RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 SPATA32Q96LK8 384 aa13.76□□□□□ -0.21
CLN6-225ENST00000638144 ACO2Q99798 780 aaKnown RBP13.76□□□□□ -0.21
CLN6-225ENST00000638144 PLVAPQ9BX97 442 aa13.76□□□□□ -0.21
CLN6-225ENST00000638144 CDT1Q9H211 546 aa13.76□□□□□ -0.21
CLN6-225ENST00000638144 PARVGQ9HBI0 331 aa13.76□□□□□ -0.21
CLN6-225ENST00000638144 AAASQ9NRG9 546 aa13.76□□□□□ -0.21
CLN6-225ENST00000638144 TBC1D7Q9P0N9 293 aa13.76□□□□□ -0.21
CLN6-225ENST00000638144 ANKFY1Q9P2R3 1169 aa13.76□□□□□ -0.21
CLN6-225ENST00000638144 RCOR1Q9UKL0 485 aa13.76□□□□□ -0.21
CLN6-225ENST00000638144 CFAP45Q9UL16 551 aa13.76□□□□□ -0.21
CLN6-225ENST00000638144 ODF2LQ9ULJ1 636 aa13.76□□□□□ -0.21
CLN6-225ENST00000638144 SPTBN5Q9NRC6 3674 aaKnown RBP13.75□□□□□ -0.21
CLN6-225ENST00000638144 F8W810 466 aa13.75□□□□□ -0.21
CLN6-225ENST00000638144 IDEP14735 1019 aa13.75□□□□□ -0.21
CLN6-225ENST00000638144 CASP1P29466 404 aa13.75□□□□□ -0.21
CLN6-225ENST00000638144 GTF2F1P35269 517 aaKnown RBP eCLIP13.75□□□□□ -0.211e-6■■■■□ 26
CLN6-225ENST00000638144 SMTNP53814 917 aa13.75□□□□□ -0.21
CLN6-225ENST00000638144 NCKAP1LP55160 1127 aa13.75□□□□□ -0.21
CLN6-225ENST00000638144 TFF2Q03403 129 aa13.75□□□□□ -0.21
CLN6-225ENST00000638144 STRN3Q13033 797 aa13.75□□□□□ -0.21
CLN6-225ENST00000638144 PTPROQ16827 1216 aa13.75□□□□□ -0.21
CLN6-225ENST00000638144 ZNF568Q3ZCX4 644 aa13.75□□□□□ -0.21
CLN6-225ENST00000638144 SEZ6Q53EL9 994 aa13.75□□□□□ -0.21
CLN6-225ENST00000638144 RESP18Q5W5W9 173 aa13.75□□□□□ -0.21
CLN6-225ENST00000638144 ATL3Q6DD88 541 aa13.75□□□□□ -0.21
CLN6-225ENST00000638144 HAUS6Q7Z4H7 955 aa13.75□□□□□ -0.21
CLN6-225ENST00000638144 ADGRD2Q7Z7M1 963 aa13.75□□□□□ -0.21
CLN6-225ENST00000638144 SLC17A8Q8NDX2 589 aa13.75□□□□□ -0.21
CLN6-225ENST00000638144 CNNM3Q8NE01 707 aa13.75□□□□□ -0.21
CLN6-225ENST00000638144 RABGGTAQ92696 567 aa13.75□□□□□ -0.21
CLN6-225ENST00000638144 P2RX5Q93086 422 aa13.75□□□□□ -0.21
CLN6-225ENST00000638144 DNAJC19Q96DA6 116 aa13.75□□□□□ -0.21
CLN6-225ENST00000638144 BICD1Q96G01 975 aa13.75□□□□□ -0.21
CLN6-225ENST00000638144 FIZ1Q96SL8 496 aa13.75□□□□□ -0.21
CLN6-225ENST00000638144 ADPGKQ9BRR6 497 aa13.75□□□□□ -0.21
CLN6-225ENST00000638144 MRPL4Q9BYD3 311 aaKnown RBP13.75□□□□□ -0.21
CLN6-225ENST00000638144 FGFBP2Q9BYJ0 223 aa13.75□□□□□ -0.21
CLN6-225ENST00000638144 IKZF4Q9H2S9 585 aa13.75□□□□□ -0.21
CLN6-225ENST00000638144 TMEM134Q9H6X4 195 aa13.75□□□□□ -0.21
CLN6-225ENST00000638144 C17orf75Q9HAS0 396 aa13.75□□□□□ -0.21
CLN6-225ENST00000638144 LARSQ9P2J5 1176 aaKnown RBP13.75□□□□□ -0.21
CLN6-225ENST00000638144 PRG3Q9Y2Y8 225 aaPredicted RBP13.75□□□□□ -0.21
CLN6-225ENST00000638144 TTC28Q96AY4 2481 aa13.75□□□□□ -0.21
CLN6-225ENST00000638144 CITO14578 2027 aa13.74□□□□□ -0.21
CLN6-225ENST00000638144 ABLIM1O14639 778 aa13.74□□□□□ -0.21
CLN6-225ENST00000638144 POLR2DO15514 142 aaKnown RBP13.74□□□□□ -0.21
CLN6-225ENST00000638144 TRAK2O60296 914 aa13.74□□□□□ -0.21
CLN6-225ENST00000638144 DCAF4L1Q3SXM0 396 aa13.74□□□□□ -0.21
CLN6-225ENST00000638144 TIGD5Q53EQ6 642 aa13.74□□□□□ -0.21
CLN6-225ENST00000638144 ZC2HC1CQ53FD0 456 aaPredicted RBP13.74□□□□□ -0.21
CLN6-225ENST00000638144 GLRA4Q5JXX5 417 aa13.74□□□□□ -0.21
CLN6-225ENST00000638144 PLPP4Q5VZY2 271 aa13.74□□□□□ -0.21
CLN6-225ENST00000638144 EP400NLQ6ZTU2 488 aa13.74□□□□□ -0.21
CLN6-225ENST00000638144 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.74□□□□□ -0.21
CLN6-225ENST00000638144 FAM178BQ8IXR5 827 aa13.74□□□□□ -0.21
CLN6-225ENST00000638144 GRAMD1CQ8IYS0 662 aa13.74□□□□□ -0.21
CLN6-225ENST00000638144 HACE1Q8IYU2 909 aa13.74□□□□□ -0.21
CLN6-225ENST00000638144 SLC39A11Q8N1S5 342 aa13.74□□□□□ -0.21
CLN6-225ENST00000638144 GSTCDQ8NEC7 633 aa13.74□□□□□ -0.21
CLN6-225ENST00000638144 FAM193BQ96PV7 902 aaPredicted RBP13.74□□□□□ -0.21
CLN6-225ENST00000638144 TCHPQ9BT92 498 aa13.74□□□□□ -0.21
CLN6-225ENST00000638144 SPG21Q9NZD8 308 aa13.74□□□□□ -0.21
CLN6-225ENST00000638144 LMCD1Q9NZU5 365 aa13.74□□□□□ -0.21
CLN6-225ENST00000638144 TNFSF13BQ9Y275 285 aa13.74□□□□□ -0.21
CLN6-225ENST00000638144 RBM19Q9Y4C8 960 aaKnown RBP13.74□□□□□ -0.21
CLN6-225ENST00000638144 A0A1B0GVL5 298 aa13.73□□□□□ -0.21
CLN6-225ENST00000638144 TISP43B9A030 160 aa13.73□□□□□ -0.21
CLN6-225ENST00000638144 GALTP07902 379 aa13.73□□□□□ -0.21
CLN6-225ENST00000638144 MATR3P43243 847 aaKnown RBP eCLIP13.73□□□□□ -0.21
CLN6-225ENST00000638144 ALDH7A1P49419 539 aaKnown RBP13.73□□□□□ -0.21
CLN6-225ENST00000638144 ERVFC1P60507 584 aa13.73□□□□□ -0.21
CLN6-225ENST00000638144 RBM23Q86U06 439 aaKnown RBP13.73□□□□□ -0.21
CLN6-225ENST00000638144 MICAL1Q8TDZ2 1067 aa13.73□□□□□ -0.21
CLN6-225ENST00000638144 AUTS2Q8WXX7 1259 aa13.73□□□□□ -0.21
CLN6-225ENST00000638144 HPS3Q969F9 1004 aa13.73□□□□□ -0.21
CLN6-225ENST00000638144 RPS6KC1Q96S38 1066 aa13.73□□□□□ -0.21
CLN6-225ENST00000638144 NTPCRQ9BSD7 190 aaKnown RBP13.73□□□□□ -0.21
CLN6-225ENST00000638144 VN1R3Q9BXE9 311 aa13.73□□□□□ -0.21
CLN6-225ENST00000638144 HAPLN2Q9GZV7 340 aa13.73□□□□□ -0.21
CLN6-225ENST00000638144 NSUN3Q9H649 340 aaKnown RBP13.73□□□□□ -0.21
CLN6-225ENST00000638144 IGFLR1Q9H665 355 aa13.73□□□□□ -0.21
CLN6-225ENST00000638144 PTPRHQ9HD43 1115 aa13.73□□□□□ -0.21
CLN6-225ENST00000638144 TLR9Q9NR96 1032 aa13.73□□□□□ -0.21
CLN6-225ENST00000638144 FAM13BQ9NYF5 915 aa13.73□□□□□ -0.21
CLN6-225ENST00000638144 TBX20Q9UMR3 447 aa13.73□□□□□ -0.21
CLN6-225ENST00000638144 GIT1Q9Y2X7 761 aa13.73□□□□□ -0.21
CLN6-225ENST00000638144 VCANP13611 3396 aa13.72□□□□□ -0.21
CLN6-225ENST00000638144 PTGESO14684 152 aa13.72□□□□□ -0.21
CLN6-225ENST00000638144 HNRNPDLO14979 420 aaKnown RBP13.72□□□□□ -0.21
CLN6-225ENST00000638144 PFKFB1P16118 471 aa13.72□□□□□ -0.21
CLN6-225ENST00000638144 PROZP22891 400 aa13.72□□□□□ -0.21
CLN6-225ENST00000638144 CA8P35219 290 aa13.72□□□□□ -0.21
CLN6-225ENST00000638144 PPM1AP35813 382 aa13.72□□□□□ -0.21
CLN6-225ENST00000638144 AFMP43652 599 aa13.72□□□□□ -0.21
CLN6-225ENST00000638144 OR1G1P47890 313 aa13.72□□□□□ -0.21
CLN6-225ENST00000638144 CASP5P51878 434 aa13.72□□□□□ -0.21
CLN6-225ENST00000638144 NOLC1Q14978 699 aaKnown RBP eCLIP13.72□□□□□ -0.21
CLN6-225ENST00000638144 MPZL3Q6UWV2 235 aa13.72□□□□□ -0.21
CLN6-225ENST00000638144 COLGALT2Q8IYK4 626 aa13.72□□□□□ -0.21
CLN6-225ENST00000638144 TMEM130Q8N3G9 435 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms