RNA–Protein interactions for RNA: YFL003C

MSH4, Transcript of Protein involved in meiotic recombination, yeastyeast

Gene MSH4, Length 2,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH4YFL003C RME1P32338 300 aaKnown RBP2.51□□□□□ -2.01
MSH4YFL003C PRP18P33411 251 aaPredicted RBP2.51□□□□□ -2.01
MSH4YFL003C RFC4P40339 323 aaKnown RBP2.51□□□□□ -2.01
MSH4YFL003C YRB1P41920 201 aaKnown RBP2.51□□□□□ -2.01
MSH4YFL003C TPC1P53257 314 aa2.51□□□□□ -2.01
MSH4YFL003C RIM15P43565 1770 aa2.5□□□□□ -2.01
MSH4YFL003C RPS18AP0CX55 146 aaKnown RBP2.5□□□□□ -2.01
MSH4YFL003C RPS18BP0CX56 146 aaPredicted RBP2.5□□□□□ -2.01
MSH4YFL003C TCP1P12612 559 aaKnown RBP2.5□□□□□ -2.01
MSH4YFL003C SPS100P13130 326 aa2.5□□□□□ -2.01
MSH4YFL003C CTA1P15202 515 aa2.5□□□□□ -2.01
MSH4YFL003C APA2P22108 325 aa2.5□□□□□ -2.01
MSH4YFL003C RNA15P25299 296 aaPredicted RBP2.5□□□□□ -2.01
MSH4YFL003C CPR3P25719 182 aa2.5□□□□□ -2.01
MSH4YFL003C YBL059WP34224 193 aa2.5□□□□□ -2.01
MSH4YFL003C VPS21P36017 210 aaKnown RBP2.5□□□□□ -2.01
MSH4YFL003C ECM4P36156 370 aa2.5□□□□□ -2.01
MSH4YFL003C URA8P38627 578 aaPredicted RBP2.5□□□□□ -2.01
MSH4YFL003C THO1P40040 218 aaKnown RBP2.5□□□□□ -2.01
MSH4YFL003C MAM33P40513 266 aa2.5□□□□□ -2.01
MSH4YFL003C YIA6P40556 373 aa2.5□□□□□ -2.01
MSH4YFL003C ASG7P46993 209 aa2.5□□□□□ -2.01
MSH4YFL003C YPT32P51996 222 aaKnown RBP2.5□□□□□ -2.01
MSH4YFL003C NBP1P52919 319 aaPredicted RBP2.5□□□□□ -2.01
MSH4YFL003C CDH1P53197 566 aa2.5□□□□□ -2.01
MSH4YFL003C YNL040WP53960 456 aaPredicted RBP2.5□□□□□ -2.01
MSH4YFL003C YMR226CQ05016 267 aaKnown RBP2.5□□□□□ -2.01
MSH4YFL003C TAZ1Q06510 381 aa2.5□□□□□ -2.01
MSH4YFL003C MRX9Q07349 420 aaKnown RBP2.5□□□□□ -2.01
MSH4YFL003C MIM1Q08176 113 aa2.5□□□□□ -2.01
MSH4YFL003C YPR064WQ12492 139 aa2.5□□□□□ -2.01
MSH4YFL003C HTZ1Q12692 134 aaKnown RBP2.5□□□□□ -2.01
MSH4YFL003C STE18P18852 110 aa2.5□□□□□ -2.01
MSH4YFL003C SPT4P32914 102 aaPredicted RBP2.5□□□□□ -2.01
MSH4YFL003C MIC12P38341 106 aa2.5□□□□□ -2.01
MSH4YFL003C CHL4P38907 458 aa2.5□□□□□ -2.01
MSH4YFL003C SMB1P40018 196 aaKnown RBP2.5□□□□□ -2.01
MSH4YFL003C REX2P54964 269 aaKnown RBP2.5□□□□□ -2.01
MSH4YFL003C TRM44Q02648 567 aaKnown RBP2.5□□□□□ -2.01
MSH4YFL003C HRI1Q05905 244 aaKnown RBP2.5□□□□□ -2.01
MSH4YFL003C SFH1Q06168 426 aa2.5□□□□□ -2.01
MSH4YFL003C YLR446WQ06204 433 aa2.5□□□□□ -2.01
MSH4YFL003C LOA1Q06508 300 aa2.5□□□□□ -2.01
MSH4YFL003C RSA1Q08932 381 aa2.5□□□□□ -2.01
MSH4YFL003C ATP16Q12165 160 aa2.5□□□□□ -2.01
MSH4YFL003C RRP42Q12277 265 aaPredicted RBP2.5□□□□□ -2.01
MSH4YFL003C SME1Q12330 94 aaPredicted RBP2.5□□□□□ -2.01
