RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C SYF2P53277 215 aaPredicted RBP1.6□□□□□ -2.15
CMS1YLR003C ERV25P54837 211 aaKnown RBP1.6□□□□□ -2.15
CMS1YLR003C SFH1Q06168 426 aa1.6□□□□□ -2.15
CMS1YLR003C CTR3Q06686 241 aa1.6□□□□□ -2.15
CMS1YLR003C CLP1Q08685 445 aaPredicted RBP1.6□□□□□ -2.15
CMS1YLR003C PRR2Q12310 699 aa1.6□□□□□ -2.15
CMS1YLR003C POF1P25576 258 aa1.59□□□□□ -2.15
CMS1YLR003C UTR5P32630 166 aa1.59□□□□□ -2.15
CMS1YLR003C HEK2P38199 381 aaKnown RBP RIP-Chip data1.59□□□□□ -2.15not detected
CMS1YLR003C TRM7P38238 310 aaKnown RBP1.59□□□□□ -2.15
CMS1YLR003C RRF1P38771 230 aa1.59□□□□□ -2.15
CMS1YLR003C YER084WP40057 128 aa1.59□□□□□ -2.15
CMS1YLR003C TIM21P53220 239 aa1.59□□□□□ -2.15
CMS1YLR003C FMP41P53889 259 aaKnown RBP1.59□□□□□ -2.15
CMS1YLR003C VBA1Q04301 562 aa1.59□□□□□ -2.15
CMS1YLR003C CDD1Q06549 142 aa1.59□□□□□ -2.15
CMS1YLR003C FEX1Q08913 375 aa1.59□□□□□ -2.15
CMS1YLR003C FEX2Q08991 375 aa1.59□□□□□ -2.15
CMS1YLR003C TIM22Q12328 207 aa1.59□□□□□ -2.15
CMS1YLR003C SSA3P09435 649 aaKnown RBP1.58□□□□□ -2.16
CMS1YLR003C MET16P18408 261 aaPredicted RBP1.58□□□□□ -2.16
CMS1YLR003C SDH4P37298 181 aa1.58□□□□□ -2.16
CMS1YLR003C ARN2P38724 620 aa1.58□□□□□ -2.16
CMS1YLR003C FMP33P46998 180 aa1.58□□□□□ -2.16
CMS1YLR003C TAD2P47058 250 aa1.58□□□□□ -2.16
CMS1YLR003C YPL039WQ03080 316 aa1.58□□□□□ -2.16
CMS1YLR003C YMR166CQ03829 368 aa1.58□□□□□ -2.16
CMS1YLR003C TVP15Q03860 143 aa1.58□□□□□ -2.16
CMS1YLR003C PEX10Q05568 337 aa1.58□□□□□ -2.16
CMS1YLR003C SEC10Q06245 871 aa1.58□□□□□ -2.16
CMS1YLR003C ATG5Q12380 294 aa1.58□□□□□ -2.16
CMS1YLR003C YAL064W-BO13512 126 aa1.57□□□□□ -2.16
CMS1YLR003C RRT12P25381 491 aa1.57□□□□□ -2.16
CMS1YLR003C PEX3P28795 441 aa1.57□□□□□ -2.16
CMS1YLR003C CAB3P36076 571 aa1.57□□□□□ -2.16
CMS1YLR003C SPL2P38839 148 aa1.57□□□□□ -2.16
CMS1YLR003C RTT105P40063 208 aa1.57□□□□□ -2.16
CMS1YLR003C COA1P40452 197 aa1.57□□□□□ -2.16
CMS1YLR003C IBA57P47158 497 aa1.57□□□□□ -2.16
CMS1YLR003C GPI8P49018 411 aa1.57□□□□□ -2.16
CMS1YLR003C NIF3P53081 288 aa1.57□□□□□ -2.16
CMS1YLR003C SSU72P53538 206 aaPredicted RBP1.57□□□□□ -2.16
CMS1YLR003C MPP6P53725 186 aaPredicted RBP1.57□□□□□ -2.16
CMS1YLR003C YOS9Q99220 542 aa1.57□□□□□ -2.16
CMS1YLR003C STH1P32597 1359 aa1.57□□□□□ -2.16
CMS1YLR003C MRP1P10662 321 aaKnown RBP1.56□□□□□ -2.16
CMS1YLR003C HSM3P38348 480 aa1.56□□□□□ -2.16
CMS1YLR003C MED6P38782 295 aa1.56□□□□□ -2.16
CMS1YLR003C SHC1P39000 512 aa1.56□□□□□ -2.16
CMS1YLR003C RCY1P39531 840 aa1.56□□□□□ -2.16
