RNA–Protein interactions for RNA: YHR105W

YPT35, Transcript of Endosomal protein of unknown function, yeast

Gene YPT35, Length 645 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT35	YHR105W	NAG1	Q8TGN9	163 aa		3.14	□□□□□ -1.91
YPT35	YHR105W	FKS1	P38631	1876 aa	Known RBP	3.13	□□□□□ -1.91
YPT35	YHR105W	SNF4	P12904	322 aa		3.13	□□□□□ -1.91
YPT35	YHR105W	NMT1	P14743	455 aa		3.13	□□□□□ -1.91
YPT35	YHR105W	CBS2	P14905	389 aa		3.13	□□□□□ -1.91
YPT35	YHR105W	MIR1	P23641	311 aa	Known RBP	3.13	□□□□□ -1.91
YPT35	YHR105W	HSP30	P25619	332 aa		3.13	□□□□□ -1.91
YPT35	YHR105W	ATP7	P30902	174 aa		3.13	□□□□□ -1.91
YPT35	YHR105W	ACB1	P31787	87 aa		3.13	□□□□□ -1.91
YPT35	YHR105W	VMA6	P32366	345 aa	Known RBP	3.13	□□□□□ -1.91
YPT35	YHR105W	MRPL37	P36532	105 aa		3.13	□□□□□ -1.91
YPT35	YHR105W	SEO1	P39709	593 aa		3.13	□□□□□ -1.91
YPT35	YHR105W	AST2	P39945	430 aa	Known RBP	3.13	□□□□□ -1.91
YPT35	YHR105W	YER186C	P40101	306 aa		3.13	□□□□□ -1.91
YPT35	YHR105W	HAM1	P47119	197 aa	Known RBP	3.13	□□□□□ -1.91
YPT35	YHR105W	NOP19	P53317	196 aa	Predicted RBP	3.13	□□□□□ -1.91
YPT35	YHR105W	SED5	Q01590	340 aa		3.13	□□□□□ -1.91
YPT35	YHR105W	IRC4	Q03036	179 aa		3.13	□□□□□ -1.91
YPT35	YHR105W	DML1	Q03652	475 aa		3.13	□□□□□ -1.91
YPT35	YHR105W	YDR222W	Q04925	415 aa		3.13	□□□□□ -1.91
YPT35	YHR105W	SSQ1	Q05931	657 aa	Predicted RBP	3.13	□□□□□ -1.91
YPT35	YHR105W	PBP4	Q07362	185 aa	Known RBP	3.13	□□□□□ -1.91
YPT35	YHR105W	YET3	Q07451	203 aa		3.13	□□□□□ -1.91
YPT35	YHR105W	YLL007C	Q07799	665 aa		3.13	□□□□□ -1.91
YPT35	YHR105W	IRC25	Q07951	179 aa		3.13	□□□□□ -1.91
YPT35	YHR105W	YPQ1	Q12010	308 aa		3.13	□□□□□ -1.91
YPT35	YHR105W	APC9	Q12107	265 aa		3.13	□□□□□ -1.91
YPT35	YHR105W	YDR018C	Q12185	396 aa		3.13	□□□□□ -1.91
YPT35	YHR105W	JID1	Q12350	301 aa		3.13	□□□□□ -1.91
YPT35	YHR105W	RPS3	P05750	240 aa	Known RBP	3.12	□□□□□ -1.91
YPT35	YHR105W	HIS3	P06633	220 aa		3.12	□□□□□ -1.91
YPT35	YHR105W	GPA2	P10823	449 aa		3.12	□□□□□ -1.91
YPT35	YHR105W	SEN2	P16658	377 aa		3.12	□□□□□ -1.91
YPT35	YHR105W	CMK2	P22517	447 aa		3.12	□□□□□ -1.91
YPT35	YHR105W	RBK1	P25332	333 aa		3.12	□□□□□ -1.91
YPT35	YHR105W	YKL063C	P35725	167 aa		3.12	□□□□□ -1.91
YPT35	YHR105W	MRX3	P38172	270 aa		3.12	□□□□□ -1.91
YPT35	YHR105W	LSM12	P38828	187 aa	Known RBP	3.12	□□□□□ -1.91
YPT35	YHR105W	CHL4	P38907	458 aa		3.12	□□□□□ -1.91
YPT35	YHR105W	MIG3	P39943	394 aa		3.12	□□□□□ -1.91
YPT35	YHR105W	OXA1	P39952	402 aa		3.12	□□□□□ -1.91
YPT35	YHR105W	THO1	P40040	218 aa	Known RBP	3.12	□□□□□ -1.91
YPT35	YHR105W	AVT6	P40074	448 aa		3.12	□□□□□ -1.91
YPT35	YHR105W	FAR7	P43592	221 aa		3.12	□□□□□ -1.91
YPT35	YHR105W	PMT4	P46971	762 aa		3.12	□□□□□ -1.91
YPT35	YHR105W	ALB1	P47019	175 aa	Predicted RBP	3.12	□□□□□ -1.91
YPT35	YHR105W	SEH1	P53011	349 aa	Known RBP	3.12	□□□□□ -1.91
YPT35	YHR105W	GET1	P53192	235 aa		3.12	□□□□□ -1.91
YPT35	YHR105W	TPC1	P53257	314 aa		3.12	□□□□□ -1.91
YPT35	YHR105W	SLT2	Q00772	484 aa		3.12	□□□□□ -1.91
YPT35	YHR105W	YET2	Q04210	160 aa		3.12	□□□□□ -1.91
YPT35	YHR105W	DYN3	Q04949	312 aa		3.12	□□□□□ -1.91
YPT35	YHR105W	SCW10	Q04951	389 aa		3.12	□□□□□ -1.91
YPT35	YHR105W	GMC2	Q06201	188 aa		3.12	□□□□□ -1.91
YPT35	YHR105W	YLR012C	Q07927	99 aa		3.12	□□□□□ -1.91
YPT35	YHR105W	YOR342C	Q12182	319 aa		3.12	□□□□□ -1.91
YPT35	YHR105W	RBD2	Q12270	262 aa		3.12	□□□□□ -1.91
YPT35	YHR105W	SFM1	Q12314	213 aa		3.12	□□□□□ -1.91
YPT35	YHR105W	RAD7	P06779	565 aa		3.11	□□□□□ -1.91
YPT35	YHR105W	RAD10	P06838	210 aa		3.11	□□□□□ -1.91
YPT35	YHR105W	UNG1	P12887	359 aa		3.11	□□□□□ -1.91
YPT35	YHR105W	CSM1	P25651	190 aa		3.11	□□□□□ -1.91
YPT35	YHR105W	RME1	P32338	300 aa	Known RBP	3.11	□□□□□ -1.91
YPT35	YHR105W	NUP2	P32499	720 aa		3.11	□□□□□ -1.91
YPT35	YHR105W	CYM1	P32898	989 aa		3.11	□□□□□ -1.91
YPT35	YHR105W	YUH1	P35127	236 aa		3.11	□□□□□ -1.91
YPT35	YHR105W	KDX1	P36005	433 aa		3.11	□□□□□ -1.91
YPT35	YHR105W	SLX1	P38324	304 aa		3.11	□□□□□ -1.91
YPT35	YHR105W	YBR285W	P38354	144 aa		3.11	□□□□□ -1.91
YPT35	YHR105W	PHO89	P38361	574 aa		3.11	□□□□□ -1.91
YPT35	YHR105W	PFS1	P38872	237 aa		3.11	□□□□□ -1.91
YPT35	YHR105W	TIM17	P39515	158 aa		3.11	□□□□□ -1.91
YPT35	YHR105W	YNL208W	P40159	199 aa	Known RBP	3.11	□□□□□ -1.91
YPT35	YHR105W	PEP8	P40335	379 aa		3.11	□□□□□ -1.91
YPT35	YHR105W	HPM1	P40481	377 aa		3.11	□□□□□ -1.91
YPT35	YHR105W	DFG10	P40526	253 aa		3.11	□□□□□ -1.91
YPT35	YHR105W	MRPL50	P53724	139 aa		3.11	□□□□□ -1.91
YPT35	YHR105W	CUS2	P53830	285 aa	Predicted RBP	3.11	□□□□□ -1.91
YPT35	YHR105W	PRP38	Q00723	242 aa	Predicted RBP	3.11	□□□□□ -1.91
YPT35	YHR105W	GAL83	Q04739	417 aa		3.11	□□□□□ -1.91
YPT35	YHR105W	PEX10	Q05568	337 aa		3.11	□□□□□ -1.91
YPT35	YHR105W	RDL2	Q08742	149 aa	Known RBP	3.11	□□□□□ -1.91
YPT35	YHR105W	RRG7	Q08774	242 aa	Predicted RBP	3.11	□□□□□ -1.91
YPT35	YHR105W	NSL1	Q12143	216 aa		3.11	□□□□□ -1.91
YPT35	YHR105W	TY3A-G	Q12173	290 aa		3.11	□□□□□ -1.91
YPT35	YHR105W	SIA1	Q12212	622 aa		3.11	□□□□□ -1.91
YPT35	YHR105W	TY3A-I	Q99219	290 aa		3.11	□□□□□ -1.91
YPT35	YHR105W	RHO1	P06780	209 aa	Known RBP	3.1	□□□□□ -1.91
YPT35	YHR105W	BCY1	P07278	416 aa	Known RBP	3.1	□□□□□ -1.91
YPT35	YHR105W	TCP1	P12612	559 aa	Known RBP	3.1	□□□□□ -1.91
YPT35	YHR105W	URA10	P30402	227 aa		3.1	□□□□□ -1.91
YPT35	YHR105W	ZRT1	P32804	376 aa		3.1	□□□□□ -1.91
YPT35	YHR105W	SSO1	P32867	290 aa		3.1	□□□□□ -1.91
YPT35	YHR105W	PDC2	P32896	925 aa		3.1	□□□□□ -1.91
YPT35	YHR105W	CLG1	P35190	452 aa		3.1	□□□□□ -1.91
YPT35	YHR105W	CSG2	P35206	410 aa		3.1	□□□□□ -1.91
YPT35	YHR105W	EGD2	P38879	174 aa	Known RBP	3.1	□□□□□ -1.91
YPT35	YHR105W	VMA7	P39111	118 aa		3.1	□□□□□ -1.91
YPT35	YHR105W	FHL1	P39521	936 aa		3.1	□□□□□ -1.91
YPT35	YHR105W	RCY1	P39531	840 aa		3.1	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms