RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W LAG2Q92325 660 aa3.99□□□□□ -1.77
VPS36YLR417W ADE6P38972 1358 aaKnown RBP3.99□□□□□ -1.77
VPS36YLR417W ASP3-2P0CX77 362 aa3.98□□□□□ -1.77
VPS36YLR417W ASP3-3P0CX78 362 aa3.98□□□□□ -1.77
VPS36YLR417W ASP3-4P0CX79 362 aa3.98□□□□□ -1.77
VPS36YLR417W MATALPHA2P0CY08 210 aa3.98□□□□□ -1.77
VPS36YLR417W HMLALPHA2P0CY09 210 aa3.98□□□□□ -1.77
VPS36YLR417W ASP3-1P0CZ17 362 aa3.98□□□□□ -1.77
VPS36YLR417W VPS1P21576 704 aaKnown RBP3.98□□□□□ -1.77
VPS36YLR417W SKI2P35207 1287 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
VPS36YLR417W TAE1P38340 232 aa3.98□□□□□ -1.77
VPS36YLR417W PRE5P40302 234 aaKnown RBP3.98□□□□□ -1.77
VPS36YLR417W GMC1Q04399 608 aa3.98□□□□□ -1.77
VPS36YLR417W TAZ1Q06510 381 aa3.98□□□□□ -1.77
VPS36YLR417W MIM1Q08176 113 aa3.98□□□□□ -1.77
VPS36YLR417W SGT2Q12118 346 aaKnown RBP3.98□□□□□ -1.77
VPS36YLR417W USO1P25386 1790 aa3.98□□□□□ -1.77
VPS36YLR417W GGC1P38988 300 aa3.98□□□□□ -1.77
VPS36YLR417W COA1P40452 197 aa3.98□□□□□ -1.77
VPS36YLR417W YJR079WP47126 109 aa3.98□□□□□ -1.77
VPS36YLR417W YNL134CP53912 376 aaKnown RBP3.98□□□□□ -1.77
VPS36YLR417W YLR152CP54072 576 aa3.98□□□□□ -1.77
VPS36YLR417W TPS1Q00764 495 aaKnown RBP3.98□□□□□ -1.77
VPS36YLR417W RPL21AQ02753 160 aaKnown RBP3.98□□□□□ -1.77
VPS36YLR417W SPC24Q04477 213 aa3.98□□□□□ -1.77
VPS36YLR417W TMC1Q08422 150 aaPredicted RBP3.98□□□□□ -1.77
VPS36YLR417W DAL82P21705 255 aa3.97□□□□□ -1.77
VPS36YLR417W SPT4P32914 102 aaPredicted RBP3.97□□□□□ -1.77
VPS36YLR417W CSE1P33307 960 aa3.97□□□□□ -1.77
VPS36YLR417W NPT1P39683 429 aaKnown RBP3.97□□□□□ -1.77
VPS36YLR417W VAB2P40003 282 aa3.97□□□□□ -1.77
VPS36YLR417W YIL001WP40560 513 aa3.97□□□□□ -1.77
VPS36YLR417W HIT1P46973 164 aa3.97□□□□□ -1.77
VPS36YLR417W YPS5P53057 165 aa3.97□□□□□ -1.77
VPS36YLR417W ALG11P53954 548 aaKnown RBP3.97□□□□□ -1.77
VPS36YLR417W KTR6P54070 446 aa3.97□□□□□ -1.77
VPS36YLR417W INP2Q03824 705 aa3.97□□□□□ -1.77
VPS36YLR417W PEX30Q06169 523 aa3.97□□□□□ -1.77
VPS36YLR417W VIK1Q12045 647 aa3.97□□□□□ -1.77
VPS36YLR417W RRT12P25381 491 aa3.96□□□□□ -1.78
VPS36YLR417W TIP20P33891 701 aa3.96□□□□□ -1.78
VPS36YLR417W SRL4Q03085 281 aa3.96□□□□□ -1.78
VPS36YLR417W BOP2Q06150 570 aa3.96□□□□□ -1.78
VPS36YLR417W TY3A-GQ12173 290 aa3.96□□□□□ -1.78
VPS36YLR417W TY3A-IQ99219 290 aa3.96□□□□□ -1.78
VPS36YLR417W SAC3P46674 1301 aa3.96□□□□□ -1.78
VPS36YLR417W JIP3O13555 125 aa3.95□□□□□ -1.78
VPS36YLR417W HIS1P00498 297 aaKnown RBP3.95□□□□□ -1.78
VPS36YLR417W RPS24AP0CX31 135 aaKnown RBP3.95□□□□□ -1.78
VPS36YLR417W RPS24BP0CX32 135 aaKnown RBP3.95□□□□□ -1.78
VPS36YLR417W CWP1P28319 239 aa3.95□□□□□ -1.78
VPS36YLR417W SPS19P32573 292 aaKnown RBP3.95□□□□□ -1.78
VPS36YLR417W MRPL6P32904 214 aa3.95□□□□□ -1.78
VPS36YLR417W UBC6P33296 250 aaPredicted RBP3.95□□□□□ -1.78
VPS36YLR417W HSM3P38348 480 aa3.95□□□□□ -1.78
VPS36YLR417W TAD2P47058 250 aa3.95□□□□□ -1.78
VPS36YLR417W PGU1P47180 361 aa3.95□□□□□ -1.78
VPS36YLR417W MRPS16Q02608 121 aa3.95□□□□□ -1.78
VPS36YLR417W ADH6Q04894 360 aaKnown RBP3.95□□□□□ -1.78
VPS36YLR417W YOR292CQ08743 309 aa3.95□□□□□ -1.78
VPS36YLR417W YBL111CQ3E7Y5 667 aa3.95□□□□□ -1.78
VPS36YLR417W APC1P53886 1748 aa3.95□□□□□ -1.78
VPS36YLR417W EPT1P22140 391 aa3.95□□□□□ -1.78
VPS36YLR417W AEP1P32493 518 aa3.95□□□□□ -1.78
VPS36YLR417W CYM1P32898 989 aa3.95□□□□□ -1.78
VPS36YLR417W MRPL27P36526 146 aaPredicted RBP3.95□□□□□ -1.78
VPS36YLR417W YHR045WP38775 560 aa3.95□□□□□ -1.78
VPS36YLR417W MIC19P43594 170 aa3.95□□□□□ -1.78
VPS36YLR417W BNA6P43619 295 aa3.95□□□□□ -1.78
VPS36YLR417W TPN1P53099 579 aa3.95□□□□□ -1.78
VPS36YLR417W API2Q04413 109 aa3.95□□□□□ -1.78
VPS36YLR417W DPP1Q05521 289 aa3.95□□□□□ -1.78
VPS36YLR417W SFH1Q06168 426 aa3.95□□□□□ -1.78
VPS36YLR417W YDR018CQ12185 396 aa3.95□□□□□ -1.78
VPS36YLR417W MRP1P10662 321 aaKnown RBP3.94□□□□□ -1.78
VPS36YLR417W HSP26P15992 214 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
VPS36YLR417W BMH1P29311 267 aaKnown RBP3.94□□□□□ -1.78
VPS36YLR417W SUA5P32579 426 aa3.94□□□□□ -1.78
VPS36YLR417W SMP1P38128 452 aa3.94□□□□□ -1.78
VPS36YLR417W SDS24P38314 527 aa3.94□□□□□ -1.78
VPS36YLR417W DDI1P40087 428 aa3.94□□□□□ -1.78
VPS36YLR417W FMC1P40491 155 aa3.94□□□□□ -1.78
VPS36YLR417W VEL1P53058 206 aa3.94□□□□□ -1.78
VPS36YLR417W TRM44Q02648 567 aaKnown RBP3.94□□□□□ -1.78
VPS36YLR417W VHS1Q03785 461 aa3.94□□□□□ -1.78
VPS36YLR417W TAF9Q05027 157 aa3.94□□□□□ -1.78
VPS36YLR417W BSC6Q08280 497 aa3.94□□□□□ -1.78
VPS36YLR417W RIO1Q12196 484 aaKnown RBP3.94□□□□□ -1.78
VPS36YLR417W LDB16P25587 256 aa3.93□□□□□ -1.78
VPS36YLR417W GPX1P36014 167 aa3.93□□□□□ -1.78
VPS36YLR417W PRS4P38063 326 aaPredicted RBP3.93□□□□□ -1.78
VPS36YLR417W YGL262WP53054 175 aa3.93□□□□□ -1.78
VPS36YLR417W FMP48P53233 369 aa3.93□□□□□ -1.78
VPS36YLR417W YNL040WP53960 456 aaPredicted RBP3.93□□□□□ -1.78
VPS36YLR417W HAL1Q01766 294 aa3.93□□□□□ -1.78
VPS36YLR417W SEC13Q04491 297 aaKnown RBP3.93□□□□□ -1.78
VPS36YLR417W FAR8Q05040 523 aa3.93□□□□□ -1.78
VPS36YLR417W SDO1Q07953 250 aaKnown RBP3.93□□□□□ -1.78
VPS36YLR417W YOR114WQ12219 294 aa3.93□□□□□ -1.78
VPS36YLR417W IES3Q12345 250 aa3.93□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms