RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C YOR114WQ12219 294 aa1.16□□□□□ -2.22
RPL40BYKR094C TRM10Q12400 293 aa1.16□□□□□ -2.22
RPL40BYKR094C YAL067W-AQ8TGK6 75 aa1.16□□□□□ -2.22
RPL40BYKR094C YOS9Q99220 542 aa1.16□□□□□ -2.22
RPL40BYKR094C STH1P32597 1359 aa1.16□□□□□ -2.22
RPL40BYKR094C CFT1Q06632 1357 aaKnown RBP1.16□□□□□ -2.22
RPL40BYKR094C BEM2P39960 2167 aaKnown RBP1.15□□□□□ -2.22
RPL40BYKR094C YAL064W-BO13512 126 aa1.15□□□□□ -2.23
RPL40BYKR094C RPS3P05750 240 aaKnown RBP1.15□□□□□ -2.23
RPL40BYKR094C OSM1P21375 501 aaKnown RBP1.15□□□□□ -2.23
RPL40BYKR094C RNA15P25299 296 aaPredicted RBP1.15□□□□□ -2.23
RPL40BYKR094C BMH2P34730 273 aaKnown RBP1.15□□□□□ -2.23
RPL40BYKR094C GPX1P36014 167 aa1.15□□□□□ -2.23
RPL40BYKR094C FRM2P37261 193 aa1.15□□□□□ -2.23
RPL40BYKR094C PRS4P38063 326 aaPredicted RBP1.15□□□□□ -2.23
RPL40BYKR094C FZO1P38297 855 aa1.15□□□□□ -2.23
RPL40BYKR094C PRS2P38620 318 aaKnown RBP1.15□□□□□ -2.23
RPL40BYKR094C VAB2P40003 282 aa1.15□□□□□ -2.23
RPL40BYKR094C UFE1P41834 346 aa1.15□□□□□ -2.23
RPL40BYKR094C YAR1P46683 200 aa1.15□□□□□ -2.23
RPL40BYKR094C RPE1P46969 238 aa1.15□□□□□ -2.23
RPL40BYKR094C TPN1P53099 579 aa1.15□□□□□ -2.23
RPL40BYKR094C LIF1P53150 421 aa1.15□□□□□ -2.23
RPL40BYKR094C SLX9P53251 210 aaPredicted RBP1.15□□□□□ -2.23
RPL40BYKR094C RSM27P53305 110 aa1.15□□□□□ -2.23
RPL40BYKR094C YNL040WP53960 456 aaPredicted RBP1.15□□□□□ -2.23
RPL40BYKR094C ASI3P53983 676 aa1.15□□□□□ -2.23
RPL40BYKR094C YPL113CQ02961 396 aa1.15□□□□□ -2.23
RPL40BYKR094C SRL4Q03085 281 aa1.15□□□□□ -2.23
RPL40BYKR094C EBS1Q03466 884 aaKnown RBP1.15□□□□□ -2.23
RPL40BYKR094C RNH1Q04740 348 aa1.15□□□□□ -2.23
RPL40BYKR094C NNT1Q05874 261 aa1.15□□□□□ -2.23
RPL40BYKR094C BOP2Q06150 570 aa1.15□□□□□ -2.23
RPL40BYKR094C SDO1Q07953 250 aaKnown RBP1.15□□□□□ -2.23
RPL40BYKR094C RRS1Q08746 203 aaKnown RBP1.15□□□□□ -2.23
RPL40BYKR094C YOR029WQ12243 111 aa1.15□□□□□ -2.23
RPL40BYKR094C SME1Q12330 94 aaPredicted RBP1.15□□□□□ -2.23
RPL40BYKR094C SNU23Q12368 194 aaPredicted RBP1.15□□□□□ -2.23
RPL40BYKR094C YPL119C-AQ3E751 87 aa1.15□□□□□ -2.23
RPL40BYKR094C AUS1Q08409 1394 aa1.15□□□□□ -2.23
RPL40BYKR094C NUP157P40064 1391 aaKnown RBP1.14□□□□□ -2.23
RPL40BYKR094C YEL009C-AA0A023PZF2 135 aa1.14□□□□□ -2.23
RPL40BYKR094C PET494P07390 489 aaPredicted RBP1.14□□□□□ -2.23
RPL40BYKR094C RPL4AP10664 362 aaKnown RBP1.14□□□□□ -2.23
RPL40BYKR094C CPT1P17898 393 aa1.14□□□□□ -2.23
RPL40BYKR094C PPA2P28239 310 aa1.14□□□□□ -2.23
RPL40BYKR094C VPH2P32341 215 aa1.14□□□□□ -2.23
RPL40BYKR094C ARO4P32449 370 aaKnown RBP1.14□□□□□ -2.23
RPL40BYKR094C RPT5P33297 434 aaKnown RBP1.14□□□□□ -2.23
RPL40BYKR094C SGE1P33335 543 aa1.14□□□□□ -2.23
RPL40BYKR094C DBP7P36120 742 aaKnown RBP1.14□□□□□ -2.23
RPL40BYKR094C HEK2P38199 381 aaKnown RBP RIP-Chip data1.14□□□□□ -2.23not detected
RPL40BYKR094C POP8P38208 133 aa1.14□□□□□ -2.23
RPL40BYKR094C YBR062CP38239 180 aa1.14□□□□□ -2.23
RPL40BYKR094C YGP1P38616 354 aaKnown RBP1.14□□□□□ -2.23
RPL40BYKR094C YHI9P38765 294 aa1.14□□□□□ -2.23
RPL40BYKR094C NPT1P39683 429 aaKnown RBP1.14□□□□□ -2.23
RPL40BYKR094C BDH1P39714 382 aa1.14□□□□□ -2.23
RPL40BYKR094C THO1P40040 218 aaKnown RBP1.14□□□□□ -2.23
RPL40BYKR094C YER085CP40058 173 aa1.14□□□□□ -2.23
RPL40BYKR094C AVT6P40074 448 aa1.14□□□□□ -2.23
RPL40BYKR094C AVT7P40501 490 aa1.14□□□□□ -2.23
RPL40BYKR094C IBA57P47158 497 aa1.14□□□□□ -2.23
RPL40BYKR094C RPL4BP49626 362 aaKnown RBP1.14□□□□□ -2.23
RPL40BYKR094C USE1P53146 245 aa1.14□□□□□ -2.23
RPL40BYKR094C CGR1P53188 120 aa1.14□□□□□ -2.23
RPL40BYKR094C MAL13P53338 473 aa1.14□□□□□ -2.23
RPL40BYKR094C MNT4P53745 580 aa1.14□□□□□ -2.23
RPL40BYKR094C SWT21P53873 357 aaPredicted RBP1.14□□□□□ -2.23
RPL40BYKR094C YNL095CP53932 642 aa1.14□□□□□ -2.23
RPL40BYKR094C RHO3Q00245 231 aaKnown RBP1.14□□□□□ -2.23
RPL40BYKR094C KRE28Q04431 385 aa1.14□□□□□ -2.23
RPL40BYKR094C ATG17Q06410 417 aa1.14□□□□□ -2.23
RPL40BYKR094C SLD7Q08457 257 aa1.14□□□□□ -2.23
RPL40BYKR094C YDL211CQ12121 372 aa1.14□□□□□ -2.23
RPL40BYKR094C MSH5Q12175 901 aa1.14□□□□□ -2.23
RPL40BYKR094C YDR018CQ12185 396 aa1.14□□□□□ -2.23
RPL40BYKR094C DFM1Q12743 341 aaKnown RBP1.14□□□□□ -2.23
RPL40BYKR094C POX1P13711 748 aa1.13□□□□□ -2.23
RPL40BYKR094C FUS3P16892 353 aaKnown RBP1.13□□□□□ -2.23
RPL40BYKR094C PHO80P20052 293 aa1.13□□□□□ -2.23
RPL40BYKR094C MRPL25P23369 157 aa1.13□□□□□ -2.23
RPL40BYKR094C RPL24BP24000 155 aaKnown RBP1.13□□□□□ -2.23
RPL40BYKR094C QRI5P32344 111 aa1.13□□□□□ -2.23
RPL40BYKR094C ERG2P32352 222 aa1.13□□□□□ -2.23
RPL40BYKR094C MRPL39P36533 70 aa1.13□□□□□ -2.23
RPL40BYKR094C LDB7P38210 180 aa1.13□□□□□ -2.23
RPL40BYKR094C MBA1P38300 278 aa1.13□□□□□ -2.23
RPL40BYKR094C MED8P38304 223 aa1.13□□□□□ -2.23
RPL40BYKR094C ATG12P38316 186 aa1.13□□□□□ -2.23
RPL40BYKR094C SSH1P38353 490 aaKnown RBP1.13□□□□□ -2.23
RPL40BYKR094C CUE1P38428 203 aa1.13□□□□□ -2.23
RPL40BYKR094C BFR1P38934 470 aaKnown RBP RIP-Chip data1.13□□□□□ -2.23not detected
RPL40BYKR094C RTR1P40084 226 aaPredicted RBP1.13□□□□□ -2.23
RPL40BYKR094C COX15P40086 486 aa1.13□□□□□ -2.23
RPL40BYKR094C RRG9P40156 214 aa1.13□□□□□ -2.23
RPL40BYKR094C GCN20P43535 752 aaKnown RBP1.13□□□□□ -2.23
RPL40BYKR094C NBP1P52919 319 aaPredicted RBP1.13□□□□□ -2.23
RPL40BYKR094C TIM11P81449 96 aaPredicted RBP1.13□□□□□ -2.23
RPL40BYKR094C MYO5Q04439 1219 aaKnown RBP1.13□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 36.3 ms