2Q12124 431 aa5.33□□□□□ -1.56
CAF40YNL288W RBD2Q12270 262 aa5.33□□□□□ -1.56
CAF40YNL288W MEC1P38111 2368 aa5.33□□□□□ -1.56
CAF40YNL288W RPS16AP0CX51 143 aaKnown RBP5.32□□□□□ -1.56
CAF40YNL288W RPS16BP0CX52 143 aaKnown RBP5.32□□□□□ -1.56
CAF40YNL288W STE18P18852 110 aa5.32□□□□□ -1.56
CAF40YNL288W RPA135P22138 1203 aaKnown RBP5.32□□□□□ -1.56
CAF40YNL288W RPS5P26783 225 aaKnown RBP5.32□□□□□ -1.56
CAF40YNL288W RPC34P32910 317 aa5.32□□□□□ -1.56
CAF40YNL288W VPS17P32913 551 aa5.32□□□□□ -1.56
CAF40YNL288W THI2P38141 450 aa5.32□□□□□ -1.56
CAF40YNL288W YHL037CP38733 133 aa5.32□□□□□ -1.56
CAF40YNL288W YMR144WP40214 342 aaKnown RBP5.32□□□□□ -1.56
CAF40YNL288W FMC1P40491 155 aa5.32□□□□□ -1.56
CAF40YNL288W AVT7P40501 490 aa5.32□□□□□ -1.56
CAF40YNL288W MOB2P43563 287 aa5.32□□□□□ -1.56
CAF40YNL288W RMD9P53140 646 aaKnown RBP5.32□□□□□ -1.56
CAF40YNL288W SAY1P53324 424 aa5.32□□□□□ -1.56
CAF40YNL288W PAU12P53343 120 aa5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms