RNA–Protein interactions for RNA: YCR097W

HMRA1, Transcript of Silenced copy of a1 at HMR, yeastyeast

Gene HMRA1, Length 381 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HMRA1YCR097W VAR1P02381 398 aa0.04□□□□□ -2.4
HMRA1YCR097W STE3P06783 470 aa0.04□□□□□ -2.4
HMRA1YCR097W VMA2P16140 517 aaKnown RBP0.04□□□□□ -2.4
HMRA1YCR097W SCL1P21243 252 aaKnown RBP0.04□□□□□ -2.4
HMRA1YCR097W AEP1P32493 518 aa0.04□□□□□ -2.4
HMRA1YCR097W VMA8P32610 256 aaKnown RBP0.04□□□□□ -2.4
HMRA1YCR097W ARN2P38724 620 aa0.04□□□□□ -2.4
HMRA1YCR097W SEC28P40509 296 aaKnown RBP0.04□□□□□ -2.4
HMRA1YCR097W NIF3P53081 288 aa0.04□□□□□ -2.4
HMRA1YCR097W SUB1P54000 292 aaKnown RBP0.04□□□□□ -2.4
HMRA1YCR097W RIO1Q12196 484 aaKnown RBP0.04□□□□□ -2.4
HMRA1YCR097W SMT3Q12306 101 aaKnown RBP0.04□□□□□ -2.4
HMRA1YCR097W YDR262WQ12331 272 aa0.04□□□□□ -2.4
HMRA1YCR097W PST1Q12355 444 aa0.04□□□□□ -2.4
HMRA1YCR097W YPR064WQ12492 139 aa0.04□□□□□ -2.4
HMRA1YCR097W NBL1Q3E7Y6 73 aa0.04□□□□□ -2.4
HMRA1YCR097W FKS1P38631 1876 aaKnown RBP0.03□□□□□ -2.4
HMRA1YCR097W GDH2P33327 1092 aaKnown RBP0.03□□□□□ -2.4
HMRA1YCR097W MAL32P38158 584 aa0.03□□□□□ -2.4
HMRA1YCR097W TEM1P38987 245 aa0.03□□□□□ -2.4
HMRA1YCR097W RPL13BP40212 199 aaKnown RBP0.03□□□□□ -2.4
HMRA1YCR097W MAL12P53341 584 aa0.03□□□□□ -2.4
HMRA1YCR097W BUD25P85052 153 aa0.03□□□□□ -2.4
HMRA1YCR097W CYT2Q00873 224 aa0.03□□□□□ -2.4
HMRA1YCR097W YML018CQ03730 393 aa0.03□□□□□ -2.4
HMRA1YCR097W AIM36Q03798 255 aa0.03□□□□□ -2.4
HMRA1YCR097W GEP5Q12393 293 aa0.03□□□□□ -2.4
HMRA1YCR097W RPL13AQ12690 199 aaPredicted RBP0.03□□□□□ -2.4
HMRA1YCR097W RPL31AP0C2H8 113 aaKnown RBP0.02□□□□□ -2.41
HMRA1YCR097W DSF1P0CX08 502 aa0.02□□□□□ -2.41
HMRA1YCR097W YNR073CP0CX09 502 aa0.02□□□□□ -2.41
HMRA1YCR097W RPS0AP32905 252 aaKnown RBP0.02□□□□□ -2.41
HMRA1YCR097W DAD2P36162 133 aa0.02□□□□□ -2.41
HMRA1YCR097W TCD1P38756 429 aa0.02□□□□□ -2.41
HMRA1YCR097W AVT2P39981 480 aa0.02□□□□□ -2.41
HMRA1YCR097W INA22P40576 216 aa0.02□□□□□ -2.41
HMRA1YCR097W OKP1P53298 406 aa0.02□□□□□ -2.41
HMRA1YCR097W ERV29P53337 310 aa0.02□□□□□ -2.41
HMRA1YCR097W YMR209CQ03648 457 aa0.02□□□□□ -2.41
HMRA1YCR097W DPP1Q05521 289 aa0.02□□□□□ -2.41
HMRA1YCR097W TAZ1Q06510 381 aa0.02□□□□□ -2.41
HMRA1YCR097W PBP4Q07362 185 aaKnown RBP0.02□□□□□ -2.41
HMRA1YCR097W SLD7Q08457 257 aa0.02□□□□□ -2.41
HMRA1YCR097W SAM4Q08985 325 aaKnown RBP0.02□□□□□ -2.41
HMRA1YCR097W ATO3Q12359 275 aa0.02□□□□□ -2.41
HMRA1YCR097W RPS3P05750 240 aaKnown RBP0.01□□□□□ -2.41
HMRA1YCR097W CPA1P07258 411 aaKnown RBP0.01□□□□□ -2.41
HMRA1YCR097W CAM1P29547 415 aaKnown RBP0.01□□□□□ -2.41
HMRA1YCR097W SUA5P32579 426 aa0.01□□□□□ -2.41
HMRA1YCR097W SWI3P32591 825 aa0.01□□□□□ -2.41
HMRA1YCR097W YHR022CP38763 256 aa0.01□□□□□ -2.41
HMRA1YCR097W GDS1P41913 522 aa0.01□□□□□ -2.41
HMRA1YCR097W MDM34P53083 459 aa0.01□□□□□ -2.41
HMRA1YCR097W EOS1P53938 366 aa0.01□□□□□ -2.41
HMRA1YCR097W MRPS8Q03799 155 aa0.01□□□□□ -2.41
HMRA1YCR097W MEU1Q07938 337 aaKnown RBP RIP-Chip data0.01□□□□□ -2.41not detected
HMRA1YCR097W RPL18AP0CX49 186 aaKnown RBP0□□□□□ -2.41
HMRA1YCR097W RPL18BP0CX50 186 aaKnown RBP0□□□□□ -2.41
HMRA1YCR097W PPH21P23594 369 aa0□□□□□ -2.41
HMRA1YCR097W HMT1P38074 348 aa0□□□□□ -2.41
HMRA1YCR097W RXT2P38255 430 aa0□□□□□ -2.41
HMRA1YCR097W PHO88P38264 188 aaPredicted RBP0□□□□□ -2.41
HMRA1YCR097W DOG1P38774 246 aa0□□□□□ -2.41
HMRA1YCR097W LRP1P38801 184 aaKnown RBP0□□□□□ -2.41
HMRA1YCR097W OST2P46964 130 aa0□□□□□ -2.41
HMRA1YCR097W YJL028WP47062 111 aa0□□□□□ -2.41
HMRA1YCR097W FMP41P53889 259 aaKnown RBP0□□□□□ -2.41
HMRA1YCR097W ASI3P53983 676 aa0□□□□□ -2.41
HMRA1YCR097W BOP2Q06150 570 aa0□□□□□ -2.41
HMRA1YCR097W YLR162WQ06235 118 aa0□□□□□ -2.41
HMRA1YCR097W YOR114WQ12219 294 aa0□□□□□ -2.41
HMRA1YCR097W FLO9P39712 1322 aa-0.01□□□□□ -2.41
HMRA1YCR097W RNR2P09938 399 aaKnown RBP-0.01□□□□□ -2.41
HMRA1YCR097W GPA2P10823 449 aa-0.01□□□□□ -2.41
HMRA1YCR097W MSS116P15424 664 aaKnown RBP-0.01□□□□□ -2.41
HMRA1YCR097W MDH3P32419 343 aaKnown RBP RIP-Chip data-0.01□□□□□ -2.41not detected
HMRA1YCR097W UPS2P35200 230 aa-0.01□□□□□ -2.41
HMRA1YCR097W SIF2P38262 535 aa-0.01□□□□□ -2.41
HMRA1YCR097W NPT1P39683 429 aaKnown RBP-0.01□□□□□ -2.41
HMRA1YCR097W YIA6P40556 373 aa-0.01□□□□□ -2.41
HMRA1YCR097W AGX1P43567 385 aa-0.01□□□□□ -2.41
HMRA1YCR097W MPP10P47083 593 aaKnown RBP-0.01□□□□□ -2.41
HMRA1YCR097W VPS60Q03390 229 aa-0.01□□□□□ -2.41
HMRA1YCR097W YMR007WQ03675 126 aa-0.01□□□□□ -2.41
HMRA1YCR097W TAF9Q05027 157 aa-0.01□□□□□ -2.41
HMRA1YCR097W YHR032W-AP0C5N6 59 aa-0.02□□□□□ -2.41
HMRA1YCR097W DDI2P0CH63 225 aa-0.02□□□□□ -2.41
HMRA1YCR097W DDI3P0CH64 225 aa-0.02□□□□□ -2.41
HMRA1YCR097W TAL1P15019 335 aaKnown RBP-0.02□□□□□ -2.41
HMRA1YCR097W SPT4P32914 102 aaPredicted RBP-0.02□□□□□ -2.41
HMRA1YCR097W YKL063CP35725 167 aa-0.02□□□□□ -2.41
HMRA1YCR097W YKL162CP36052 402 aa-0.02□□□□□ -2.41
HMRA1YCR097W SWD2P36104 329 aaPredicted RBP-0.02□□□□□ -2.41
HMRA1YCR097W UIP5P36137 443 aa-0.02□□□□□ -2.41
HMRA1YCR097W ADH5P38113 351 aaKnown RBP-0.02□□□□□ -2.41
HMRA1YCR097W CUE3P53137 624 aaKnown RBP-0.02□□□□□ -2.41
HMRA1YCR097W YGR219WP53307 113 aa-0.02□□□□□ -2.41
HMRA1YCR097W APC9Q12107 265 aa-0.02□□□□□ -2.41
HMRA1YCR097W SKS1Q12505 502 aa-0.02□□□□□ -2.41
HMRA1YCR097W PET494P07390 489 aaPredicted RBP-0.03□□□□□ -2.41
Retrieved 100 of 5,963 RNA–protein pairs in 42 ms