RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C SLM5P25345 492 aaKnown RBP2.65□□□□□ -1.99
SDO1YLR022C NTG1P31378 399 aa2.65□□□□□ -1.99
SDO1YLR022C VMA11P32842 164 aa2.65□□□□□ -1.99
SDO1YLR022C DOA1P36037 715 aa2.65□□□□□ -1.99
SDO1YLR022C MTC6P38849 526 aa2.65□□□□□ -1.99
SDO1YLR022C SCC4P40090 624 aa2.65□□□□□ -1.99
SDO1YLR022C YIL001WP40560 513 aa2.65□□□□□ -1.99
SDO1YLR022C GWT1P47026 490 aa2.65□□□□□ -1.99
SDO1YLR022C BOL2P53082 120 aa2.65□□□□□ -1.99
SDO1YLR022C PCP1P53259 346 aa2.65□□□□□ -1.99
SDO1YLR022C VPS71Q03433 280 aa2.65□□□□□ -1.99
SDO1YLR022C BUR2Q05949 395 aa2.65□□□□□ -1.99
SDO1YLR022C THP1Q08231 455 aa2.65□□□□□ -1.99
SDO1YLR022C RKM1Q08961 583 aaPredicted RBP2.65□□□□□ -1.99
SDO1YLR022C YPL245WQ12179 454 aaKnown RBP2.65□□□□□ -1.99
SDO1YLR022C RPL35AP0CX84 120 aaKnown RBP2.64□□□□□ -1.99
SDO1YLR022C RPL35BP0CX85 120 aaKnown RBP2.64□□□□□ -1.99
SDO1YLR022C UTR1P21373 530 aa2.64□□□□□ -1.99
SDO1YLR022C RHB1P25378 209 aa2.64□□□□□ -1.99
SDO1YLR022C FUN19P28003 413 aaPredicted RBP2.64□□□□□ -1.99
SDO1YLR022C SRB4P32569 687 aa2.64□□□□□ -1.99
SDO1YLR022C SPO73P40031 143 aa2.64□□□□□ -1.99
SDO1YLR022C PRE5P40302 234 aaKnown RBP2.64□□□□□ -1.99
SDO1YLR022C MOB2P43563 287 aa2.64□□□□□ -1.99
SDO1YLR022C YFL012WP43580 148 aa2.64□□□□□ -1.99
SDO1YLR022C YHC3P47040 408 aa2.64□□□□□ -1.99
SDO1YLR022C LIA1P47120 325 aaKnown RBP2.64□□□□□ -1.99
SDO1YLR022C TPC1P53257 314 aa2.64□□□□□ -1.99
SDO1YLR022C GPI1P53306 609 aa2.64□□□□□ -1.99
SDO1YLR022C SED1Q01589 338 aa2.64□□□□□ -1.99
SDO1YLR022C UTP6Q02354 440 aaKnown RBP2.64□□□□□ -1.99
SDO1YLR022C GIP3Q03016 1276 aa2.64□□□□□ -1.99
SDO1YLR022C RSN1Q03516 953 aa2.64□□□□□ -1.99
SDO1YLR022C GOT1Q03554 138 aa2.64□□□□□ -1.99
SDO1YLR022C IPK1Q06667 281 aa2.64□□□□□ -1.99
SDO1YLR022C APC2Q12440 853 aa2.64□□□□□ -1.99
SDO1YLR022C SCEIP03882 235 aa2.63□□□□□ -1.99
SDO1YLR022C YAK1P14680 807 aa2.63□□□□□ -1.99
SDO1YLR022C SAR1P20606 190 aaKnown RBP2.63□□□□□ -1.99
SDO1YLR022C MIG1P27705 504 aa2.63□□□□□ -1.99
SDO1YLR022C URA10P30402 227 aa2.63□□□□□ -1.99
SDO1YLR022C MNS1P32906 549 aa2.63□□□□□ -1.99
SDO1YLR022C VPS21P36017 210 aaKnown RBP2.63□□□□□ -1.99
SDO1YLR022C TCM62P38228 572 aaKnown RBP2.63□□□□□ -1.99
SDO1YLR022C MSG5P38590 489 aa2.63□□□□□ -1.99
SDO1YLR022C PEX18P38855 283 aa2.63□□□□□ -1.99
SDO1YLR022C PET100P38958 111 aa2.63□□□□□ -1.99
SDO1YLR022C END3P39013 349 aa2.63□□□□□ -1.99
SDO1YLR022C POP1P41812 875 aa2.63□□□□□ -1.99
SDO1YLR022C AGX1P43567 385 aa2.63□□□□□ -1.99
SDO1YLR022C LOC1P43586 204 aaPredicted RBP2.63□□□□□ -1.99
SDO1YLR022C AIM22P47051 409 aa2.63□□□□□ -1.99
SDO1YLR022C YJR011CP47086 261 aaPredicted RBP2.63□□□□□ -1.99
SDO1YLR022C YIP5P53108 310 aa2.63□□□□□ -1.99
SDO1YLR022C YGL114WP53134 725 aa2.63□□□□□ -1.99
SDO1YLR022C YPL039WQ03080 316 aa2.63□□□□□ -1.99
SDO1YLR022C NHP10Q03435 203 aa2.63□□□□□ -1.99
SDO1YLR022C ATC1Q04005 294 aa2.63□□□□□ -1.99
SDO1YLR022C ARR1Q06596 294 aa2.63□□□□□ -1.99
SDO1YLR022C FRE8Q12209 686 aa2.63□□□□□ -1.99
SDO1YLR022C RAX2Q12465 1220 aa2.63□□□□□ -1.99
SDO1YLR022C VPS63O13549 108 aa2.62□□□□□ -1.99
SDO1YLR022C YLR462WO13556 202 aa2.62□□□□□ -1.99
SDO1YLR022C IMA3P0CW40 589 aa2.62□□□□□ -1.99
SDO1YLR022C IMA4P0CW41 589 aa2.62□□□□□ -1.99
SDO1YLR022C ATP10P18496 279 aa2.62□□□□□ -1.99
SDO1YLR022C RPB4P20433 221 aaPredicted RBP2.62□□□□□ -1.99
SDO1YLR022C HMX1P32339 317 aa2.62□□□□□ -1.99
SDO1YLR022C CBF5P33322 483 aaKnown RBP RIP-Chip data2.62□□□□□ -1.99not detected
SDO1YLR022C SPT10P35208 640 aa2.62□□□□□ -1.99
SDO1YLR022C FIG1P38224 298 aa2.62□□□□□ -1.99
SDO1YLR022C ECM8P38246 354 aa2.62□□□□□ -1.99
SDO1YLR022C YHL049CP38722 271 aa2.62□□□□□ -1.99
SDO1YLR022C LIN1P38852 340 aaPredicted RBP2.62□□□□□ -1.99
SDO1YLR022C RCY1P39531 840 aa2.62□□□□□ -1.99
SDO1YLR022C TFG2P41896 400 aaPredicted RBP2.62□□□□□ -1.99
SDO1YLR022C YRB1P41920 201 aaKnown RBP2.62□□□□□ -1.99
SDO1YLR022C MPP6P53725 186 aaPredicted RBP2.62□□□□□ -1.99
SDO1YLR022C DSL1P53847 754 aa2.62□□□□□ -1.99
SDO1YLR022C OCA2P53949 197 aa2.62□□□□□ -1.99
SDO1YLR022C ABZ2Q03266 374 aa2.62□□□□□ -1.99
SDO1YLR022C HSP31Q04432 237 aa2.62□□□□□ -1.99
SDO1YLR022C ECM18Q04623 453 aa2.62□□□□□ -1.99
SDO1YLR022C IMA2Q08295 589 aa2.62□□□□□ -1.99
SDO1YLR022C ERV2Q12284 196 aa2.62□□□□□ -1.99
SDO1YLR022C YBL111CQ3E7Y5 667 aa2.62□□□□□ -1.99
SDO1YLR022C RHO1P06780 209 aaKnown RBP2.61□□□□□ -1.99
SDO1YLR022C CPR1P14832 162 aaKnown RBP2.61□□□□□ -1.99
SDO1YLR022C SPO12P17123 173 aa2.61□□□□□ -1.99
SDO1YLR022C UGA1P17649 471 aa2.61□□□□□ -1.99
SDO1YLR022C SAG1P20840 650 aa2.61□□□□□ -1.99
SDO1YLR022C PRP21P32524 280 aaPredicted RBP2.61□□□□□ -1.99
SDO1YLR022C YEL045CP32616 141 aa2.61□□□□□ -1.99
SDO1YLR022C PTM1P32857 523 aa2.61□□□□□ -1.99
SDO1YLR022C GCD10P41814 478 aa2.61□□□□□ -1.99
SDO1YLR022C YGR210CP42942 411 aa2.61□□□□□ -1.99
SDO1YLR022C ADO1P47143 340 aaKnown RBP2.61□□□□□ -1.99
SDO1YLR022C SIP18P50263 79 aa2.61□□□□□ -1.99
SDO1YLR022C VOA1P53262 265 aa2.61□□□□□ -1.99
SDO1YLR022C SHY1P53266 389 aa2.61□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms