RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPC2	YDR213W	HOM2	P13663	365 aa	Known RBP	3.93	□□□□□ -1.78
UPC2	YDR213W	YMC1	P32331	307 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	3.93	□□□□□ -1.78	not detected
UPC2	YDR213W	TKL2	P33315	681 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	LOT5	P34234	306 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	RTC3	P38804	111 aa	Predicted RBP	3.93	□□□□□ -1.78
UPC2	YDR213W	FAF1	P40546	346 aa	Predicted RBP	3.93	□□□□□ -1.78
UPC2	YDR213W	SNM1	P40993	198 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	YJR056C	P47115	236 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	SOL1	P50278	321 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	EXG2	P52911	562 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	NRK1	P53915	240 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3.93	□□□□□ -1.78	not detected
UPC2	YDR213W	YSA1	Q01976	231 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	PKR1	Q03880	122 aa	Known RBP	3.93	□□□□□ -1.78
UPC2	YDR213W	CIA1	Q05583	330 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	GRX8	Q05926	109 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	TPI1	P00942	248 aa	Known RBP	3.93	□□□□□ -1.78
UPC2	YDR213W	GAL80	P04387	435 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	HOP1	P20050	605 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	PPH21	P23594	369 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	HXT4	P32467	576 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	RPD3	P32561	433 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	SUR1	P33300	382 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	TIP20	P33891	701 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	COS9	P36034	407 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	MRPL11	P36521	249 aa	Predicted RBP	3.93	□□□□□ -1.78
UPC2	YDR213W	IST3	P40565	148 aa	Predicted RBP	3.93	□□□□□ -1.78
UPC2	YDR213W	FET4	P40988	552 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	JJJ3	P47138	172 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	TEX1	P53851	422 aa	Known RBP	3.93	□□□□□ -1.78
UPC2	YDR213W	NOC4	Q06512	552 aa	Predicted RBP	3.93	□□□□□ -1.78
UPC2	YDR213W	FCF2	Q12035	217 aa	Predicted RBP	3.93	□□□□□ -1.78
UPC2	YDR213W	BTS1	Q12051	335 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	TFB5	Q3E7C1	72 aa	Predicted RBP	3.93	□□□□□ -1.78
UPC2	YDR213W	UBI4	P0CG63	381 aa	Known RBP	3.93	□□□□□ -1.78
UPC2	YDR213W	YPK2	P18961	677 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	MRS4	P23500	304 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	NFS1	P25374	497 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	CNE1	P27825	502 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	SEF1	P34228	1148 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	SAF1	P38352	637 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	TIM17	P39515	158 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	YIL060W	P40519	144 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	HXT14	P42833	540 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	NUP57	P48837	541 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	TOS2	P50078	622 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	UBP8	P50102	471 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	COQ6	P53318	479 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	ADD37	Q03233	198 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	MRPS17	Q03246	237 aa	Predicted RBP	3.93	□□□□□ -1.78
UPC2	YDR213W	HOF1	Q05080	669 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	BER1	Q06688	274 aa	Known RBP	3.93	□□□□□ -1.78
UPC2	YDR213W	PER33	Q12144	273 aa		3.93	□□□□□ -1.78
UPC2	YDR213W	TDH2	P00358	332 aa	Known RBP	3.92	□□□□□ -1.78
UPC2	YDR213W	SGA1	P08019	549 aa		3.92	□□□□□ -1.78
UPC2	YDR213W	SCH9	P11792	824 aa	Known RBP	3.92	□□□□□ -1.78
UPC2	YDR213W	AFT1	P22149	690 aa		3.92	□□□□□ -1.78
UPC2	YDR213W	MRPL8	P22353	238 aa		3.92	□□□□□ -1.78
UPC2	YDR213W	ERG24	P32462	438 aa	Known RBP	3.92	□□□□□ -1.78
UPC2	YDR213W	AVT5	P38176	459 aa		3.92	□□□□□ -1.78
UPC2	YDR213W	RRP3	P38712	501 aa	Known RBP	3.92	□□□□□ -1.78
UPC2	YDR213W	FLX1	P40464	311 aa		3.92	□□□□□ -1.78
UPC2	YDR213W	PMT3	P47190	753 aa		3.92	□□□□□ -1.78
UPC2	YDR213W	YGR015C	P53208	328 aa		3.92	□□□□□ -1.78
UPC2	YDR213W	YGR117C	P53270	476 aa		3.92	□□□□□ -1.78
UPC2	YDR213W	PAU12	P53343	120 aa		3.92	□□□□□ -1.78
UPC2	YDR213W	OAZ1	Q02803	292 aa		3.92	□□□□□ -1.78
UPC2	YDR213W	CTL1	Q03220	320 aa	Known RBP	3.92	□□□□□ -1.78
UPC2	YDR213W	RCR2	Q03446	210 aa	Known RBP	3.92	□□□□□ -1.78
UPC2	YDR213W	SEC13	Q04491	297 aa	Known RBP	3.92	□□□□□ -1.78
UPC2	YDR213W	MRX9	Q07349	420 aa	Known RBP	3.92	□□□□□ -1.78
UPC2	YDR213W	RRP42	Q12277	265 aa	Predicted RBP	3.92	□□□□□ -1.78
UPC2	YDR213W	TRM13	Q12383	476 aa		3.92	□□□□□ -1.78
UPC2	YDR213W	CDC28	P00546	298 aa	Known RBP	3.92	□□□□□ -1.78
UPC2	YDR213W	RPL25	P04456	142 aa	Known RBP	3.92	□□□□□ -1.78
UPC2	YDR213W	SPC29	P33419	253 aa		3.92	□□□□□ -1.78
UPC2	YDR213W	YKL107W	P34251	309 aa		3.92	□□□□□ -1.78
UPC2	YDR213W	YER158C	P40095	573 aa		3.92	□□□□□ -1.78
UPC2	YDR213W	POG1	P40473	351 aa		3.92	□□□□□ -1.78
UPC2	YDR213W	YJR096W	P47137	282 aa		3.92	□□□□□ -1.78
UPC2	YDR213W	MPA43	P53583	542 aa	Predicted RBP	3.92	□□□□□ -1.78
UPC2	YDR213W	YIF1	P53845	314 aa	Known RBP	3.92	□□□□□ -1.78
UPC2	YDR213W	EST3	Q03096	181 aa		3.92	□□□□□ -1.78
UPC2	YDR213W	AIM32	Q04689	311 aa		3.92	□□□□□ -1.78
UPC2	YDR213W	BOP2	Q06150	570 aa		3.92	□□□□□ -1.78
UPC2	YDR213W	CSI2	Q08054	341 aa		3.92	□□□□□ -1.78
UPC2	YDR213W	PRM4	Q12498	284 aa		3.92	□□□□□ -1.78
UPC2	YDR213W	YLR146W-A	Q2V2P1	62 aa		3.92	□□□□□ -1.78
UPC2	YDR213W	ODC2	Q99297	307 aa		3.92	□□□□□ -1.78
UPC2	YDR213W	FSH3	Q99369	266 aa		3.92	□□□□□ -1.78
UPC2	YDR213W	RPP2B	P02400	110 aa	Known RBP	3.91	□□□□□ -1.78
UPC2	YDR213W	GAL4	P04386	881 aa		3.91	□□□□□ -1.78
UPC2	YDR213W	PUT1	P09368	476 aa		3.91	□□□□□ -1.78
UPC2	YDR213W	YAR066W	P0CX18	203 aa		3.91	□□□□□ -1.78
UPC2	YDR213W	YHR214W	P0CX19	203 aa		3.91	□□□□□ -1.78
UPC2	YDR213W	STE4	P18851	423 aa		3.91	□□□□□ -1.78
UPC2	YDR213W	CPR2	P23285	205 aa		3.91	□□□□□ -1.78
UPC2	YDR213W	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.91	□□□□□ -1.78	not detected
UPC2	YDR213W	DOA4	P32571	926 aa		3.91	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms