RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 IBSPP21815 317 aaPredicted RBP17.5■□□□□ 0.39
CLN6-216ENST00000636876 MATR3P43243 847 aaKnown RBP eCLIP17.5■□□□□ 0.39
CLN6-216ENST00000636876 SLFN12LQ6IEE8 588 aa17.5■□□□□ 0.39
CLN6-216ENST00000636876 MRPL10Q7Z7H8 261 aaKnown RBP17.5■□□□□ 0.39
CLN6-216ENST00000636876 ZBTB33Q86T24 672 aa17.5■□□□□ 0.39
CLN6-216ENST00000636876 CRIPAKQ8N1N5 446 aa17.5■□□□□ 0.39
CLN6-216ENST00000636876 SMG8Q8ND04 991 aaKnown RBP17.5■□□□□ 0.39
CLN6-216ENST00000636876 SLC9A7Q96T83 725 aa17.5■□□□□ 0.39
CLN6-216ENST00000636876 HAPLN2Q9GZV7 340 aa17.5■□□□□ 0.39
CLN6-216ENST00000636876 KCTD10Q9H3F6 313 aa17.5■□□□□ 0.39
CLN6-216ENST00000636876 TMEM161AQ9NX61 479 aa17.5■□□□□ 0.39
CLN6-216ENST00000636876 MAPK8IP1Q9UQF2 711 aa17.5■□□□□ 0.39
CLN6-216ENST00000636876 IPPQ9Y573 584 aa17.5■□□□□ 0.39
CLN6-216ENST00000636876 PTPRSQ13332 1948 aa17.49■□□□□ 0.39
CLN6-216ENST00000636876 TGFB1I1O43294 461 aa17.49■□□□□ 0.39
CLN6-216ENST00000636876 EOMESO95936 686 aa17.49■□□□□ 0.39
CLN6-216ENST00000636876 STAG3L1P0CL83 205 aa17.49■□□□□ 0.39
CLN6-216ENST00000636876 HARSP12081 509 aaKnown RBP17.49■□□□□ 0.39
CLN6-216ENST00000636876 ATP2A2P16615 1042 aaKnown RBP17.49■□□□□ 0.39
CLN6-216ENST00000636876 ADSSP30520 456 aa17.49■□□□□ 0.39
CLN6-216ENST00000636876 PRCPP42785 496 aa17.49■□□□□ 0.39
CLN6-216ENST00000636876 SNRPFP62306 86 aaKnown RBP17.49■□□□□ 0.39
CLN6-216ENST00000636876 HS2ST1Q7LGA3 356 aa17.49■□□□□ 0.39
CLN6-216ENST00000636876 TDHQ8IZJ6 230 aa17.49■□□□□ 0.39
CLN6-216ENST00000636876 ADSSL1Q8N142 457 aa17.49■□□□□ 0.39
CLN6-216ENST00000636876 RNF169Q8NCN4 708 aa17.49■□□□□ 0.39
CLN6-216ENST00000636876 PHOSPHO2Q8TCD6 241 aa17.49■□□□□ 0.39
CLN6-216ENST00000636876 TOP1MTQ969P6 601 aa17.49■□□□□ 0.39
CLN6-216ENST00000636876 PGBD4Q96DM1 585 aa17.49■□□□□ 0.39
CLN6-216ENST00000636876 NXF3Q9H4D5 531 aaKnown RBP17.49■□□□□ 0.39
CLN6-216ENST00000636876 LRFN2Q9ULH4 789 aa17.49■□□□□ 0.39
CLN6-216ENST00000636876 PCDHB7Q9Y5E2 793 aa17.49■□□□□ 0.39
CLN6-216ENST00000636876 A0A1W2PPC1 479 aa17.48■□□□□ 0.39
CLN6-216ENST00000636876 OGTO15294 1046 aa17.48■□□□□ 0.39
CLN6-216ENST00000636876 UPP2O95045 317 aa17.48■□□□□ 0.39
CLN6-216ENST00000636876 GARTP22102 1010 aa17.48■□□□□ 0.39
CLN6-216ENST00000636876 PPP1R2P41236 205 aa17.48■□□□□ 0.39
CLN6-216ENST00000636876 GRM5P41594 1212 aa17.48■□□□□ 0.39
CLN6-216ENST00000636876 STIM1Q13586 685 aa17.48■□□□□ 0.39
CLN6-216ENST00000636876 HACE1Q8IYU2 909 aa17.48■□□□□ 0.39
CLN6-216ENST00000636876 GOLGA5Q8TBA6 731 aa17.48■□□□□ 0.39
CLN6-216ENST00000636876 POMGNT1Q8WZA1 660 aa17.48■□□□□ 0.39
CLN6-216ENST00000636876 LPPQ93052 612 aa17.48■□□□□ 0.39
CLN6-216ENST00000636876 LRCH3Q96II8 777 aa17.48■□□□□ 0.39
CLN6-216ENST00000636876 MSTO1Q9BUK6 570 aa17.48■□□□□ 0.39
CLN6-216ENST00000636876 AGPAT3Q9NRZ7 376 aa17.48■□□□□ 0.39
CLN6-216ENST00000636876 TYW1Q9NV66 732 aaKnown RBP17.48■□□□□ 0.39
CLN6-216ENST00000636876 CGNQ9P2M7 1197 aaKnown RBP17.48■□□□□ 0.39
CLN6-216ENST00000636876 HES2Q9Y543 173 aa17.48■□□□□ 0.39
CLN6-216ENST00000636876 COL6A3P12111 3177 aa17.48■□□□□ 0.39
CLN6-216ENST00000636876 PPP1R3GB7ZBB8 358 aa17.47■□□□□ 0.39
CLN6-216ENST00000636876 PDXKO00764 312 aa17.47■□□□□ 0.39
CLN6-216ENST00000636876 ITGA4P13612 1032 aa17.47■□□□□ 0.39
CLN6-216ENST00000636876 CD44P16070 742 aaKnown RBP17.47■□□□□ 0.39
CLN6-216ENST00000636876 ARMCX5Q6P1M9 558 aa17.47■□□□□ 0.39
CLN6-216ENST00000636876 AGMOQ6ZNB7 445 aa17.47■□□□□ 0.39
CLN6-216ENST00000636876 TMCO2Q7Z6W1 182 aaPredicted RBP17.47■□□□□ 0.39
CLN6-216ENST00000636876 HERC6Q8IVU3 1022 aa17.47■□□□□ 0.39
CLN6-216ENST00000636876 THNSL1Q8IYQ7 743 aa17.47■□□□□ 0.39
CLN6-216ENST00000636876 CEP120Q8N960 986 aa17.47■□□□□ 0.39
CLN6-216ENST00000636876 CBWD1Q9BRT8 395 aa17.47■□□□□ 0.39
CLN6-216ENST00000636876 APOL6Q9BWW8 343 aa17.47■□□□□ 0.39
CLN6-216ENST00000636876 RNF39Q9H2S5 420 aa17.47■□□□□ 0.39
CLN6-216ENST00000636876 RNF19AQ9NV58 838 aa17.47■□□□□ 0.39
CLN6-216ENST00000636876 AGO2Q9UKV8 859 aaKnown RBP17.47■□□□□ 0.39
CLN6-216ENST00000636876 MEIS3P2A8K0S8 358 aa17.46■□□□□ 0.39
CLN6-216ENST00000636876 PSMA7O14818 248 aa17.46■□□□□ 0.39
CLN6-216ENST00000636876 HOXA2O43364 376 aa17.46■□□□□ 0.39
CLN6-216ENST00000636876 FAM189A1O60320 539 aa17.46■□□□□ 0.39
CLN6-216ENST00000636876 GJB5O95377 273 aa17.46■□□□□ 0.39
CLN6-216ENST00000636876 NLRP12P59046 1061 aa17.46■□□□□ 0.39
CLN6-216ENST00000636876 KYAT1Q16773 422 aa17.46■□□□□ 0.39
CLN6-216ENST00000636876 ZCWPW2Q504Y3 356 aa17.46■□□□□ 0.39
CLN6-216ENST00000636876 CENPPQ6IPU0 288 aa17.46■□□□□ 0.39
CLN6-216ENST00000636876 FAM117BQ6P1L5 589 aa17.46■□□□□ 0.39
CLN6-216ENST00000636876 C12orf56Q8IXR9 622 aa17.46■□□□□ 0.39
CLN6-216ENST00000636876 MLKLQ8NB16 471 aa17.46■□□□□ 0.39
CLN6-216ENST00000636876 DHTKD1Q96HY7 919 aaPredicted RBP17.46■□□□□ 0.39
CLN6-216ENST00000636876 CCDC94Q9BW85 323 aaPredicted RBP17.46■□□□□ 0.39
CLN6-216ENST00000636876 SEMA6BQ9H3T3 888 aa17.46■□□□□ 0.39
CLN6-216ENST00000636876 UBN1Q9NPG3 1134 aa17.46■□□□□ 0.39
CLN6-216ENST00000636876 SNTG2Q9NY99 539 aa17.46■□□□□ 0.39
CLN6-216ENST00000636876 TRAF3IP3Q9Y228 551 aa17.46■□□□□ 0.39
CLN6-216ENST00000636876 KIAA0391O15091 583 aaKnown RBP17.45■□□□□ 0.38
CLN6-216ENST00000636876 CLIC2O15247 247 aa17.45■□□□□ 0.38
CLN6-216ENST00000636876 CALUO43852 315 aaPredicted RBP17.45■□□□□ 0.38
CLN6-216ENST00000636876 RECQL4O94761 1208 aa17.45■□□□□ 0.38
CLN6-216ENST00000636876 CLTAP09496 248 aa17.45■□□□□ 0.38
CLN6-216ENST00000636876 FGFR1P11362 822 aa17.45■□□□□ 0.38
CLN6-216ENST00000636876 AKAP5P24588 427 aa17.45■□□□□ 0.38
CLN6-216ENST00000636876 OSTNP61366 133 aa17.45■□□□□ 0.38
CLN6-216ENST00000636876 SEZ6Q53EL9 994 aa17.45■□□□□ 0.38
CLN6-216ENST00000636876 CLLU1OSQ5K130 101 aa17.45■□□□□ 0.38
CLN6-216ENST00000636876 ZBTB41Q5SVQ8 909 aa17.45■□□□□ 0.38
CLN6-216ENST00000636876 FAM109BQ6ICB4 259 aaPredicted RBP17.45■□□□□ 0.38
CLN6-216ENST00000636876 KLHL10Q6JEL2 608 aa17.45■□□□□ 0.38
CLN6-216ENST00000636876 TMEM192Q8IY95 271 aa17.45■□□□□ 0.38
CLN6-216ENST00000636876 ZBED2Q9BTP6 218 aa17.45■□□□□ 0.38
CLN6-216ENST00000636876 PCIF1Q9H4Z3 704 aa17.45■□□□□ 0.38
CLN6-216ENST00000636876 RSAD1Q9HA92 442 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms