RNA–Protein interactions for RNA: YJL189W

RPL39, Transcript of Ribosomal 60S subunit protein L39, yeastyeast

Gene RPL39, Length 156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL39YJL189W SPT8P38915 602 aa0.07□□□□□ -2.4
RPL39YJL189W SAS5Q99314 248 aa0.07□□□□□ -2.4
RPL39YJL189W PPH21P23594 369 aa0.06□□□□□ -2.4
RPL39YJL189W BMT5P40493 336 aa0.06□□□□□ -2.4
RPL39YJL189W INA22P40576 216 aa0.06□□□□□ -2.4
RPL39YJL189W KEL2P50090 882 aa0.06□□□□□ -2.4
RPL39YJL189W RPL37BP51402 88 aaKnown RBP0.06□□□□□ -2.4
RPL39YJL189W NIF3P53081 288 aa0.06□□□□□ -2.4
RPL39YJL189W DAD3P69850 94 aa0.06□□□□□ -2.4
RPL39YJL189W YML018CQ03730 393 aa0.06□□□□□ -2.4
RPL39YJL189W YMR111CQ04461 462 aaPredicted RBP0.06□□□□□ -2.4
RPL39YJL189W LOA1Q06508 300 aa0.06□□□□□ -2.4
RPL39YJL189W SAM4Q08985 325 aaKnown RBP0.06□□□□□ -2.4
RPL39YJL189W YPR064WQ12492 139 aa0.06□□□□□ -2.4
RPL39YJL189W FBA1P14540 359 aaKnown RBP0.05□□□□□ -2.4
RPL39YJL189W RPS0AP32905 252 aaKnown RBP0.05□□□□□ -2.4
RPL39YJL189W CAJ1P39101 391 aa0.05□□□□□ -2.4
RPL39YJL189W YHB1P39676 399 aaKnown RBP0.05□□□□□ -2.4
RPL39YJL189W PRM10P42946 383 aa0.05□□□□□ -2.4
RPL39YJL189W CUE3P53137 624 aaKnown RBP0.05□□□□□ -2.4
RPL39YJL189W RRP42Q12277 265 aaPredicted RBP0.05□□□□□ -2.4
RPL39YJL189W HMT1P38074 348 aa0.04□□□□□ -2.4
RPL39YJL189W CYT2Q00873 224 aa0.04□□□□□ -2.4
RPL39YJL189W DBP9Q06218 594 aaKnown RBP0.04□□□□□ -2.4
RPL39YJL189W IZH4Q99393 312 aa0.04□□□□□ -2.4
RPL39YJL189W COS2P0CX12 379 aa0.03□□□□□ -2.4
RPL39YJL189W COS3P0CX13 379 aa0.03□□□□□ -2.4
RPL39YJL189W VMA2P16140 517 aaKnown RBP0.03□□□□□ -2.4
RPL39YJL189W RNP1P32385 249 aa0.03□□□□□ -2.4
RPL39YJL189W SPT4P32914 102 aaPredicted RBP0.03□□□□□ -2.4
RPL39YJL189W YJL028WP47062 111 aa0.03□□□□□ -2.4
RPL39YJL189W EOS1P53938 366 aa0.03□□□□□ -2.4
RPL39YJL189W RSM10Q03201 203 aa0.03□□□□□ -2.4
RPL39YJL189W CTR3Q06686 241 aa0.03□□□□□ -2.4
RPL39YJL189W PML1Q07930 204 aaPredicted RBP0.03□□□□□ -2.4
RPL39YJL189W SKS1Q12505 502 aa0.03□□□□□ -2.4
RPL39YJL189W NBL1Q3E7Y6 73 aa0.03□□□□□ -2.4
RPL39YJL189W DSF1P0CX08 502 aa0.02□□□□□ -2.41
RPL39YJL189W YNR073CP0CX09 502 aa0.02□□□□□ -2.41
RPL39YJL189W MDH2P22133 377 aa0.02□□□□□ -2.41
RPL39YJL189W PEX4P29340 183 aa0.02□□□□□ -2.41
RPL39YJL189W MAL32P38158 584 aa0.02□□□□□ -2.41
RPL39YJL189W HUA1P40325 198 aa0.02□□□□□ -2.41
RPL39YJL189W SMD3P43321 101 aaKnown RBP0.02□□□□□ -2.41
RPL39YJL189W MAL12P53341 584 aa0.02□□□□□ -2.41
RPL39YJL189W PRM15Q03262 622 aa0.02□□□□□ -2.41
RPL39YJL189W MRPS8Q03799 155 aa0.02□□□□□ -2.41
RPL39YJL189W APC9Q12107 265 aa0.02□□□□□ -2.41
RPL39YJL189W SMT3Q12306 101 aaKnown RBP0.02□□□□□ -2.41
RPL39YJL189W YPR1Q12458 312 aa0.02□□□□□ -2.41
RPL39YJL189W YMR316C-AI2HB70 103 aa0.01□□□□□ -2.41
RPL39YJL189W PET494P07390 489 aaPredicted RBP0.01□□□□□ -2.41
RPL39YJL189W YHR032W-AP0C5N6 59 aa0.01□□□□□ -2.41
RPL39YJL189W TAL1P15019 335 aaKnown RBP0.01□□□□□ -2.41
RPL39YJL189W SUA5P32579 426 aa0.01□□□□□ -2.41
RPL39YJL189W RXT2P38255 430 aa0.01□□□□□ -2.41
RPL39YJL189W FET3P38993 636 aa0.01□□□□□ -2.41
RPL39YJL189W VTC1P40046 129 aaRIP-Chip data0.01□□□□□ -2.41not detected
RPL39YJL189W YMR209CQ03648 457 aa0.01□□□□□ -2.41
RPL39YJL189W PST1Q12355 444 aa0.01□□□□□ -2.41
RPL39YJL189W RNR2P09938 399 aaKnown RBP0□□□□□ -2.41
RPL39YJL189W CCA1P21269 546 aa0□□□□□ -2.41
RPL39YJL189W LAS1P36146 502 aaPredicted RBP0□□□□□ -2.41
RPL39YJL189W YHR022CP38763 256 aa0□□□□□ -2.41
RPL39YJL189W YHI9P38765 294 aa0□□□□□ -2.41
RPL39YJL189W LIN1P38852 340 aaPredicted RBP0□□□□□ -2.41
RPL39YJL189W VPS60Q03390 229 aa0□□□□□ -2.41
RPL39YJL189W EMI1Q04406 187 aa0□□□□□ -2.41
RPL39YJL189W BOP2Q06150 570 aa0□□□□□ -2.41
RPL39YJL189W YLR162WQ06235 118 aa0□□□□□ -2.41
RPL39YJL189W ATO3Q12359 275 aa0□□□□□ -2.41
RPL39YJL189W CYR1P08678 2026 aaKnown RBP-0.01□□□□□ -2.41
RPL39YJL189W RPS3P05750 240 aaKnown RBP-0.01□□□□□ -2.41
RPL39YJL189W GAL3P13045 520 aa-0.01□□□□□ -2.41
RPL39YJL189W TEM1P38987 245 aa-0.01□□□□□ -2.41
RPL39YJL189W SHC1P39000 512 aa-0.01□□□□□ -2.41
RPL39YJL189W JEM1P40358 645 aa-0.01□□□□□ -2.41
RPL39YJL189W SDC1Q03323 175 aa-0.01□□□□□ -2.41
RPL39YJL189W SWI3P32591 825 aa-0.02□□□□□ -2.41
RPL39YJL189W DRE2P36152 348 aa-0.02□□□□□ -2.41
RPL39YJL189W PHO88P38264 188 aaPredicted RBP-0.02□□□□□ -2.41
RPL39YJL189W AGX1P43567 385 aa-0.02□□□□□ -2.41
RPL39YJL189W RAD3P06839 778 aa-0.03□□□□□ -2.41
RPL39YJL189W DDI2P0CH63 225 aa-0.03□□□□□ -2.41
RPL39YJL189W DDI3P0CH64 225 aa-0.03□□□□□ -2.41
RPL39YJL189W POT1P27796 417 aaKnown RBP RIP-Chip data-0.03□□□□□ -2.41not detected
RPL39YJL189W CAM1P29547 415 aaKnown RBP-0.03□□□□□ -2.41
RPL39YJL189W YKL063CP35725 167 aa-0.03□□□□□ -2.41
RPL39YJL189W SWD2P36104 329 aaPredicted RBP-0.03□□□□□ -2.41
RPL39YJL189W RPC37P36121 282 aa-0.03□□□□□ -2.41
RPL39YJL189W TCD1P38756 429 aa-0.03□□□□□ -2.41
RPL39YJL189W TAF9Q05027 157 aa-0.03□□□□□ -2.41
RPL39YJL189W NFI1Q12216 726 aa-0.03□□□□□ -2.41
RPL39YJL189W PAA1Q12447 191 aaKnown RBP-0.03□□□□□ -2.41
RPL39YJL189W FLO9P39712 1322 aa-0.04□□□□□ -2.42
RPL39YJL189W VAR1P02381 398 aa-0.04□□□□□ -2.42
RPL39YJL189W UPS2P35200 230 aa-0.04□□□□□ -2.42
RPL39YJL189W SIF2P38262 535 aa-0.04□□□□□ -2.42
RPL39YJL189W AVT2P39981 480 aa-0.04□□□□□ -2.42
RPL39YJL189W OST2P46964 130 aa-0.04□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 73 ms