RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W PUT1P09368 476 aa3.46□□□□□ -1.86
ECM16YMR128W CDC23P16522 626 aa3.46□□□□□ -1.86
ECM16YMR128W MRP17P28778 131 aa3.46□□□□□ -1.86
ECM16YMR128W MAL32P38158 584 aa3.46□□□□□ -1.86
ECM16YMR128W HIS6P40545 261 aa3.46□□□□□ -1.86
ECM16YMR128W TAX4P47030 604 aa3.46□□□□□ -1.86
ECM16YMR128W LYS20P48570 428 aaKnown RBP3.46□□□□□ -1.86
ECM16YMR128W MAL12P53341 584 aa3.46□□□□□ -1.86
ECM16YMR128W HXT11P54862 567 aa3.46□□□□□ -1.86
ECM16YMR128W NRG1Q03125 231 aa3.46□□□□□ -1.86
ECM16YMR128W YMR310CQ04867 317 aaPredicted RBP3.46□□□□□ -1.86
ECM16YMR128W FMP40Q08968 688 aaPredicted RBP3.46□□□□□ -1.86
ECM16YMR128W YOL163WP0CF20 169 aa3.46□□□□□ -1.86
ECM16YMR128W STE12P13574 688 aa3.46□□□□□ -1.86
ECM16YMR128W MRS4P23500 304 aa3.46□□□□□ -1.86
ECM16YMR128W PUT3P25502 979 aaPredicted RBP3.46□□□□□ -1.86
ECM16YMR128W ADE1P27616 306 aa3.46□□□□□ -1.86
ECM16YMR128W CNE1P27825 502 aa3.46□□□□□ -1.86
ECM16YMR128W PAU2P32612 120 aa3.46□□□□□ -1.86
ECM16YMR128W ORC2P32833 620 aa3.46□□□□□ -1.86
ECM16YMR128W YHR097CP38809 366 aaKnown RBP3.46□□□□□ -1.86
ECM16YMR128W SDP1P40479 209 aa3.46□□□□□ -1.86
ECM16YMR128W YGL117WP53133 265 aa3.46□□□□□ -1.86
ECM16YMR128W TAZ1Q06510 381 aa3.46□□□□□ -1.86
ECM16YMR128W FRE6Q12473 712 aa3.46□□□□□ -1.86
ECM16YMR128W PNO1Q99216 274 aaKnown RBP3.46□□□□□ -1.86
ECM16YMR128W HOM2P13663 365 aaKnown RBP3.45□□□□□ -1.86
ECM16YMR128W FRS1P15624 595 aaKnown RBP3.45□□□□□ -1.86
ECM16YMR128W FUR1P18562 216 aaKnown RBP3.45□□□□□ -1.86
ECM16YMR128W KRR1P25586 316 aaPredicted RBP3.45□□□□□ -1.86
ECM16YMR128W KRE6P32486 720 aa3.45□□□□□ -1.86
ECM16YMR128W YPL014WQ02606 381 aa3.45□□□□□ -1.86
ECM16YMR128W YMR178WQ03219 274 aaKnown RBP3.45□□□□□ -1.86
ECM16YMR128W TPO4Q12256 659 aa3.45□□□□□ -1.86
ECM16YMR128W DOA1P36037 715 aa3.45□□□□□ -1.86
ECM16YMR128W RRN10P38204 145 aa3.45□□□□□ -1.86
ECM16YMR128W BUD8P41698 603 aa3.45□□□□□ -1.86
ECM16YMR128W UBX6P47049 396 aa3.45□□□□□ -1.86
ECM16YMR128W SWC4P53201 476 aa3.45□□□□□ -1.86
ECM16YMR128W YGR250CP53316 781 aaKnown RBP3.45□□□□□ -1.86
ECM16YMR128W EST3Q03096 181 aa3.45□□□□□ -1.86
ECM16YMR128W NAT4Q04751 285 aa3.45□□□□□ -1.86
ECM16YMR128W YMR315WQ04869 349 aaKnown RBP3.45□□□□□ -1.86
ECM16YMR128W TRM13Q12383 476 aa3.45□□□□□ -1.86
ECM16YMR128W AI1P03875 834 aa3.45□□□□□ -1.86
ECM16YMR128W HIP1P06775 603 aa3.45□□□□□ -1.86
ECM16YMR128W PTP1P25044 335 aa3.45□□□□□ -1.86
ECM16YMR128W NRP1P32770 719 aaKnown RBP RIP-Chip data3.45□□□□□ -1.86not detected
ECM16YMR128W GCV3P39726 170 aaPredicted RBP3.45□□□□□ -1.86
ECM16YMR128W OTU1P43558 301 aa3.45□□□□□ -1.86
ECM16YMR128W YJL016WP47072 561 aa3.45□□□□□ -1.86
ECM16YMR128W YNR071CP53757 342 aa3.45□□□□□ -1.86
ECM16YMR128W ARG5,6Q01217 863 aa3.45□□□□□ -1.86
ECM16YMR128W SEN15Q04675 128 aa3.45□□□□□ -1.86
ECM16YMR128W TFC7Q12415 435 aa3.45□□□□□ -1.86
ECM16YMR128W TDH1P00360 332 aaKnown RBP3.44□□□□□ -1.86
ECM16YMR128W MRP1P10662 321 aaKnown RBP3.44□□□□□ -1.86
ECM16YMR128W LDS1P31379 325 aa3.44□□□□□ -1.86
ECM16YMR128W ECT1P33412 323 aa3.44□□□□□ -1.86
ECM16YMR128W PRS3P38689 320 aaKnown RBP3.44□□□□□ -1.86
ECM16YMR128W HEM14P40012 539 aa3.44□□□□□ -1.86
ECM16YMR128W YIR035CP40579 254 aa3.44□□□□□ -1.86
ECM16YMR128W PMT6P42934 759 aa3.44□□□□□ -1.86
ECM16YMR128W YIP4P53093 235 aa3.44□□□□□ -1.86
ECM16YMR128W PEF1P53238 335 aa3.44□□□□□ -1.86
ECM16YMR128W YDL086WQ07505 273 aa3.44□□□□□ -1.86
ECM16YMR128W YKL033W-AQ86ZR7 236 aa3.44□□□□□ -1.86
ECM16YMR128W CPR2P23285 205 aa3.44□□□□□ -1.86
ECM16YMR128W AGA2P32781 87 aa3.44□□□□□ -1.86
ECM16YMR128W YKL162CP36052 402 aa3.44□□□□□ -1.86
ECM16YMR128W AUR1P36107 401 aaPredicted RBP3.44□□□□□ -1.86
ECM16YMR128W YKR073CP36153 106 aa3.44□□□□□ -1.86
ECM16YMR128W BFR1P38934 470 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86 RIP-Chip
ECM16YMR128W GET2P40056 285 aa3.44□□□□□ -1.86
ECM16YMR128W GTT1P40582 234 aa3.44□□□□□ -1.86
ECM16YMR128W ARL3Q02804 198 aa3.44□□□□□ -1.86
ECM16YMR128W TMN2Q04562 672 aa3.44□□□□□ -1.86
ECM16YMR128W ATG10Q07879 167 aa3.44□□□□□ -1.86
ECM16YMR128W TGL5Q12043 749 aa3.44□□□□□ -1.86
ECM16YMR128W SET6Q12529 373 aa3.44□□□□□ -1.86
ECM16YMR128W IRA2P19158 3079 aa3.44□□□□□ -1.86
ECM16YMR128W SGA1P08019 549 aa3.44□□□□□ -1.86
ECM16YMR128W KIN3P22209 435 aa3.44□□□□□ -1.86
ECM16YMR128W SFK1P35735 353 aa3.44□□□□□ -1.86
ECM16YMR128W HRB1P38922 454 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
ECM16YMR128W GIM4P40005 111 aaKnown RBP3.44□□□□□ -1.86
ECM16YMR128W BMT5P40493 336 aa3.44□□□□□ -1.86
ECM16YMR128W YIL077CP40508 320 aa3.44□□□□□ -1.86
ECM16YMR128W AGE2P40529 298 aa3.44□□□□□ -1.86
ECM16YMR128W NAS2P40555 220 aa3.44□□□□□ -1.86
ECM16YMR128W YGR035CP53222 116 aa3.44□□□□□ -1.86
ECM16YMR128W YAP1802P53309 568 aa3.44□□□□□ -1.86
ECM16YMR128W HHO1P53551 258 aa3.44□□□□□ -1.86
ECM16YMR128W YMR084WA2P2R3 262 aa3.43□□□□□ -1.86
ECM16YMR128W CBS1P14066 229 aa3.43□□□□□ -1.86
ECM16YMR128W MTF1P14908 341 aaKnown RBP3.43□□□□□ -1.86
ECM16YMR128W IMG2P25642 146 aaPredicted RBP3.43□□□□□ -1.86
ECM16YMR128W IKI1P38874 309 aa3.43□□□□□ -1.86
ECM16YMR128W VPS52P39904 641 aa3.43□□□□□ -1.86
ECM16YMR128W YNL208WP40159 199 aaKnown RBP3.43□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 59.9 ms