RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeastyeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH5YDL154W NUP84P52891 726 aa1.32□□□□□ -2.2
MSH5YDL154W MPP6P53725 186 aaPredicted RBP1.32□□□□□ -2.2
MSH5YDL154W TRM44Q02648 567 aaKnown RBP1.32□□□□□ -2.2
MSH5YDL154W MRX8Q05473 314 aa1.32□□□□□ -2.2
MSH5YDL154W ARC18Q05933 178 aaKnown RBP1.32□□□□□ -2.2
MSH5YDL154W YLR012CQ07927 99 aa1.32□□□□□ -2.2
MSH5YDL154W YOR376WQ08900 122 aa1.32□□□□□ -2.2
MSH5YDL154W BI3Q9ZZW7 517 aa1.32□□□□□ -2.2
MSH5YDL154W CBP6P07253 162 aaPredicted RBP1.32□□□□□ -2.2
MSH5YDL154W KSS1P14681 368 aa1.32□□□□□ -2.2
MSH5YDL154W DBP3P20447 523 aaKnown RBP1.32□□□□□ -2.2
MSH5YDL154W IFM1P25038 676 aa1.32□□□□□ -2.2
MSH5YDL154W CDC13P32797 924 aaKnown RBP1.32□□□□□ -2.2
MSH5YDL154W PRS1P32895 427 aaKnown RBP1.32□□□□□ -2.2
MSH5YDL154W YKL063CP35725 167 aa1.32□□□□□ -2.2
MSH5YDL154W HIS2P38635 335 aa1.32□□□□□ -2.2
MSH5YDL154W CHL4P38907 458 aa1.32□□□□□ -2.2
MSH5YDL154W YIL054WP40524 105 aa1.32□□□□□ -2.2
MSH5YDL154W YRB1P41920 201 aaKnown RBP1.32□□□□□ -2.2
MSH5YDL154W YGL118CP53132 145 aa1.32□□□□□ -2.2
MSH5YDL154W BIO4P53630 237 aa1.32□□□□□ -2.2
MSH5YDL154W RMI1Q02685 241 aa1.32□□□□□ -2.2
MSH5YDL154W YPL077CQ02831 240 aa1.32□□□□□ -2.2
MSH5YDL154W INP2Q03824 705 aa1.32□□□□□ -2.2
MSH5YDL154W YPR172WQ06608 200 aa1.32□□□□□ -2.2
MSH5YDL154W TDH3P00359 332 aaKnown RBP RIP-Chip data1.31□□□□□ -2.2not detected
MSH5YDL154W MER1P16523 270 aa1.31□□□□□ -2.2
MSH5YDL154W TPO5P36029 618 aa1.31□□□□□ -2.2
MSH5YDL154W MRPL27P36526 146 aaPredicted RBP1.31□□□□□ -2.2
MSH5YDL154W SMP1P38128 452 aa1.31□□□□□ -2.2
MSH5YDL154W YPC1P38298 316 aa1.31□□□□□ -2.2
MSH5YDL154W SOP4P39543 234 aaPredicted RBP1.31□□□□□ -2.2
MSH5YDL154W YIL012WP40551 113 aa1.31□□□□□ -2.2
MSH5YDL154W CAX4P53223 239 aa1.31□□□□□ -2.2
MSH5YDL154W TPC1P53257 314 aa1.31□□□□□ -2.2
MSH5YDL154W ATC1Q04005 294 aa1.31□□□□□ -2.2
MSH5YDL154W FAR10Q06001 478 aa1.31□□□□□ -2.2
MSH5YDL154W BTS1Q12051 335 aa1.31□□□□□ -2.2
MSH5YDL154W PRP46Q12417 451 aaPredicted RBP1.31□□□□□ -2.2
MSH5YDL154W RAX2Q12465 1220 aa1.31□□□□□ -2.2
MSH5YDL154W IPP1P00817 287 aaKnown RBP1.31□□□□□ -2.2
MSH5YDL154W MRP1P10662 321 aaKnown RBP1.31□□□□□ -2.2
MSH5YDL154W MEK1P24719 497 aaPredicted RBP1.31□□□□□ -2.2
MSH5YDL154W CDC10P25342 322 aaKnown RBP1.31□□□□□ -2.2
MSH5YDL154W RPC37P36121 282 aa1.31□□□□□ -2.2
MSH5YDL154W CDC40P40968 455 aaPredicted RBP1.31□□□□□ -2.2
MSH5YDL154W ASG7P46993 209 aa1.31□□□□□ -2.2
MSH5YDL154W FLC3P53121 802 aa1.31□□□□□ -2.2
MSH5YDL154W CPD1P53314 239 aa1.31□□□□□ -2.2
MSH5YDL154W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.31□□□□□ -2.2not detected
MSH5YDL154W CWC21Q03375 135 aaKnown RBP1.31□□□□□ -2.2
MSH5YDL154W ECM18Q04623 453 aa1.31□□□□□ -2.2
MSH5YDL154W HFA1P32874 2273 aa1.31□□□□□ -2.2
MSH5YDL154W BRR2P32639 2163 aaKnown RBP1.31□□□□□ -2.2
MSH5YDL154W RPL31AP0C2H8 113 aaKnown RBP1.31□□□□□ -2.2
MSH5YDL154W IMP1P28627 190 aa1.31□□□□□ -2.2
MSH5YDL154W YKL187CP34231 750 aa1.31□□□□□ -2.2
MSH5YDL154W PET8P38921 284 aa1.31□□□□□ -2.2
MSH5YDL154W RCY1P39531 840 aa1.31□□□□□ -2.2
MSH5YDL154W FRT2P39734 528 aa1.31□□□□□ -2.2
MSH5YDL154W KRE29P40026 464 aa1.31□□□□□ -2.2
MSH5YDL154W ALD5P40047 520 aaKnown RBP1.31□□□□□ -2.2
MSH5YDL154W SPP2Q02521 185 aa1.31□□□□□ -2.2
MSH5YDL154W GMC2Q06201 188 aa1.31□□□□□ -2.2
MSH5YDL154W YOL024WQ08172 172 aa1.31□□□□□ -2.2
MSH5YDL154W YOL107WQ12239 342 aa1.31□□□□□ -2.2
MSH5YDL154W YAL067W-AQ8TGK6 75 aa1.31□□□□□ -2.2
MSH5YDL154W ADH1P00330 348 aaKnown RBP1.3□□□□□ -2.2
MSH5YDL154W SSO1P32867 290 aa1.3□□□□□ -2.2
MSH5YDL154W SPT4P32914 102 aaPredicted RBP1.3□□□□□ -2.2
MSH5YDL154W ZRT3P34240 503 aa1.3□□□□□ -2.2
MSH5YDL154W RCK1P38622 512 aa1.3□□□□□ -2.2
MSH5YDL154W SLM1P40485 686 aa1.3□□□□□ -2.2
MSH5YDL154W LOC1P43586 204 aaPredicted RBP1.3□□□□□ -2.2
MSH5YDL154W COQ5P49017 307 aa1.3□□□□□ -2.2
MSH5YDL154W UBC13P52490 153 aa1.3□□□□□ -2.2
MSH5YDL154W SDS23P53172 527 aa1.3□□□□□ -2.2
MSH5YDL154W COG7P53195 279 aa1.3□□□□□ -2.2
MSH5YDL154W DPP1Q05521 289 aa1.3□□□□□ -2.2
MSH5YDL154W YLR446WQ06204 433 aa1.3□□□□□ -2.2
MSH5YDL154W GGA1Q06336 557 aa1.3□□□□□ -2.2
MSH5YDL154W RPS3P05750 240 aaKnown RBP1.3□□□□□ -2.2
MSH5YDL154W TIP20P33891 701 aa1.3□□□□□ -2.2
MSH5YDL154W YUH1P35127 236 aa1.3□□□□□ -2.2
MSH5YDL154W SEO1P39709 593 aa1.3□□□□□ -2.2
MSH5YDL154W MIC19P43594 170 aa1.3□□□□□ -2.2
MSH5YDL154W YNR066CP53752 436 aa1.3□□□□□ -2.2
MSH5YDL154W GIM3P53900 129 aa1.3□□□□□ -2.2
MSH5YDL154W SCS7Q03529 384 aa1.3□□□□□ -2.2
MSH5YDL154W YMR244WQ04018 355 aa1.3□□□□□ -2.2
MSH5YDL154W PER33Q12144 273 aa1.3□□□□□ -2.2
MSH5YDL154W YRA1Q12159 226 aaKnown RBP1.3□□□□□ -2.2
MSH5YDL154W YDR524C-BQ3E6R4 66 aa1.3□□□□□ -2.2
MSH5YDL154W CCH1P50077 2039 aa1.29□□□□□ -2.2
MSH5YDL154W URA2P07259 2214 aaKnown RBP1.29□□□□□ -2.2
MSH5YDL154W YMR316C-AI2HB70 103 aa1.29□□□□□ -2.2
MSH5YDL154W DAL5P15365 543 aa1.29□□□□□ -2.2
MSH5YDL154W SEN2P16658 377 aa1.29□□□□□ -2.2
MSH5YDL154W MET16P18408 261 aaPredicted RBP1.29□□□□□ -2.2
MSH5YDL154W GCG1P32656 232 aaKnown RBP1.29□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 24 ms