RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeastyeast

Gene SHB17, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHB17YKR043C SKO1Q02100 647 aa8.83□□□□□ -1
SHB17YKR043C DIG2Q03373 323 aaKnown RBP8.83□□□□□ -1
SHB17YKR043C RSM28Q03430 361 aa8.83□□□□□ -1
SHB17YKR043C YDR391CQ04170 232 aa8.83□□□□□ -1
SHB17YKR043C YBL029C-AQ3E756 94 aa8.83□□□□□ -1
SHB17YKR043C DSF1P0CX08 502 aa8.82□□□□□ -1
SHB17YKR043C YNR073CP0CX09 502 aa8.82□□□□□ -1
SHB17YKR043C CLB2P24869 491 aa8.82□□□□□ -1
SHB17YKR043C MTC2P34246 357 aa8.82□□□□□ -1
SHB17YKR043C CLG1P35190 452 aa8.82□□□□□ -1
SHB17YKR043C TAT1P38085 619 aa8.82□□□□□ -1
SHB17YKR043C PUG1P40100 303 aa8.82□□□□□ -1
SHB17YKR043C AAD14P42884 376 aa8.82□□□□□ -1
SHB17YKR043C PMT6P42934 759 aa8.82□□□□□ -1
SHB17YKR043C PAU12P53343 120 aa8.82□□□□□ -1
SHB17YKR043C CRZ1P53968 678 aa8.82□□□□□ -1
SHB17YKR043C RSM23Q01163 450 aa8.82□□□□□ -1
SHB17YKR043C RRP15Q06511 250 aaPredicted RBP8.82□□□□□ -1
SHB17YKR043C PML1Q07930 204 aaPredicted RBP8.82□□□□□ -1
SHB17YKR043C NOP56Q12460 504 aaKnown RBP RIP-Chip data8.82□□□□□ -1not detected
SHB17YKR043C FRE6Q12473 712 aa8.82□□□□□ -1
SHB17YKR043C MES1P00958 751 aaKnown RBP8.81□□□□□ -1
SHB17YKR043C DPB2P24482 689 aaPredicted RBP8.81□□□□□ -1
SHB17YKR043C VMA6P32366 345 aaKnown RBP8.81□□□□□ -1
SHB17YKR043C NPL6P32832 435 aa8.81□□□□□ -1
SHB17YKR043C SEC66P33754 206 aa8.81□□□□□ -1
SHB17YKR043C MIA40P36046 403 aa8.81□□□□□ -1
SHB17YKR043C YPL077CQ02831 240 aa8.81□□□□□ -1
SHB17YKR043C YDR179W-AQ03983 463 aa8.81□□□□□ -1
SHB17YKR043C NEJ1Q06148 342 aa8.81□□□□□ -1
SHB17YKR043C RBD2Q12270 262 aa8.81□□□□□ -1
SHB17YKR043C DAL80P26343 269 aa8.8□□□□□ -1
SHB17YKR043C GLC7P32598 312 aaKnown RBP8.8□□□□□ -1
SHB17YKR043C SPC29P33419 253 aa8.8□□□□□ -1
SHB17YKR043C ANR2P36090 516 aaPredicted RBP8.8□□□□□ -1
SHB17YKR043C FRM2P37261 193 aa8.8□□□□□ -1
SHB17YKR043C PEX32P38292 413 aa8.8□□□□□ -1
SHB17YKR043C NVJ1P38881 321 aa8.8□□□□□ -1
SHB17YKR043C CTK2P46962 323 aa8.8□□□□□ -1
SHB17YKR043C INN1P53901 409 aa8.8□□□□□ -1
SHB17YKR043C LAP3Q01532 483 aaKnown RBP RIP-Chip data8.8□□□□□ -1not detected
SHB17YKR043C SED1Q01589 338 aa8.8□□□□□ -1
SHB17YKR043C GAL83Q04739 417 aa8.8□□□□□ -1
SHB17YKR043C YMR252CQ04814 134 aa8.8□□□□□ -1
SHB17YKR043C MRX10Q05648 414 aa8.8□□□□□ -1
SHB17YKR043C YTH1Q06102 208 aaPredicted RBP8.8□□□□□ -1
SHB17YKR043C GAT3Q07928 141 aa8.8□□□□□ -1
SHB17YKR043C TMC1Q08422 150 aaPredicted RBP8.8□□□□□ -1
SHB17YKR043C WSC3Q12215 556 aa8.8□□□□□ -1
SHB17YKR043C SOD2P00447 233 aa8.79□□□□□ -1
SHB17YKR043C NAM2P11325 894 aa8.79□□□□□ -1
SHB17YKR043C FUN26P31381 517 aa8.79□□□□□ -1
SHB17YKR043C VPS17P32913 551 aa8.79□□□□□ -1
SHB17YKR043C YKL107WP34251 309 aa8.79□□□□□ -1
SHB17YKR043C FLX1P40464 311 aa8.79□□□□□ -1
SHB17YKR043C YIL029CP40538 142 aa8.79□□□□□ -1
SHB17YKR043C PAM16P42949 149 aa8.79□□□□□ -1
SHB17YKR043C DMA2P53924 522 aa8.79□□□□□ -1
SHB17YKR043C SRL4Q03085 281 aa8.79□□□□□ -1
SHB17YKR043C MAK3Q03503 176 aa8.79□□□□□ -1
SHB17YKR043C YDR514CQ04408 483 aa8.79□□□□□ -1
SHB17YKR043C HLR1Q04429 423 aa8.79□□□□□ -1
SHB17YKR043C YOR238WQ08634 303 aa8.79□□□□□ -1
SHB17YKR043C TY1A-NL1Q12391 440 aaKnown RBP8.79□□□□□ -1
SHB17YKR043C YPR1Q12458 312 aa8.79□□□□□ -1
SHB17YKR043C Q0297Q9ZZV8 51 aa8.79□□□□□ -1
SHB17YKR043C RPS23AP0CX29 145 aaKnown RBP8.78□□□□□ -1
SHB17YKR043C RPS23BP0CX30 145 aa8.78□□□□□ -1
SHB17YKR043C MRT4P33201 236 aaKnown RBP8.78□□□□□ -1
SHB17YKR043C PAU24P38155 120 aa8.78□□□□□ -1
SHB17YKR043C ECM14P38836 430 aa8.78□□□□□ -1
SHB17YKR043C ATF1P40353 525 aa8.78□□□□□ -1
SHB17YKR043C SLS1P42900 643 aa8.78□□□□□ -1
SHB17YKR043C YMR279CQ03263 540 aa8.78□□□□□ -1
SHB17YKR043C TSR2Q06672 205 aaKnown RBP8.78□□□□□ -1
SHB17YKR043C RRS1Q08746 203 aaKnown RBP8.78□□□□□ -1
SHB17YKR043C SRL2Q12020 392 aa8.78□□□□□ -1
SHB17YKR043C TDH3P00359 332 aaKnown RBP RIP-Chip data8.77□□□□□ -1.01not detected
SHB17YKR043C COX9P07255 59 aa8.77□□□□□ -1.01
SHB17YKR043C MET3P08536 511 aa8.77□□□□□ -1.01
SHB17YKR043C MRP1P10662 321 aaKnown RBP8.77□□□□□ -1.01
SHB17YKR043C PRE7P23724 241 aaKnown RBP8.77□□□□□ -1.01
SHB17YKR043C GDS1P41913 522 aa8.77□□□□□ -1.01
SHB17YKR043C YJL016WP47072 561 aa8.77□□□□□ -1.01
SHB17YKR043C EFM3P47163 339 aa8.77□□□□□ -1.01
SHB17YKR043C AAH1P53909 347 aa8.77□□□□□ -1.01
SHB17YKR043C YLR152CP54072 576 aa8.77□□□□□ -1.01
SHB17YKR043C HHT1P61830 136 aa8.77□□□□□ -1.01
SHB17YKR043C YKR005CQ02203 525 aa8.77□□□□□ -1.01
SHB17YKR043C ORM2Q06144 216 aa8.77□□□□□ -1.01
SHB17YKR043C LUC7Q07508 261 aaPredicted RBP8.77□□□□□ -1.01
SHB17YKR043C ISA2Q12425 185 aa8.77□□□□□ -1.01
SHB17YKR043C NAB2P32505 525 aaKnown RBP RIP-Chip data8.76□□□□□ -1.01not detected
SHB17YKR043C UTP11P34247 250 aaPredicted RBP8.76□□□□□ -1.01
SHB17YKR043C RSM22P36056 628 aa8.76□□□□□ -1.01
SHB17YKR043C SDS24P38314 527 aa8.76□□□□□ -1.01
SHB17YKR043C IES5P40060 125 aa8.76□□□□□ -1.01
SHB17YKR043C OST1P41543 476 aaKnown RBP8.76□□□□□ -1.01
SHB17YKR043C LYS20P48570 428 aaKnown RBP8.76□□□□□ -1.01
SHB17YKR043C RBL2P48606 106 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 58 ms