RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM3, Length 270 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM3	YLR438C-A	ACS2	P52910	683 aa	Known RBP	11.18	□□□□□ -0.62
LSM3	YLR438C-A	PCP1	P53259	346 aa		11.18	□□□□□ -0.62
LSM3	YLR438C-A	ALG12	P53730	551 aa		11.18	□□□□□ -0.62
LSM3	YLR438C-A	YNL165W	P53891	406 aa		11.18	□□□□□ -0.62
LSM3	YLR438C-A	HLR1	Q04429	423 aa		11.18	□□□□□ -0.62
LSM3	YLR438C-A	PRP8	P33334	2413 aa	Known RBP	11.17	□□□□□ -0.62
LSM3	YLR438C-A	QCR7	P00128	127 aa		11.17	□□□□□ -0.62
LSM3	YLR438C-A	HEM4	P06174	275 aa		11.17	□□□□□ -0.62
LSM3	YLR438C-A	NAM2	P11325	894 aa		11.17	□□□□□ -0.62
LSM3	YLR438C-A	FRM2	P37261	193 aa		11.17	□□□□□ -0.62
LSM3	YLR438C-A	YBR137W	P38276	179 aa		11.17	□□□□□ -0.62
LSM3	YLR438C-A	PTH1	P38876	190 aa	Known RBP	11.17	□□□□□ -0.62
LSM3	YLR438C-A	GPP1	P41277	250 aa	Known RBP	11.17	□□□□□ -0.62
LSM3	YLR438C-A	ATG18	P43601	500 aa		11.17	□□□□□ -0.62
LSM3	YLR438C-A	YGL204C	P53089	101 aa		11.17	□□□□□ -0.62
LSM3	YLR438C-A	SAM50	P53969	484 aa		11.17	□□□□□ -0.62
LSM3	YLR438C-A	YLR152C	P54072	576 aa		11.17	□□□□□ -0.62
LSM3	YLR438C-A	CRR1	Q05790	422 aa		11.17	□□□□□ -0.62
LSM3	YLR438C-A	MSH5	Q12175	901 aa		11.17	□□□□□ -0.62
LSM3	YLR438C-A	RPN13	O13563	156 aa		11.16	□□□□□ -0.62
LSM3	YLR438C-A	SOD2	P00447	233 aa		11.16	□□□□□ -0.62
LSM3	YLR438C-A	RPL35A	P0CX84	120 aa	Known RBP	11.16	□□□□□ -0.62
LSM3	YLR438C-A	RPL35B	P0CX85	120 aa	Known RBP	11.16	□□□□□ -0.62
LSM3	YLR438C-A	SFK1	P35735	353 aa		11.16	□□□□□ -0.62
LSM3	YLR438C-A	CCZ1	P38273	704 aa		11.16	□□□□□ -0.62
LSM3	YLR438C-A	MTC6	P38849	526 aa		11.16	□□□□□ -0.62
LSM3	YLR438C-A	RCE1	Q03530	315 aa		11.16	□□□□□ -0.62
LSM3	YLR438C-A	SSK1	Q07084	712 aa		11.16	□□□□□ -0.62
LSM3	YLR438C-A	MCT1	Q12283	360 aa		11.16	□□□□□ -0.62
LSM3	YLR438C-A	FOL3	Q12676	427 aa	Predicted RBP	11.16	□□□□□ -0.62
LSM3	YLR438C-A	YBL113C	Q7M4S9	792 aa		11.16	□□□□□ -0.62
LSM3	YLR438C-A	MAK32	P23060	363 aa		11.15	□□□□□ -0.62
LSM3	YLR438C-A	TMA19	P35691	167 aa	Known RBP	11.15	□□□□□ -0.62
LSM3	YLR438C-A	RCN1	P36054	211 aa		11.15	□□□□□ -0.62
LSM3	YLR438C-A	SDS24	P38314	527 aa		11.15	□□□□□ -0.62
LSM3	YLR438C-A	YJL055W	P47044	245 aa		11.15	□□□□□ -0.62
LSM3	YLR438C-A	YJR120W	P47157	116 aa		11.15	□□□□□ -0.62
LSM3	YLR438C-A	SLI1	P53304	468 aa		11.15	□□□□□ -0.62
LSM3	YLR438C-A	PXR1	P53335	271 aa	Predicted RBP	11.15	□□□□□ -0.62
LSM3	YLR438C-A	NRK1	P53915	240 aa		11.15	□□□□□ -0.62
LSM3	YLR438C-A	RSM23	Q01163	450 aa		11.15	□□□□□ -0.62
LSM3	YLR438C-A	RPL6A	Q02326	176 aa	Known RBP	11.15	□□□□□ -0.62
LSM3	YLR438C-A	PEX30	Q06169	523 aa		11.15	□□□□□ -0.62
LSM3	YLR438C-A	THI72	Q08579	599 aa		11.15	□□□□□ -0.62
LSM3	YLR438C-A	PEX27	Q08580	376 aa		11.15	□□□□□ -0.62
LSM3	YLR438C-A	TIR4	Q12218	487 aa	Predicted RBP	11.15	□□□□□ -0.62
LSM3	YLR438C-A	ADK1	P07170	222 aa	Known RBP	11.14	□□□□□ -0.63
LSM3	YLR438C-A	RPS18A	P0CX55	146 aa	Known RBP	11.14	□□□□□ -0.63
LSM3	YLR438C-A	RPS18B	P0CX56	146 aa	Predicted RBP	11.14	□□□□□ -0.63
LSM3	YLR438C-A	PPG1	P32838	368 aa		11.14	□□□□□ -0.63
LSM3	YLR438C-A	YJL016W	P47072	561 aa		11.14	□□□□□ -0.63
LSM3	YLR438C-A	DOC1	P53068	250 aa		11.14	□□□□□ -0.63
LSM3	YLR438C-A	NMA1	Q06178	401 aa	Known RBP	11.14	□□□□□ -0.63
LSM3	YLR438C-A	COX5B	P00425	151 aa		11.13	□□□□□ -0.63
LSM3	YLR438C-A	CLG1	P35190	452 aa		11.13	□□□□□ -0.63
LSM3	YLR438C-A	SSH1	P38353	490 aa	Known RBP	11.13	□□□□□ -0.63
LSM3	YLR438C-A	PUG1	P40100	303 aa		11.13	□□□□□ -0.63
LSM3	YLR438C-A	SER2	P42941	309 aa		11.13	□□□□□ -0.63
LSM3	YLR438C-A	LYS20	P48570	428 aa	Known RBP	11.13	□□□□□ -0.63
LSM3	YLR438C-A	AAH1	P53909	347 aa		11.13	□□□□□ -0.63
LSM3	YLR438C-A	NGL1	Q08213	363 aa	Known RBP	11.13	□□□□□ -0.63
LSM3	YLR438C-A	LYS21	Q12122	440 aa	Known RBP	11.13	□□□□□ -0.63
LSM3	YLR438C-A	IZH2	Q12442	317 aa		11.13	□□□□□ -0.63
LSM3	YLR438C-A	HIS3	P06633	220 aa		11.12	□□□□□ -0.63
LSM3	YLR438C-A	HOM6	P31116	359 aa	Known RBP	11.12	□□□□□ -0.63
LSM3	YLR438C-A	MOB2	P43563	287 aa		11.12	□□□□□ -0.63
LSM3	YLR438C-A	NIT3	P49954	291 aa		11.12	□□□□□ -0.63
LSM3	YLR438C-A	RAI1	P53063	387 aa	Known RBP	11.12	□□□□□ -0.63
LSM3	YLR438C-A	TNA1	P53322	534 aa		11.12	□□□□□ -0.63
LSM3	YLR438C-A	RSM28	Q03430	361 aa		11.12	□□□□□ -0.63
LSM3	YLR438C-A	MSS11	Q03825	758 aa		11.12	□□□□□ -0.63
LSM3	YLR438C-A	ASR1	Q06834	288 aa		11.12	□□□□□ -0.63
LSM3	YLR438C-A	PCL1	P24867	279 aa		11.11	□□□□□ -0.63
LSM3	YLR438C-A	ERG4	P25340	473 aa		11.11	□□□□□ -0.63
LSM3	YLR438C-A	MBA1	P38300	278 aa		11.11	□□□□□ -0.63
LSM3	YLR438C-A	SEN34	P39707	275 aa		11.11	□□□□□ -0.63
LSM3	YLR438C-A	FCY21	P40039	528 aa		11.11	□□□□□ -0.63
LSM3	YLR438C-A	CWC23	P52868	283 aa	Predicted RBP	11.11	□□□□□ -0.63
LSM3	YLR438C-A	GPI17	Q04080	534 aa		11.11	□□□□□ -0.63
LSM3	YLR438C-A	RGC1	Q06108	1083 aa	Known RBP	11.11	□□□□□ -0.63
LSM3	YLR438C-A	MATALPHA1	P0CY06	175 aa		11.1	□□□□□ -0.63
LSM3	YLR438C-A	HMLALPHA1	P0CY07	175 aa		11.1	□□□□□ -0.63
LSM3	YLR438C-A	PDA1	P16387	420 aa	Known RBP	11.1	□□□□□ -0.63
LSM3	YLR438C-A	ZUO1	P32527	433 aa	Known RBP	11.1	□□□□□ -0.63
LSM3	YLR438C-A	MRT4	P33201	236 aa	Known RBP	11.1	□□□□□ -0.63
LSM3	YLR438C-A	ZRT3	P34240	503 aa		11.1	□□□□□ -0.63
LSM3	YLR438C-A	POP6	P53218	158 aa		11.1	□□□□□ -0.63
LSM3	YLR438C-A	FRE3	Q08905	711 aa		11.1	□□□□□ -0.63
LSM3	YLR438C-A	RCN2	Q12044	265 aa		11.1	□□□□□ -0.63
LSM3	YLR438C-A	TGS1	Q12052	315 aa		11.1	□□□□□ -0.63
LSM3	YLR438C-A	TDH3	P00359	332 aa	Known RBP RIP-Chip data	11.09	□□□□□ -0.63	not detected
LSM3	YLR438C-A	MRPS5	P33759	307 aa		11.09	□□□□□ -0.63
LSM3	YLR438C-A	APL3	P38065	1025 aa		11.09	□□□□□ -0.63
LSM3	YLR438C-A	YHK8	P38776	514 aa		11.09	□□□□□ -0.63
LSM3	YLR438C-A	MIT1	P40002	666 aa		11.09	□□□□□ -0.63
LSM3	YLR438C-A	YER084W	P40057	128 aa		11.09	□□□□□ -0.63
LSM3	YLR438C-A	ERJ5	P43613	295 aa	Predicted RBP	11.09	□□□□□ -0.63
LSM3	YLR438C-A	IMD3	P50095	523 aa	Known RBP	11.09	□□□□□ -0.63
LSM3	YLR438C-A	ACS1	Q01574	713 aa		11.09	□□□□□ -0.63
LSM3	YLR438C-A	WTM2	Q12206	467 aa		11.09	□□□□□ -0.63

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