CMS1YLR003C SER33P40510 469 aa1.56□□□□□ -2.16
CMS1YLR003C PIR5P46999 287 aa1.56□□□□□ -2.16
CMS1YLR003C YJL118WP47022 219 aa1.56□□□□□ -2.16
CMS1YLR003C YNL095CP53932 642 aa1.56□□□□□ -2.16
CMS1YLR003C OST6Q03723 332 aa1.56□□□□□ -2.16
CMS1YLR003C GMC2Q06201 188 aa1.56□□□□□ -2.16
CMS1YLR003C ARV1Q06541 321 aa1.56□□□□□ -2.16
CMS1YLR003C RDS3Q06835 107 aaPredicted RBP1.56□□□□□ -2.16
CMS1YLR003C ISD11Q6Q560 94 aa1.56□□□□□ -2.16
CMS1YLR003C TDH2P00358 332 aaKnown RBP1.55□□□□□ -2.16
CMS1YLR003C HIS1P00498 297 aaKnown RBP1.55□□□□□ -2.16
CMS1YLR003C RPL24AP04449 155 aaKnown RBP1.55□□□□□ -2.16
CMS1YLR003C RSA4P25382 515 aaKnown RBP1.55□□□□□ -2.16
CMS1YLR003C BMH1P29311 267 aaKnown RBP1.55□□□□□ -2.16
CMS1YLR003C RIB7P33312 244 aa1.55□□□□□ -2.16
CMS1YLR003C COY1P34237 679 aa1.55□□□□□ -2.16
CMS1YLR003C SUR2P38992 349 aa1.55□□□□□ -2.16
CMS1YLR003C NPT1P39683 429 aaKnown RBP1.55□□□□□ -2.16
CMS1YLR003C DSK2P48510 373 aa1.55□□□□□ -2.16
CMS1YLR003C LSB1P53281 241 aa1.55□□□□□ -2.16
CMS1YLR003C RGM1Q00453 211 aa1.55□□□□□ -2.16
CMS1YLR003C CDC14Q00684 551 aa1.55□□□□□ -2.16
CMS1YLR003C TRM44Q02648 567 aaKnown RBP1.55□□□□□ -2.16
CMS1YLR003C SLD7Q08457 257 aa1.55□□□□□ -2.16
CMS1YLR003C HIS3P06633 220 aa1.54□□□□□ -2.16
CMS1YLR003C RAD10P06838 210 aa1.54□□□□□ -2.16
CMS1YLR003C RPL4AP10664 362 aaKnown RBP1.54□□□□□ -2.16
CMS1YLR003C OM45P16547 393 aa1.54□□□□□ -2.16
CMS1YLR003C CSG2P35206 410 aa1.54□□□□□ -2.16
CMS1YLR003C EBP2P36049 427 aaKnown RBP1.54□□□□□ -2.16
CMS1YLR003C HMT1P38074 348 aa1.54□□□□□ -2.16
CMS1YLR003C MAL32P38158 584 aa1.54□□□□□ -2.16
CMS1YLR003C SCC4P40090 624 aa1.54□□□□□ -2.16
CMS1YLR003C MEP1P40260 492 aa1.54□□□□□ -2.16
CMS1YLR003C YJR012CP47087 207 aa1.54□□□□□ -2.16
CMS1YLR003C RPL4BP49626 362 aaKnown RBP1.54□□□□□ -2.16
CMS1YLR003C NBP1P52919 319 aaPredicted RBP1.54□□□□□ -2.16
CMS1YLR003C SLX9P53251 210 aaPredicted RBP1.54□□□□□ -2.16
CMS1YLR003C MAL12P53341 584 aa1.54□□□□□ -2.16
CMS1YLR003C SDC1Q03323 175 aa1.54□□□□□ -2.16
CMS1YLR003C COX20Q04935 205 aa1.54□□□□□ -2.16
CMS1YLR003C PST1Q12355 444 aa1.54□□□□□ -2.16
CMS1YLR003C YPL119C-AQ3E751 87 aa1.54□□□□□ -2.16
CMS1YLR003C AI5_BETAQ9ZZX0 354 aa1.54□□□□□ -2.16
CMS1YLR003C FKS1P38631 1876 aaKnown RBP1.54□□□□□ -2.16
CMS1YLR003C RPP0P05317 312 aaKnown RBP1.53□□□□□ -2.16
CMS1YLR003C ZWF1P11412 505 aaKnown RBP1.53□□□□□ -2.16
CMS1YLR003C SFC1P33303 322 aa1.53□□□□□ -2.16
CMS1YLR003C YHI9P38765 294 aa1.53□□□□□ -2.16
CMS1YLR003C YDR209CQ03480 137 aa1.53□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 128.5 ms