RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W GMC2Q06201 188 aa3.34□□□□□ -1.87
TSR1YDL060W PAM18Q07914 168 aa3.34□□□□□ -1.87
TSR1YDL060W SYC1Q08553 188 aaPredicted RBP3.34□□□□□ -1.87
TSR1YDL060W FEX1Q08913 375 aa3.34□□□□□ -1.87
TSR1YDL060W YLR126CQ12288 251 aa3.34□□□□□ -1.87
TSR1YDL060W YOR338WQ99326 363 aa3.34□□□□□ -1.87
TSR1YDL060W ATP1P07251 545 aaKnown RBP3.34□□□□□ -1.87
TSR1YDL060W RPB8P20436 146 aa3.34□□□□□ -1.87
TSR1YDL060W UTR1P21373 530 aa3.34□□□□□ -1.87
TSR1YDL060W FUN26P31381 517 aa3.34□□□□□ -1.87
TSR1YDL060W DOA1P36037 715 aa3.34□□□□□ -1.87
TSR1YDL060W CBT1P36038 271 aaPredicted RBP3.34□□□□□ -1.87
TSR1YDL060W MAL32P38158 584 aa3.34□□□□□ -1.87
TSR1YDL060W ARN1P38731 627 aa3.34□□□□□ -1.87
TSR1YDL060W BIG1P38813 335 aa3.34□□□□□ -1.87
TSR1YDL060W FLO5P38894 1075 aa3.34□□□□□ -1.87
TSR1YDL060W AIM2P39721 246 aa3.34□□□□□ -1.87
TSR1YDL060W GTT1P40582 234 aa3.34□□□□□ -1.87
TSR1YDL060W COS4P43542 379 aa3.34□□□□□ -1.87
TSR1YDL060W HIT1P46973 164 aa3.34□□□□□ -1.87
TSR1YDL060W ASG7P46993 209 aa3.34□□□□□ -1.87
TSR1YDL060W LSM8P47093 109 aaKnown RBP3.34□□□□□ -1.87
TSR1YDL060W RSM27P53305 110 aa3.34□□□□□ -1.87
TSR1YDL060W MAL12P53341 584 aa3.34□□□□□ -1.87
TSR1YDL060W COS1P53822 381 aa3.34□□□□□ -1.87
TSR1YDL060W NOP13P53883 403 aaKnown RBP RIP-Chip data3.34□□□□□ -1.87not detected
TSR1YDL060W ARK1P53974 638 aa3.34□□□□□ -1.87
TSR1YDL060W GAL83Q04739 417 aa3.34□□□□□ -1.87
TSR1YDL060W DIC1Q06143 298 aa3.34□□□□□ -1.87
TSR1YDL060W YPR091CQ06833 770 aa3.34□□□□□ -1.87
TSR1YDL060W SSK1Q07084 712 aa3.34□□□□□ -1.87
TSR1YDL060W YDR018CQ12185 396 aa3.34□□□□□ -1.87
TSR1YDL060W YOR214CQ12282 236 aa3.34□□□□□ -1.87
TSR1YDL060W ATP6P00854 259 aa3.33□□□□□ -1.88
TSR1YDL060W HEM2P05373 342 aa3.33□□□□□ -1.88
TSR1YDL060W YPK2P18961 677 aa3.33□□□□□ -1.88
TSR1YDL060W YSR3P23501 404 aa3.33□□□□□ -1.88
TSR1YDL060W GIT1P25346 518 aa3.33□□□□□ -1.88
TSR1YDL060W CPR3P25719 182 aa3.33□□□□□ -1.88
TSR1YDL060W SNC1P31109 117 aa3.33□□□□□ -1.88
TSR1YDL060W VMA5P31412 392 aaKnown RBP3.33□□□□□ -1.88
TSR1YDL060W TOA2P32774 122 aa3.33□□□□□ -1.88
TSR1YDL060W PTM1P32857 523 aa3.33□□□□□ -1.88
TSR1YDL060W AIM29P36154 155 aa3.33□□□□□ -1.88
TSR1YDL060W ARN2P38724 620 aa3.33□□□□□ -1.88
TSR1YDL060W GEP4P38812 185 aa3.33□□□□□ -1.88
TSR1YDL060W PHO90P39535 881 aa3.33□□□□□ -1.88
TSR1YDL060W GNA1P43577 159 aaPredicted RBP3.33□□□□□ -1.88
TSR1YDL060W MRX5P47007 382 aa3.33□□□□□ -1.88
TSR1YDL060W AIM24P47127 394 aa3.33□□□□□ -1.88
TSR1YDL060W AIF1P52923 378 aa3.33□□□□□ -1.88
TSR1YDL060W SCS3P53012 380 aa3.33□□□□□ -1.88
TSR1YDL060W EFM5P53200 248 aaKnown RBP3.33□□□□□ -1.88
TSR1YDL060W IRC4Q03036 179 aa3.33□□□□□ -1.88
TSR1YDL060W YMR034CQ05131 434 aaPredicted RBP3.33□□□□□ -1.88
TSR1YDL060W SWC7Q06707 132 aa3.33□□□□□ -1.88
TSR1YDL060W REX4Q08237 289 aa3.33□□□□□ -1.88
TSR1YDL060W FEX2Q08991 375 aa3.33□□□□□ -1.88
TSR1YDL060W SIA1Q12212 622 aa3.33□□□□□ -1.88
TSR1YDL060W ORT1Q12375 292 aa3.33□□□□□ -1.88
TSR1YDL060W SET6Q12529 373 aa3.33□□□□□ -1.88
TSR1YDL060W FLO1P32768 1537 aa3.33□□□□□ -1.88
TSR1YDL060W FLO11P08640 1367 aa3.33□□□□□ -1.88
TSR1YDL060W PBN1P25580 416 aa3.33□□□□□ -1.88
TSR1YDL060W ERG9P29704 444 aa3.33□□□□□ -1.88
TSR1YDL060W HYM1P32464 399 aa3.33□□□□□ -1.88
TSR1YDL060W ASK1P35734 292 aa3.33□□□□□ -1.88
TSR1YDL060W LDB7P38210 180 aa3.33□□□□□ -1.88
TSR1YDL060W YBR013CP38215 129 aa3.33□□□□□ -1.88
TSR1YDL060W ATG12P38316 186 aa3.33□□□□□ -1.88
TSR1YDL060W ISC1P40015 477 aaKnown RBP3.33□□□□□ -1.88
TSR1YDL060W NUP100Q02629 959 aa3.33□□□□□ -1.88
TSR1YDL060W SLD5Q03406 294 aa3.33□□□□□ -1.88
TSR1YDL060W GAS3Q03655 524 aa3.33□□□□□ -1.88
TSR1YDL060W IVY1Q04934 453 aa3.33□□□□□ -1.88
TSR1YDL060W GRS2Q06817 618 aa3.33□□□□□ -1.88
TSR1YDL060W HRT3Q12347 344 aa3.33□□□□□ -1.88
TSR1YDL060W YKL018C-AQ3E7A7 99 aa3.33□□□□□ -1.88
TSR1YDL060W BI3Q9ZZW7 517 aa3.33□□□□□ -1.88
TSR1YDL060W CKS1P20486 150 aaKnown RBP3.32□□□□□ -1.88
TSR1YDL060W PPA2P28239 310 aa3.32□□□□□ -1.88
TSR1YDL060W CAM1P29547 415 aaKnown RBP3.32□□□□□ -1.88
TSR1YDL060W ATG7P38862 630 aa3.32□□□□□ -1.88
TSR1YDL060W FHL1P39521 936 aa3.32□□□□□ -1.88
TSR1YDL060W MTW1P39731 289 aa3.32□□□□□ -1.88
TSR1YDL060W RGI1P40043 161 aaPredicted RBP3.32□□□□□ -1.88
TSR1YDL060W SLM1P40485 686 aa3.32□□□□□ -1.88
TSR1YDL060W PAM16P42949 149 aa3.32□□□□□ -1.88
TSR1YDL060W LSM1P47017 172 aaKnown RBP3.32□□□□□ -1.88
TSR1YDL060W YIP1P53039 248 aa3.32□□□□□ -1.88
TSR1YDL060W RLI1Q03195 608 aaKnown RBP3.32□□□□□ -1.88
TSR1YDL060W CSN9Q03981 162 aa3.32□□□□□ -1.88
TSR1YDL060W YOR283WQ12040 230 aaKnown RBP3.32□□□□□ -1.88
TSR1YDL060W NSL1Q12143 216 aa3.32□□□□□ -1.88
TSR1YDL060W TRM10Q12400 293 aa3.32□□□□□ -1.88
TSR1YDL060W YCL001W-BQ96VH2 84 aa3.32□□□□□ -1.88
TSR1YDL060W MED11Q99278 115 aa3.32□□□□□ -1.88
TSR1YDL060W GSC2P40989 1895 aa3.32□□□□□ -1.88
TSR1YDL060W GAL4P04386 881 aa3.32□□□□□ -1.88
TSR1YDL060W NHP6BP11633 99 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms