RNA–Protein interactions for RNA: YMR153W

NUP53, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene NUP53, Length 1,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP53YMR153W NOP56Q12460 504 aaKnown RBP RIP-Chip data6.55□□□□□ -1.36not detected
NUP53YMR153W MES1P00958 751 aaKnown RBP6.54□□□□□ -1.36
NUP53YMR153W REP1P03871 373 aa6.54□□□□□ -1.36
NUP53YMR153W PDE2P06776 526 aa6.54□□□□□ -1.36
NUP53YMR153W MET3P08536 511 aa6.54□□□□□ -1.36
NUP53YMR153W NAM2P11325 894 aa6.54□□□□□ -1.36
NUP53YMR153W HNM1P19807 563 aa6.54□□□□□ -1.36
NUP53YMR153W FUN19P28003 413 aaPredicted RBP6.54□□□□□ -1.36
NUP53YMR153W SAM50P53969 484 aa6.54□□□□□ -1.36
NUP53YMR153W GRX5Q02784 150 aa6.54□□□□□ -1.36
NUP53YMR153W GPI17Q04080 534 aa6.54□□□□□ -1.36
NUP53YMR153W GMC1Q04399 608 aa6.54□□□□□ -1.36
NUP53YMR153W RDL1Q12305 139 aaKnown RBP6.54□□□□□ -1.36
NUP53YMR153W YGR161W-CQ3E744 92 aa6.54□□□□□ -1.36
NUP53YMR153W YPL119C-AQ3E751 87 aa6.54□□□□□ -1.36
NUP53YMR153W TDH3P00359 332 aaKnown RBP RIP-Chip data6.53□□□□□ -1.36not detected
NUP53YMR153W YML003WP0CF16 290 aa6.53□□□□□ -1.36
NUP53YMR153W MSI1P13712 422 aa6.53□□□□□ -1.36
NUP53YMR153W NDC1P32500 655 aa6.53□□□□□ -1.36
NUP53YMR153W PRP21P32524 280 aaPredicted RBP6.53□□□□□ -1.36
NUP53YMR153W MCH2P36032 473 aa6.53□□□□□ -1.36
NUP53YMR153W AIM10P39965 576 aaKnown RBP6.53□□□□□ -1.36
NUP53YMR153W ATF1P40353 525 aa6.53□□□□□ -1.36
NUP53YMR153W GLR1P41921 483 aaKnown RBP6.53□□□□□ -1.36
NUP53YMR153W CTK2P46962 323 aa6.53□□□□□ -1.36
NUP53YMR153W PEF1P53238 335 aa6.53□□□□□ -1.36
NUP53YMR153W YNL046WP53956 172 aa6.53□□□□□ -1.36
NUP53YMR153W YMR087WQ04299 284 aa6.53□□□□□ -1.36
NUP53YMR153W ARP10Q04549 284 aa6.53□□□□□ -1.36
NUP53YMR153W RBS1Q05672 457 aaKnown RBP6.53□□□□□ -1.36
NUP53YMR153W YPR196WQ06595 470 aa6.53□□□□□ -1.36
NUP53YMR153W MEU1Q07938 337 aaKnown RBP RIP-Chip data6.53□□□□□ -1.36not detected
NUP53YMR153W FRE8Q12209 686 aa6.53□□□□□ -1.36
NUP53YMR153W YGL041W-AP0C5N3 154 aa6.52□□□□□ -1.37
NUP53YMR153W RPS5P26783 225 aaKnown RBP6.52□□□□□ -1.37
NUP53YMR153W ECT1P33412 323 aa6.52□□□□□ -1.37
NUP53YMR153W FAT1P38225 669 aa6.52□□□□□ -1.37
NUP53YMR153W MDM31P38880 579 aa6.52□□□□□ -1.37
NUP53YMR153W SNA4Q07549 140 aa6.52□□□□□ -1.37
NUP53YMR153W CSI2Q08054 341 aa6.52□□□□□ -1.37
NUP53YMR153W CCW14O13547 238 aa6.51□□□□□ -1.37
NUP53YMR153W RPL39P04650 51 aa6.51□□□□□ -1.37
NUP53YMR153W RPA135P22138 1203 aaKnown RBP6.51□□□□□ -1.37
NUP53YMR153W PUB1P32588 453 aaKnown RBP RIP-Chip data6.51□□□□□ -1.37not detected
NUP53YMR153W SDS22P36047 338 aa6.51□□□□□ -1.37
NUP53YMR153W ANR2P36090 516 aaPredicted RBP6.51□□□□□ -1.37
NUP53YMR153W FRM2P37261 193 aa6.51□□□□□ -1.37
NUP53YMR153W TAT1P38085 619 aa6.51□□□□□ -1.37
NUP53YMR153W SHE1P38200 338 aa6.51□□□□□ -1.37
NUP53YMR153W PUG1P40100 303 aa6.51□□□□□ -1.37
NUP53YMR153W OST1P41543 476 aaKnown RBP6.51□□□□□ -1.37
NUP53YMR153W YHC3P47040 408 aa6.51□□□□□ -1.37
NUP53YMR153W BNA2P47125 453 aa6.51□□□□□ -1.37
NUP53YMR153W PPT1P53043 513 aa6.51□□□□□ -1.37
NUP53YMR153W TYW3P53177 273 aa6.51□□□□□ -1.37
NUP53YMR153W MTL1P53214 551 aa6.51□□□□□ -1.37
NUP53YMR153W YNR048WP53740 393 aa6.51□□□□□ -1.37
NUP53YMR153W SSK1Q07084 712 aa6.51□□□□□ -1.37
NUP53YMR153W VCX1Q99385 411 aa6.51□□□□□ -1.37
NUP53YMR153W PUT3P25502 979 aaPredicted RBP6.5□□□□□ -1.37
NUP53YMR153W RPB9P27999 122 aa6.5□□□□□ -1.37
NUP53YMR153W DEG1P31115 442 aaKnown RBP6.5□□□□□ -1.37
NUP53YMR153W FMC1P40491 155 aa6.5□□□□□ -1.37
NUP53YMR153W YDC1Q02896 317 aa6.5□□□□□ -1.37
NUP53YMR153W YDR514CQ04408 483 aa6.5□□□□□ -1.37
NUP53YMR153W GAL83Q04739 417 aa6.5□□□□□ -1.37
NUP53YMR153W YLR108CQ12259 485 aa6.5□□□□□ -1.37
NUP53YMR153W YCL048W-AQ2V2Q2 79 aa6.5□□□□□ -1.37
NUP53YMR153W ENA1P13587 1091 aa6.5□□□□□ -1.37
NUP53YMR153W ARC40P38328 384 aaKnown RBP6.5□□□□□ -1.37
NUP53YMR153W YLF2P38746 405 aa6.5□□□□□ -1.37
NUP53YMR153W CTR2P38865 189 aa6.5□□□□□ -1.37
NUP53YMR153W EGD2P38879 174 aaKnown RBP6.5□□□□□ -1.37
NUP53YMR153W SOP4P39543 234 aaPredicted RBP6.5□□□□□ -1.37
NUP53YMR153W ABM1P47146 123 aa6.5□□□□□ -1.37
NUP53YMR153W CCC1P47818 322 aa6.5□□□□□ -1.37
NUP53YMR153W AAH1P53909 347 aa6.5□□□□□ -1.37
NUP53YMR153W NRK1P53915 240 aa6.5□□□□□ -1.37
NUP53YMR153W ENA2Q01896 1091 aa6.5□□□□□ -1.37
NUP53YMR153W YPR098CQ06089 161 aa6.5□□□□□ -1.37
NUP53YMR153W AIR2Q12476 344 aaKnown RBP6.5□□□□□ -1.37
NUP53YMR153W ENA5Q12691 1091 aa6.5□□□□□ -1.37
NUP53YMR153W SOD2P00447 233 aa6.49□□□□□ -1.37
NUP53YMR153W YBR285WP38354 144 aa6.49□□□□□ -1.37
NUP53YMR153W SSZ1P38788 538 aaKnown RBP6.49□□□□□ -1.37
NUP53YMR153W DLS1P40366 167 aa6.49□□□□□ -1.37
NUP53YMR153W SLD3P53135 668 aa6.49□□□□□ -1.37
NUP53YMR153W SMM1P53720 384 aaKnown RBP6.49□□□□□ -1.37
NUP53YMR153W NOG1Q02892 647 aaKnown RBP6.49□□□□□ -1.37
NUP53YMR153W DLT1Q04216 342 aa6.49□□□□□ -1.37
NUP53YMR153W RNH1Q04740 348 aa6.49□□□□□ -1.37
NUP53YMR153W YLR346CQ06139 101 aa6.49□□□□□ -1.37
NUP53YMR153W YLR173WQ06247 608 aa6.49□□□□□ -1.37
NUP53YMR153W TPO3Q06451 622 aa6.49□□□□□ -1.37
NUP53YMR153W USB1Q12208 290 aaKnown RBP6.49□□□□□ -1.37
NUP53YMR153W YGK3Q12222 375 aaPredicted RBP6.49□□□□□ -1.37
NUP53YMR153W RPL30P14120 105 aaKnown RBP6.48□□□□□ -1.37
NUP53YMR153W ECM4P36156 370 aa6.48□□□□□ -1.37
NUP53YMR153W YER188WP40103 239 aa6.48□□□□□ -1.37
NUP53YMR153W AIR1P40507 360 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms