RNA–Protein interactions for RNA: YDL150W

RPC53, Transcript of RNA polymerase III subunit C53, yeast

Gene RPC53, Length 1,269 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	YDL150W	LYS12	P40495	371 aa	Known RBP	3.95	□□□□□ -1.78
RPC53	YDL150W	YFL067W	P43537	175 aa		3.95	□□□□□ -1.78
RPC53	YDL150W	WSC2	P53832	503 aa		3.95	□□□□□ -1.78
RPC53	YDL150W	SED5	Q01590	340 aa		3.95	□□□□□ -1.78
RPC53	YDL150W	BET5	Q03630	159 aa		3.95	□□□□□ -1.78
RPC53	YDL150W	YOL131W	Q08270	108 aa		3.95	□□□□□ -1.78
RPC53	YDL150W	RAD7	P06779	565 aa		3.94	□□□□□ -1.78
RPC53	YDL150W	YAK1	P14680	807 aa		3.94	□□□□□ -1.78
RPC53	YDL150W	MDL1	P33310	695 aa		3.94	□□□□□ -1.78
RPC53	YDL150W	SKG1	P36169	355 aa		3.94	□□□□□ -1.78
RPC53	YDL150W	RIB5	P38145	238 aa		3.94	□□□□□ -1.78
RPC53	YDL150W	MED8	P38304	223 aa		3.94	□□□□□ -1.78
RPC53	YDL150W	MNN9	P39107	395 aa	Known RBP	3.94	□□□□□ -1.78
RPC53	YDL150W	GDI1	P39958	451 aa	Known RBP	3.94	□□□□□ -1.78
RPC53	YDL150W	FMP33	P46998	180 aa		3.94	□□□□□ -1.78
RPC53	YDL150W	STE24	P47154	453 aa		3.94	□□□□□ -1.78
RPC53	YDL150W	PAC10	P48363	199 aa		3.94	□□□□□ -1.78
RPC53	YDL150W	TRM9	P49957	279 aa		3.94	□□□□□ -1.78
RPC53	YDL150W	YNL095C	P53932	642 aa		3.94	□□□□□ -1.78
RPC53	YDL150W	SKI8	Q02793	397 aa	Predicted RBP	3.94	□□□□□ -1.78
RPC53	YDL150W	PEX12	Q04370	399 aa		3.94	□□□□□ -1.78
RPC53	YDL150W	ARR1	Q06596	294 aa		3.94	□□□□□ -1.78
RPC53	YDL150W	GPI11	Q06636	219 aa		3.94	□□□□□ -1.78
RPC53	YDL150W	MFG1	Q07684	458 aa		3.94	□□□□□ -1.78
RPC53	YDL150W	YLR108C	Q12259	485 aa		3.94	□□□□□ -1.78
RPC53	YDL150W	SKS1	Q12505	502 aa		3.94	□□□□□ -1.78
RPC53	YDL150W	PAR32	Q12515	295 aa	Known RBP	3.94	□□□□□ -1.78
RPC53	YDL150W	YCL021W-A	Q96VH3	125 aa		3.94	□□□□□ -1.78
RPC53	YDL150W	TIM9	O74700	87 aa		3.93	□□□□□ -1.78
RPC53	YDL150W	ILV5	P06168	395 aa	Known RBP	3.93	□□□□□ -1.78
RPC53	YDL150W	CMK2	P22517	447 aa		3.93	□□□□□ -1.78
RPC53	YDL150W	CHA1	P25379	360 aa	Known RBP	3.93	□□□□□ -1.78
RPC53	YDL150W	NTG1	P31378	399 aa		3.93	□□□□□ -1.78
RPC53	YDL150W	RRP4	P38792	359 aa	Known RBP	3.93	□□□□□ -1.78
RPC53	YDL150W	GAT2	P40209	560 aa		3.93	□□□□□ -1.78
RPC53	YDL150W	YPI1	P43587	155 aa		3.93	□□□□□ -1.78
RPC53	YDL150W	YNR068C	P53754	272 aa		3.93	□□□□□ -1.78
RPC53	YDL150W	PEX25	Q02969	394 aa		3.93	□□□□□ -1.78
RPC53	YDL150W	ATG38	Q05789	226 aa	Known RBP	3.93	□□□□□ -1.78
RPC53	YDL150W	THP3	Q12049	470 aa	Known RBP	3.93	□□□□□ -1.78
RPC53	YDL150W	PSY3	Q12318	242 aa		3.93	□□□□□ -1.78
RPC53	YDL150W	PFK27	Q12471	397 aa	Predicted RBP	3.93	□□□□□ -1.78
RPC53	YDL150W	MHF2	Q3E829	80 aa		3.93	□□□□□ -1.78
RPC53	YDL150W	GAL3	P13045	520 aa		3.92	□□□□□ -1.78
RPC53	YDL150W	MER1	P16523	270 aa		3.92	□□□□□ -1.78
RPC53	YDL150W	MKK1	P32490	508 aa		3.92	□□□□□ -1.78
RPC53	YDL150W	LHP1	P33399	275 aa	Known RBP	3.92	□□□□□ -1.78
RPC53	YDL150W	AST1	P35183	429 aa		3.92	□□□□□ -1.78
RPC53	YDL150W	DOA1	P36037	715 aa		3.92	□□□□□ -1.78
RPC53	YDL150W	MRPL15	P36523	253 aa		3.92	□□□□□ -1.78
RPC53	YDL150W	YBR241C	P38142	488 aa		3.92	□□□□□ -1.78
RPC53	YDL150W	YHR177W	P38867	453 aa		3.92	□□□□□ -1.78
RPC53	YDL150W	PRP39	P39682	629 aa	Known RBP	3.92	□□□□□ -1.78
RPC53	YDL150W	RBG1	P39729	369 aa		3.92	□□□□□ -1.78
RPC53	YDL150W	RMR1	P53060	241 aa		3.92	□□□□□ -1.78
RPC53	YDL150W	CDH1	P53197	566 aa		3.92	□□□□□ -1.78
RPC53	YDL150W	WTM1	Q12363	437 aa	Known RBP	3.92	□□□□□ -1.78
RPC53	YDL150W	YDL199C	Q12407	687 aa		3.92	□□□□□ -1.78
RPC53	YDL150W	PDE2	P06776	526 aa		3.91	□□□□□ -1.78
RPC53	YDL150W	ZWF1	P11412	505 aa	Known RBP	3.91	□□□□□ -1.78
RPC53	YDL150W	SNF4	P12904	322 aa		3.91	□□□□□ -1.78
RPC53	YDL150W	ARO3	P14843	370 aa	Known RBP	3.91	□□□□□ -1.78
RPC53	YDL150W	RPB5	P20434	215 aa		3.91	□□□□□ -1.78
RPC53	YDL150W	DBP3	P20447	523 aa	Known RBP	3.91	□□□□□ -1.78
RPC53	YDL150W	MXR2	P25566	168 aa		3.91	□□□□□ -1.78
RPC53	YDL150W	PUP2	P32379	260 aa		3.91	□□□□□ -1.78
RPC53	YDL150W	GDH2	P33327	1092 aa	Known RBP	3.91	□□□□□ -1.78
RPC53	YDL150W	NUF2	P33895	451 aa		3.91	□□□□□ -1.78
RPC53	YDL150W	VPS51	P36116	164 aa		3.91	□□□□□ -1.78
RPC53	YDL150W	RIB1	P38066	345 aa		3.91	□□□□□ -1.78
RPC53	YDL150W	YIL086C	P40503	102 aa		3.91	□□□□□ -1.78
RPC53	YDL150W	OST1	P41543	476 aa	Known RBP	3.91	□□□□□ -1.78
RPC53	YDL150W	RPS12	P48589	143 aa	Known RBP	3.91	□□□□□ -1.78
RPC53	YDL150W	ATP22	P50273	684 aa	Predicted RBP	3.91	□□□□□ -1.78
RPC53	YDL150W	SPR6	Q01684	191 aa		3.91	□□□□□ -1.78
RPC53	YDL150W	KRE28	Q04431	385 aa		3.91	□□□□□ -1.78
RPC53	YDL150W	YMR310C	Q04867	317 aa	Predicted RBP	3.91	□□□□□ -1.78
RPC53	YDL150W	SPO77	Q06134	477 aa		3.91	□□□□□ -1.78
RPC53	YDL150W	DTD1	Q07648	150 aa	Known RBP	3.91	□□□□□ -1.78
RPC53	YDL150W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	3.91	□□□□□ -1.78	not detected
RPC53	YDL150W	FDH1	Q08911	376 aa		3.91	□□□□□ -1.78
RPC53	YDL150W	SRL2	Q12020	392 aa		3.91	□□□□□ -1.78
RPC53	YDL150W	FBA1	P14540	359 aa	Known RBP	3.9	□□□□□ -1.79
RPC53	YDL150W	RPS1B	P23248	255 aa	Known RBP	3.9	□□□□□ -1.79
RPC53	YDL150W	GRR1	P24814	1151 aa		3.9	□□□□□ -1.79
RPC53	YDL150W	YCL042W	P25572	119 aa		3.9	□□□□□ -1.79
RPC53	YDL150W	UBC8	P28263	218 aa		3.9	□□□□□ -1.79
RPC53	YDL150W	ITR1	P30605	584 aa		3.9	□□□□□ -1.79
RPC53	YDL150W	CYS4	P32582	507 aa	Known RBP	3.9	□□□□□ -1.79
RPC53	YDL150W	RPS27A	P35997	82 aa	Known RBP	3.9	□□□□□ -1.79
RPC53	YDL150W	RPS27B	P38711	82 aa		3.9	□□□□□ -1.79
RPC53	YDL150W	BIG1	P38813	335 aa		3.9	□□□□□ -1.79
RPC53	YDL150W	MTC6	P38849	526 aa		3.9	□□□□□ -1.79
RPC53	YDL150W	THO1	P40040	218 aa	Known RBP	3.9	□□□□□ -1.79
RPC53	YDL150W	VMA10	P48836	114 aa	Known RBP	3.9	□□□□□ -1.79
RPC53	YDL150W	IGO1	P53897	168 aa		3.9	□□□□□ -1.79
RPC53	YDL150W	DBP9	Q06218	594 aa	Known RBP	3.9	□□□□□ -1.79
RPC53	YDL150W	RRP9	Q06506	573 aa	Known RBP	3.9	□□□□□ -1.79
RPC53	YDL150W	NDL1	Q06568	189 aa		3.9	□□□□□ -1.79
RPC53	YDL150W	RRT8	Q08219	342 aa		3.9	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms