RNA–Protein interactions for RNA: YDR394W

RPT3, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT3, Length 1,287 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT3	YDR394W	RFC4	P40339	323 aa	Known RBP	5.44	□□□□□ -1.54
RPT3	YDR394W	SHR5	P41912	237 aa		5.44	□□□□□ -1.54
RPT3	YDR394W	ALK1	P43633	760 aa	Known RBP	5.44	□□□□□ -1.54
RPT3	YDR394W	ECM27	P47144	725 aa		5.44	□□□□□ -1.54
RPT3	YDR394W	MTL1	P53214	551 aa		5.44	□□□□□ -1.54
RPT3	YDR394W	PBP1	P53297	722 aa	Known RBP	5.44	□□□□□ -1.54
RPT3	YDR394W	YAP6	Q03935	383 aa		5.44	□□□□□ -1.54
RPT3	YDR394W	RBS1	Q05672	457 aa	Known RBP	5.44	□□□□□ -1.54
RPT3	YDR394W	DCR2	Q05924	578 aa		5.44	□□□□□ -1.54
RPT3	YDR394W	RAX1	Q08760	435 aa		5.44	□□□□□ -1.54
RPT3	YDR394W	YOR378W	Q08902	515 aa		5.44	□□□□□ -1.54
RPT3	YDR394W	FRE3	Q08905	711 aa		5.44	□□□□□ -1.54
RPT3	YDR394W	INP53	Q12271	1107 aa		5.44	□□□□□ -1.54
RPT3	YDR394W	FSH3	Q99369	266 aa		5.44	□□□□□ -1.54
RPT3	YDR394W	URA3	P03962	267 aa		5.43	□□□□□ -1.54
RPT3	YDR394W	ADK1	P07170	222 aa	Known RBP	5.43	□□□□□ -1.54
RPT3	YDR394W	SEN2	P16658	377 aa		5.43	□□□□□ -1.54
RPT3	YDR394W	RNA14	P25298	677 aa	Known RBP	5.43	□□□□□ -1.54
RPT3	YDR394W	CWH43	P25618	953 aa		5.43	□□□□□ -1.54
RPT3	YDR394W	ERG24	P32462	438 aa	Known RBP	5.43	□□□□□ -1.54
RPT3	YDR394W	PPG1	P32838	368 aa		5.43	□□□□□ -1.54
RPT3	YDR394W	MTC4	P38335	694 aa	Known RBP	5.43	□□□□□ -1.54
RPT3	YDR394W	YHR122W	P38829	231 aa		5.43	□□□□□ -1.54
RPT3	YDR394W	VMA7	P39111	118 aa		5.43	□□□□□ -1.54
RPT3	YDR394W	PHM8	P40025	321 aa		5.43	□□□□□ -1.54
RPT3	YDR394W	SWM2	P40342	146 aa		5.43	□□□□□ -1.54
RPT3	YDR394W	YGR210C	P42942	411 aa		5.43	□□□□□ -1.54
RPT3	YDR394W	SEH1	P53011	349 aa	Known RBP	5.43	□□□□□ -1.54
RPT3	YDR394W	APM1	Q00776	475 aa	Predicted RBP	5.43	□□□□□ -1.54
RPT3	YDR394W	SCS7	Q03529	384 aa		5.43	□□□□□ -1.54
RPT3	YDR394W	EKI1	Q03764	534 aa		5.43	□□□□□ -1.54
RPT3	YDR394W	YML053C	Q04978	212 aa		5.43	□□□□□ -1.54
RPT3	YDR394W	GUP2	Q08929	609 aa		5.43	□□□□□ -1.54
RPT3	YDR394W	YOS9	Q99220	542 aa		5.43	□□□□□ -1.54
RPT3	YDR394W	ARG80	P07249	177 aa		5.42	□□□□□ -1.54
RPT3	YDR394W	MATALPHA1	P0CY06	175 aa		5.42	□□□□□ -1.54
RPT3	YDR394W	HMLALPHA1	P0CY07	175 aa		5.42	□□□□□ -1.54
RPT3	YDR394W	GLK1	P17709	500 aa	Known RBP	5.42	□□□□□ -1.54
RPT3	YDR394W	UTR1	P21373	530 aa		5.42	□□□□□ -1.54
RPT3	YDR394W	AIM17	P23180	465 aa	Known RBP	5.42	□□□□□ -1.54
RPT3	YDR394W	STE50	P25344	346 aa		5.42	□□□□□ -1.54
RPT3	YDR394W	CNE1	P27825	502 aa		5.42	□□□□□ -1.54
RPT3	YDR394W	PDR3	P33200	976 aa		5.42	□□□□□ -1.54
RPT3	YDR394W	LST4	P34239	828 aa		5.42	□□□□□ -1.54
RPT3	YDR394W	TAF14	P35189	244 aa		5.42	□□□□□ -1.54
RPT3	YDR394W	SRP102	P36057	244 aa	Predicted RBP	5.42	□□□□□ -1.54
RPT3	YDR394W	YER137C	P40083	148 aa	Known RBP	5.42	□□□□□ -1.54
RPT3	YDR394W	LTP1	P40347	161 aa		5.42	□□□□□ -1.54
RPT3	YDR394W	SYS1	P41544	203 aa		5.42	□□□□□ -1.54
RPT3	YDR394W	CAT5	P41735	233 aa		5.42	□□□□□ -1.54
RPT3	YDR394W	YJR120W	P47157	116 aa		5.42	□□□□□ -1.54
RPT3	YDR394W	VHT1	P53241	593 aa		5.42	□□□□□ -1.54
RPT3	YDR394W	MTM1	P53320	366 aa		5.42	□□□□□ -1.54
RPT3	YDR394W	RPL6A	Q02326	176 aa	Known RBP	5.42	□□□□□ -1.54
RPT3	YDR394W	SNX41	Q04053	625 aa		5.42	□□□□□ -1.54
RPT3	YDR394W	UTP15	Q04305	513 aa	Known RBP	5.42	□□□□□ -1.54
RPT3	YDR394W	PAL1	Q05518	499 aa	Known RBP	5.42	□□□□□ -1.54
RPT3	YDR394W	HRT1	Q08273	121 aa		5.42	□□□□□ -1.54
RPT3	YDR394W	BSC6	Q08280	497 aa		5.42	□□□□□ -1.54
RPT3	YDR394W	HNT3	Q08702	217 aa		5.42	□□□□□ -1.54
RPT3	YDR394W	RDR1	Q08904	546 aa		5.42	□□□□□ -1.54
RPT3	YDR394W	ATG31	Q12421	196 aa		5.42	□□□□□ -1.54
RPT3	YDR394W	SKM1	Q12469	655 aa		5.42	□□□□□ -1.54
RPT3	YDR394W	PAR32	Q12515	295 aa	Known RBP	5.42	□□□□□ -1.54
RPT3	YDR394W	CHO1	P08456	276 aa		5.41	□□□□□ -1.54
RPT3	YDR394W	YCP4	P25349	247 aa	Known RBP	5.41	□□□□□ -1.54
RPT3	YDR394W	FAA1	P30624	700 aa	Known RBP	5.41	□□□□□ -1.54
RPT3	YDR394W	PMT2	P31382	759 aa		5.41	□□□□□ -1.54
RPT3	YDR394W	ACB1	P31787	87 aa		5.41	□□□□□ -1.54
RPT3	YDR394W	WBP1	P33767	430 aa	Known RBP	5.41	□□□□□ -1.54
RPT3	YDR394W	SPT10	P35208	640 aa		5.41	□□□□□ -1.54
RPT3	YDR394W	YHR180W	P38868	163 aa		5.41	□□□□□ -1.54
RPT3	YDR394W	YJL193W	P39542	402 aa		5.41	□□□□□ -1.54
RPT3	YDR394W	LOH1	P47055	219 aa		5.41	□□□□□ -1.54
RPT3	YDR394W	LYS20	P48570	428 aa	Known RBP	5.41	□□□□□ -1.54
RPT3	YDR394W	YGR266W	P53326	701 aa		5.41	□□□□□ -1.54
RPT3	YDR394W	MPA43	P53583	542 aa	Predicted RBP	5.41	□□□□□ -1.54
RPT3	YDR394W	GIM3	P53900	129 aa		5.41	□□□□□ -1.54
RPT3	YDR394W	ASI3	P53983	676 aa		5.41	□□□□□ -1.54
RPT3	YDR394W	PRM15	Q03262	622 aa		5.41	□□□□□ -1.54
RPT3	YDR394W	COX20	Q04935	205 aa		5.41	□□□□□ -1.54
RPT3	YDR394W	MRX8	Q05473	314 aa		5.41	□□□□□ -1.54
RPT3	YDR394W	YLR224W	Q05947	369 aa		5.41	□□□□□ -1.54
RPT3	YDR394W	GAS2	Q06135	555 aa		5.41	□□□□□ -1.54
RPT3	YDR394W	TMA10	Q06177	86 aa		5.41	□□□□□ -1.54
RPT3	YDR394W	IRC19	Q07843	230 aa		5.41	□□□□□ -1.54
RPT3	YDR394W	YOL073C	Q08232	322 aa		5.41	□□□□□ -1.54
RPT3	YDR394W	YOR385W	Q08909	290 aa		5.41	□□□□□ -1.54
RPT3	YDR394W	RTK1	Q12100	620 aa	Predicted RBP	5.41	□□□□□ -1.54
RPT3	YDR394W	LYS21	Q12122	440 aa	Known RBP	5.41	□□□□□ -1.54
RPT3	YDR394W	RDI1	Q12434	202 aa		5.41	□□□□□ -1.54
RPT3	YDR394W	FMP16	Q12497	93 aa		5.41	□□□□□ -1.54
RPT3	YDR394W	YBR298C-A	Q8TGK4	73 aa		5.41	□□□□□ -1.54
RPT3	YDR394W	TAD3	Q9URQ3	322 aa		5.41	□□□□□ -1.54
RPT3	YDR394W	DSF1	P0CX08	502 aa		5.4	□□□□□ -1.54
RPT3	YDR394W	YNR073C	P0CX09	502 aa		5.4	□□□□□ -1.54
RPT3	YDR394W	RPL1A	P0CX43	217 aa	Known RBP	5.4	□□□□□ -1.54
RPT3	YDR394W	RPL1B	P0CX44	217 aa	Known RBP	5.4	□□□□□ -1.54
RPT3	YDR394W	RPB8	P20436	146 aa		5.4	□□□□□ -1.54
RPT3	YDR394W	CKS1	P20486	150 aa	Known RBP	5.4	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms