RNA–Protein interactions for RNA: YLR435W

TSR2, Transcript of Protein with a potential role in pre-rRNA processing, yeast

Gene TSR2, Length 618 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSR2	YLR435W	DPB11	P47027	764 aa	Predicted RBP	5.7	□□□□□ -1.5
TSR2	YLR435W	MDE1	P47095	244 aa		5.7	□□□□□ -1.5
TSR2	YLR435W	COX18	P53239	316 aa		5.7	□□□□□ -1.5
TSR2	YLR435W	PGA1	P53896	198 aa		5.7	□□□□□ -1.5
TSR2	YLR435W	ASI3	P53983	676 aa		5.7	□□□□□ -1.5
TSR2	YLR435W	NUP116	Q02630	1113 aa		5.7	□□□□□ -1.5
TSR2	YLR435W	GRX5	Q02784	150 aa		5.7	□□□□□ -1.5
TSR2	YLR435W	SNZ1	Q03148	297 aa		5.7	□□□□□ -1.5
TSR2	YLR435W	HOT1	Q03213	719 aa		5.7	□□□□□ -1.5
TSR2	YLR435W	OST6	Q03723	332 aa		5.7	□□□□□ -1.5
TSR2	YLR435W	API2	Q04413	109 aa		5.7	□□□□□ -1.5
TSR2	YLR435W	RRP9	Q06506	573 aa	Known RBP	5.7	□□□□□ -1.5
TSR2	YLR435W	TAZ1	Q06510	381 aa		5.7	□□□□□ -1.5
TSR2	YLR435W	RNH203	Q12338	110 aa		5.7	□□□□□ -1.5
TSR2	YLR435W	KIN28	P06242	306 aa		5.69	□□□□□ -1.5
TSR2	YLR435W	RPS16A	P0CX51	143 aa	Known RBP	5.69	□□□□□ -1.5
TSR2	YLR435W	RPS16B	P0CX52	143 aa	Known RBP	5.69	□□□□□ -1.5
TSR2	YLR435W	PDA1	P16387	420 aa	Known RBP	5.69	□□□□□ -1.5
TSR2	YLR435W	EXG1	P23776	448 aa	Known RBP	5.69	□□□□□ -1.5
TSR2	YLR435W	CAM1	P29547	415 aa	Known RBP	5.69	□□□□□ -1.5
TSR2	YLR435W	YHL037C	P38733	133 aa		5.69	□□□□□ -1.5
TSR2	YLR435W	GAT2	P40209	560 aa		5.69	□□□□□ -1.5
TSR2	YLR435W	YMR144W	P40214	342 aa	Known RBP	5.69	□□□□□ -1.5
TSR2	YLR435W	AVT7	P40501	490 aa		5.69	□□□□□ -1.5
TSR2	YLR435W	YMD8	Q03697	442 aa		5.69	□□□□□ -1.5
TSR2	YLR435W	BNA7	Q04066	261 aa		5.69	□□□□□ -1.5
TSR2	YLR435W	MIM1	Q08176	113 aa		5.69	□□□□□ -1.5
TSR2	YLR435W	NCE102	Q12207	173 aa	RIP-Chip data	5.69	□□□□□ -1.5	not detected
TSR2	YLR435W	DBP10	Q12389	995 aa	Known RBP	5.69	□□□□□ -1.5
TSR2	YLR435W	OPI3	P05375	206 aa		5.68	□□□□□ -1.5
TSR2	YLR435W	PRB1	P09232	635 aa		5.68	□□□□□ -1.5
TSR2	YLR435W	SPO7	P18410	259 aa		5.68	□□□□□ -1.5
TSR2	YLR435W	OAC1	P32332	324 aa		5.68	□□□□□ -1.5
TSR2	YLR435W	PHO90	P39535	881 aa		5.68	□□□□□ -1.5
TSR2	YLR435W	LSM4	P40070	187 aa	Known RBP	5.68	□□□□□ -1.5
TSR2	YLR435W	POP1	P41812	875 aa		5.68	□□□□□ -1.5
TSR2	YLR435W	MRPL19	P53875	158 aa		5.68	□□□□□ -1.5
TSR2	YLR435W	NUP49	Q02199	472 aa		5.68	□□□□□ -1.5
TSR2	YLR435W	RCE1	Q03530	315 aa		5.68	□□□□□ -1.5
TSR2	YLR435W	YLR345W	Q06137	509 aa		5.68	□□□□□ -1.5
TSR2	YLR435W	IPK1	Q06667	281 aa		5.68	□□□□□ -1.5
TSR2	YLR435W	YPL119C-A	Q3E751	87 aa		5.68	□□□□□ -1.5
TSR2	YLR435W	RPL35A	P0CX84	120 aa	Known RBP	5.67	□□□□□ -1.5
TSR2	YLR435W	RPL35B	P0CX85	120 aa	Known RBP	5.67	□□□□□ -1.5
TSR2	YLR435W	STE18	P18852	110 aa		5.67	□□□□□ -1.5
TSR2	YLR435W	KRR1	P25586	316 aa	Predicted RBP	5.67	□□□□□ -1.5
TSR2	YLR435W	ITR1	P30605	584 aa		5.67	□□□□□ -1.5
TSR2	YLR435W	PPG1	P32838	368 aa		5.67	□□□□□ -1.5
TSR2	YLR435W	MAL32	P38158	584 aa		5.67	□□□□□ -1.5
TSR2	YLR435W	YBR220C	P38318	560 aa		5.67	□□□□□ -1.5
TSR2	YLR435W	VBA2	P38358	474 aa	Known RBP	5.67	□□□□□ -1.5
TSR2	YLR435W	YER084W	P40057	128 aa		5.67	□□□□□ -1.5
TSR2	YLR435W	SFH5	P47008	294 aa		5.67	□□□□□ -1.5
TSR2	YLR435W	RMD9	P53140	646 aa	Known RBP	5.67	□□□□□ -1.5
TSR2	YLR435W	MAL12	P53341	584 aa		5.67	□□□□□ -1.5
TSR2	YLR435W	INN1	P53901	409 aa		5.67	□□□□□ -1.5
TSR2	YLR435W	TIM10	P87108	93 aa		5.67	□□□□□ -1.5
TSR2	YLR435W	YDL114W	Q07530	308 aa		5.67	□□□□□ -1.5
TSR2	YLR435W	URA2	P07259	2214 aa	Known RBP	5.66	□□□□□ -1.5
TSR2	YLR435W	URE2	P23202	354 aa	Known RBP	5.66	□□□□□ -1.5
TSR2	YLR435W	STE50	P25344	346 aa		5.66	□□□□□ -1.5
TSR2	YLR435W	YKL187C	P34231	750 aa		5.66	□□□□□ -1.5
TSR2	YLR435W	PRS3	P38689	320 aa	Known RBP	5.66	□□□□□ -1.5
TSR2	YLR435W	MLH1	P38920	769 aa		5.66	□□□□□ -1.5
TSR2	YLR435W	PIG2	P40187	538 aa		5.66	□□□□□ -1.5
TSR2	YLR435W	VMA10	P48836	114 aa	Known RBP	5.66	□□□□□ -1.5
TSR2	YLR435W	NQM1	P53228	333 aa	Predicted RBP	5.66	□□□□□ -1.5
TSR2	YLR435W	VOA1	P53262	265 aa		5.66	□□□□□ -1.5
TSR2	YLR435W	COG5	P53951	403 aa		5.66	□□□□□ -1.5
TSR2	YLR435W	ACS1	Q01574	713 aa		5.66	□□□□□ -1.5
TSR2	YLR435W	RPL6A	Q02326	176 aa	Known RBP	5.66	□□□□□ -1.5
TSR2	YLR435W	PET191	Q02772	108 aa		5.66	□□□□□ -1.5
TSR2	YLR435W	RVB1	Q03940	463 aa	Known RBP	5.66	□□□□□ -1.5
TSR2	YLR435W	TMC1	Q08422	150 aa	Predicted RBP	5.66	□□□□□ -1.5
TSR2	YLR435W	RKM1	Q08961	583 aa	Predicted RBP	5.66	□□□□□ -1.5
TSR2	YLR435W	YOR289W	Q12012	251 aa	Predicted RBP	5.66	□□□□□ -1.5
TSR2	YLR435W	MCT1	Q12283	360 aa		5.66	□□□□□ -1.5
TSR2	YLR435W	NDC1	P32500	655 aa		5.65	□□□□□ -1.5
TSR2	YLR435W	YME2	P32843	850 aa		5.65	□□□□□ -1.5
TSR2	YLR435W	RPC34	P32910	317 aa		5.65	□□□□□ -1.5
TSR2	YLR435W	AIM10	P39965	576 aa	Known RBP	5.65	□□□□□ -1.5
TSR2	YLR435W	PFS2	P42841	465 aa	Known RBP	5.65	□□□□□ -1.5
TSR2	YLR435W	RET2	P43621	546 aa		5.65	□□□□□ -1.5
TSR2	YLR435W	SIP18	P50263	79 aa		5.65	□□□□□ -1.5
TSR2	YLR435W	YGR151C	P53287	111 aa		5.65	□□□□□ -1.5
TSR2	YLR435W	YPL077C	Q02831	240 aa		5.65	□□□□□ -1.5
TSR2	YLR435W	MLC2	Q06580	163 aa		5.65	□□□□□ -1.5
TSR2	YLR435W	SYC1	Q08553	188 aa	Predicted RBP	5.65	□□□□□ -1.5
TSR2	YLR435W	YOR378W	Q08902	515 aa		5.65	□□□□□ -1.5
TSR2	YLR435W	SIA1	Q12212	622 aa		5.65	□□□□□ -1.5
TSR2	YLR435W	PST2	Q12335	198 aa	Known RBP	5.65	□□□□□ -1.5
TSR2	YLR435W	MSW1	P04803	379 aa		5.64	□□□□□ -1.51
TSR2	YLR435W	PHO80	P20052	293 aa		5.64	□□□□□ -1.51
TSR2	YLR435W	FAR1	P21268	830 aa		5.64	□□□□□ -1.51
TSR2	YLR435W	YBR285W	P38354	144 aa		5.64	□□□□□ -1.51
TSR2	YLR435W	YHR035W	P38769	630 aa		5.64	□□□□□ -1.51
TSR2	YLR435W	YER184C	P39961	794 aa		5.64	□□□□□ -1.51
TSR2	YLR435W	HIS6	P40545	261 aa		5.64	□□□□□ -1.51
TSR2	YLR435W	COS10	P52924	374 aa		5.64	□□□□□ -1.51
TSR2	YLR435W	SAY1	P53324	424 aa		5.64	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 84.5 ms