MSH4YFL003C HRT3Q12347 344 aa2.5□□□□□ -2.01
MSH4YFL003C KRE5P22023 1365 aa2.5□□□□□ -2.01
MSH4YFL003C OSM1P21375 501 aaKnown RBP2.49□□□□□ -2.01
MSH4YFL003C CBT1P36038 271 aaPredicted RBP2.49□□□□□ -2.01
MSH4YFL003C SLX1P38324 304 aa2.49□□□□□ -2.01
MSH4YFL003C PTH1P38876 190 aaKnown RBP2.49□□□□□ -2.01
MSH4YFL003C PET8P38921 284 aa2.49□□□□□ -2.01
MSH4YFL003C ERG28P40030 148 aa2.49□□□□□ -2.01
MSH4YFL003C YPI1P43587 155 aa2.49□□□□□ -2.01
MSH4YFL003C MAL13P53338 473 aa2.49□□□□□ -2.01
MSH4YFL003C SEC13Q04491 297 aaKnown RBP2.49□□□□□ -2.01
MSH4YFL003C FAR10Q06001 478 aa2.49□□□□□ -2.01
MSH4YFL003C YKL183C-AQ3E765 70 aa2.49□□□□□ -2.01
MSH4YFL003C ERD1P16151 362 aa2.49□□□□□ -2.01
MSH4YFL003C MIR1P23641 311 aaKnown RBP2.49□□□□□ -2.01
MSH4YFL003C DEP1P31385 405 aa2.49□□□□□ -2.01
MSH4YFL003C KTI12P34253 313 aaKnown RBP2.49□□□□□ -2.01
MSH4YFL003C SDS24P38314 527 aa2.49□□□□□ -2.01
MSH4YFL003C RCK1P38622 512 aa2.49□□□□□ -2.01
MSH4YFL003C JHD2P47156 728 aaPredicted RBP2.49□□□□□ -2.01
MSH4YFL003C HSH155P49955 971 aaKnown RBP2.49□□□□□ -2.01
MSH4YFL003C SCS3P53012 380 aa2.49□□□□□ -2.01
MSH4YFL003C VEL1P53058 206 aa2.49□□□□□ -2.01
MSH4YFL003C MTQ1P53944 314 aa2.49□□□□□ -2.01
MSH4YFL003C CTR3Q06686 241 aa2.49□□□□□ -2.01
MSH4YFL003C DTD1Q07648 150 aaKnown RBP2.49□□□□□ -2.01
MSH4YFL003C YBR121C-AP0C5L4 52 aa2.48□□□□□ -2.01
MSH4YFL003C NAM2P11325 894 aa2.48□□□□□ -2.01
MSH4YFL003C KSS1P14681 368 aa2.48□□□□□ -2.01
MSH4YFL003C YMR31P19955 123 aa2.48□□□□□ -2.01
MSH4YFL003C PEX3P28795 441 aa2.48□□□□□ -2.01
MSH4YFL003C MRPL10P36520 322 aa2.48□□□□□ -2.01
MSH4YFL003C HAC1P41546 238 aa2.48□□□□□ -2.01
MSH4YFL003C YJR012CP47087 207 aa2.48□□□□□ -2.01
MSH4YFL003C IBA57P47158 497 aa2.48□□□□□ -2.01
MSH4YFL003C TPN1P53099 579 aa2.48□□□□□ -2.01
MSH4YFL003C ZRG17P53735 605 aa2.48□□□□□ -2.01
MSH4YFL003C YDR209CQ03480 137 aa2.48□□□□□ -2.01
MSH4YFL003C YMR010WQ03687 405 aa2.48□□□□□ -2.01
MSH4YFL003C CDC123Q05791 360 aa2.48□□□□□ -2.01
MSH4YFL003C SFM1Q12314 213 aa2.48□□□□□ -2.01
MSH4YFL003C MATALPHA2P0CY08 210 aa2.48□□□□□ -2.01
MSH4YFL003C HMLALPHA2P0CY09 210 aa2.48□□□□□ -2.01
MSH4YFL003C CBS2P14905 389 aa2.48□□□□□ -2.01
MSH4YFL003C HOM6P31116 359 aaKnown RBP2.48□□□□□ -2.01
MSH4YFL003C QRI5P32344 111 aa2.48□□□□□ -2.01
MSH4YFL003C YBR062CP38239 180 aa2.48□□□□□ -2.01
MSH4YFL003C MIG3P39943 394 aa2.48□□□□□ -2.01
MSH4YFL003C YER186CP40101 306 aa2.48□□□□□ -2.01
MSH4YFL003C DSN1P40568 576 aa2.48□□□□□ -2.01
MSH4YFL003C SNM1P40993 198 aa2.48□□□□□ -2.01
MSH4YFL003C MOB2P43563 287 aa2.48□□□□□ -2.01
MSH4YFL003C CWC23P52868 283 aaPredicted RBP2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms