RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W ASF2P32448 525 aaPredicted RBP3.81□□□□□ -1.8
CKS1YBR135W SLM1P40485 686 aa3.81□□□□□ -1.8
CKS1YBR135W GCN20P43535 752 aaKnown RBP3.81□□□□□ -1.8
CKS1YBR135W RPL21AQ02753 160 aaKnown RBP3.81□□□□□ -1.8
CKS1YBR135W YMR321CQ04898 105 aa3.81□□□□□ -1.8
CKS1YBR135W UTP23Q12339 254 aaKnown RBP3.81□□□□□ -1.8
CKS1YBR135W FMP16Q12497 93 aa3.81□□□□□ -1.8
CKS1YBR135W MYO1P08964 1928 aa3.8□□□□□ -1.8
CKS1YBR135W ADH1P00330 348 aaKnown RBP3.8□□□□□ -1.8
CKS1YBR135W TIP20P33891 701 aa3.8□□□□□ -1.8
CKS1YBR135W MCH2P36032 473 aa3.8□□□□□ -1.8
CKS1YBR135W DBP7P36120 742 aaKnown RBP3.8□□□□□ -1.8
CKS1YBR135W SMP1P38128 452 aa3.8□□□□□ -1.8
CKS1YBR135W PET8P38921 284 aa3.8□□□□□ -1.8
CKS1YBR135W GGC1P38988 300 aa3.8□□□□□ -1.8
CKS1YBR135W CGR1P53188 120 aa3.8□□□□□ -1.8
CKS1YBR135W YGR018CP53211 109 aa3.8□□□□□ -1.8
CKS1YBR135W SED5Q01590 340 aa3.8□□□□□ -1.8
CKS1YBR135W API2Q04413 109 aa3.8□□□□□ -1.8
CKS1YBR135W YDR524C-BQ3E6R4 66 aa3.8□□□□□ -1.8
CKS1YBR135W IZH4Q99393 312 aa3.8□□□□□ -1.8
CKS1YBR135W ATP6P00854 259 aa3.79□□□□□ -1.8
CKS1YBR135W SSA3P09435 649 aaKnown RBP3.79□□□□□ -1.8
CKS1YBR135W RPL31AP0C2H8 113 aaKnown RBP3.79□□□□□ -1.8
CKS1YBR135W FRS2P15625 503 aaKnown RBP3.79□□□□□ -1.8
CKS1YBR135W ERD1P16151 362 aa3.79□□□□□ -1.8
CKS1YBR135W CDC42P19073 191 aa3.79□□□□□ -1.8
CKS1YBR135W EPT1P22140 391 aa3.79□□□□□ -1.8
CKS1YBR135W CSM1P25651 190 aa3.79□□□□□ -1.8
CKS1YBR135W SPS19P32573 292 aaKnown RBP3.79□□□□□ -1.8
CKS1YBR135W COT1P32798 439 aa3.79□□□□□ -1.8
CKS1YBR135W RPT5P33297 434 aaKnown RBP3.79□□□□□ -1.8
CKS1YBR135W MSN4P33749 630 aa3.79□□□□□ -1.8
CKS1YBR135W YKL187CP34231 750 aa3.79□□□□□ -1.8
CKS1YBR135W MRP21P38175 177 aa3.79□□□□□ -1.8
CKS1YBR135W OPY1P38271 328 aa3.79□□□□□ -1.8
CKS1YBR135W SLX1P38324 304 aa3.79□□□□□ -1.8
CKS1YBR135W HMF1P40037 129 aaKnown RBP3.79□□□□□ -1.8
CKS1YBR135W AGP3P43548 558 aa3.79□□□□□ -1.8
CKS1YBR135W SDS23P53172 527 aa3.79□□□□□ -1.8
CKS1YBR135W SWC4P53201 476 aa3.79□□□□□ -1.8
CKS1YBR135W MIM1Q08176 113 aa3.79□□□□□ -1.8
CKS1YBR135W YDR018CQ12185 396 aa3.79□□□□□ -1.8
CKS1YBR135W MOT1P32333 1867 aa3.79□□□□□ -1.8
CKS1YBR135W KSS1P14681 368 aa3.78□□□□□ -1.8
CKS1YBR135W CYM1P32898 989 aa3.78□□□□□ -1.8
CKS1YBR135W BMH2P34730 273 aaKnown RBP3.78□□□□□ -1.8
CKS1YBR135W ECM4P36156 370 aa3.78□□□□□ -1.8
CKS1YBR135W TVP38P36164 337 aa3.78□□□□□ -1.8
CKS1YBR135W MRPL37P36532 105 aa3.78□□□□□ -1.8
CKS1YBR135W TAE1P38340 232 aa3.78□□□□□ -1.8
CKS1YBR135W HIS2P38635 335 aa3.78□□□□□ -1.8
CKS1YBR135W GDS1P41913 522 aa3.78□□□□□ -1.8
CKS1YBR135W UBC13P52490 153 aa3.78□□□□□ -1.8
CKS1YBR135W VEL1P53058 206 aa3.78□□□□□ -1.8
CKS1YBR135W EFM5P53200 248 aaKnown RBP3.78□□□□□ -1.8
CKS1YBR135W MPP6P53725 186 aaPredicted RBP3.78□□□□□ -1.8
CKS1YBR135W YNL247WP53852 767 aaKnown RBP3.78□□□□□ -1.8
CKS1YBR135W BER1Q06688 274 aaKnown RBP3.78□□□□□ -1.8
CKS1YBR135W MCH1Q07376 486 aa3.78□□□□□ -1.8
CKS1YBR135W PRP46Q12417 451 aaPredicted RBP3.78□□□□□ -1.8
CKS1YBR135W RAX2Q12465 1220 aa3.78□□□□□ -1.8
CKS1YBR135W TPI1P00942 248 aaKnown RBP3.77□□□□□ -1.81
CKS1YBR135W MATALPHA2P0CY08 210 aa3.77□□□□□ -1.81
CKS1YBR135W HMLALPHA2P0CY09 210 aa3.77□□□□□ -1.81
CKS1YBR135W MRPL20P22354 195 aaPredicted RBP3.77□□□□□ -1.81
CKS1YBR135W RPL16BP26785 198 aaKnown RBP3.77□□□□□ -1.81
CKS1YBR135W YPC1P38298 316 aa3.77□□□□□ -1.81
CKS1YBR135W TCD1P38756 429 aa3.77□□□□□ -1.81
CKS1YBR135W FMP33P46998 180 aa3.77□□□□□ -1.81
CKS1YBR135W YPL077CQ02831 240 aa3.77□□□□□ -1.81
CKS1YBR135W VHS1Q03785 461 aa3.77□□□□□ -1.81
CKS1YBR135W ATC1Q04005 294 aa3.77□□□□□ -1.81
CKS1YBR135W YLR446WQ06204 433 aa3.77□□□□□ -1.81
CKS1YBR135W YPL245WQ12179 454 aaKnown RBP3.77□□□□□ -1.81
CKS1YBR135W YOL085CQ99345 113 aa3.77□□□□□ -1.81
CKS1YBR135W BI3Q9ZZW7 517 aa3.77□□□□□ -1.81
CKS1YBR135W FKS1P38631 1876 aaKnown RBP3.77□□□□□ -1.81
CKS1YBR135W UBR2Q07963 1872 aa3.76□□□□□ -1.81
CKS1YBR135W ILV1P00927 576 aaKnown RBP3.76□□□□□ -1.81
CKS1YBR135W INO2P26798 304 aa3.76□□□□□ -1.81
CKS1YBR135W MGM101P32787 269 aaKnown RBP3.76□□□□□ -1.81
CKS1YBR135W TPO5P36029 618 aa3.76□□□□□ -1.81
CKS1YBR135W ECM34P38728 170 aa3.76□□□□□ -1.81
CKS1YBR135W SEO1P39709 593 aa3.76□□□□□ -1.81
CKS1YBR135W RRT13P40042 185 aa3.76□□□□□ -1.81
CKS1YBR135W BOP2Q06150 570 aa3.76□□□□□ -1.81
CKS1YBR135W TDH3P00359 332 aaKnown RBP RIP-Chip data3.75□□□□□ -1.81not detected
CKS1YBR135W SIP3P38717 1229 aa3.75□□□□□ -1.81
CKS1YBR135W GAA1P39012 614 aa3.75□□□□□ -1.81
CKS1YBR135W HIT1P46973 164 aa3.75□□□□□ -1.81
CKS1YBR135W MNT4P53745 580 aa3.75□□□□□ -1.81
CKS1YBR135W YNR066CP53752 436 aa3.75□□□□□ -1.81
CKS1YBR135W ASR1Q06834 288 aa3.75□□□□□ -1.81
CKS1YBR135W YOL029CQ08187 201 aa3.75□□□□□ -1.81
CKS1YBR135W RIF1P29539 1916 aa3.75□□□□□ -1.81
CKS1YBR135W RPL24AP04449 155 aaKnown RBP3.74□□□□□ -1.81
CKS1YBR135W ARG80P07249 177 aa3.74□□□□□ -1.81
CKS1YBR135W SRB4P32569 687 aa3.74□□□□□ -1.81
CKS1YBR135W SUA5P32579 426 aa3.74□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms