RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 IGBP1P78318 339 aa12.81□□□□□ -0.36
LINC00963-220ENST00000625171 IRX5P78411 483 aaPredicted RBP12.81□□□□□ -0.36
LINC00963-220ENST00000625171 CDK17Q00537 523 aa12.81□□□□□ -0.36
LINC00963-220ENST00000625171 HIC1Q14526 733 aa12.81□□□□□ -0.36
LINC00963-220ENST00000625171 SYCP1Q15431 976 aa12.81□□□□□ -0.36
LINC00963-220ENST00000625171 SURF1Q15526 300 aa12.81□□□□□ -0.36
LINC00963-220ENST00000625171 NBPF20Q3BBV1 942 aa12.81□□□□□ -0.36
LINC00963-220ENST00000625171 DPY19L2P1Q6NXN4 242 aa12.81□□□□□ -0.36
LINC00963-220ENST00000625171 SERINC5Q86VE9 423 aa12.81□□□□□ -0.36
LINC00963-220ENST00000625171 ZSCAN30Q86W11 494 aa12.81□□□□□ -0.36
LINC00963-220ENST00000625171 CREBRFQ8IUR6 639 aa12.81□□□□□ -0.36
LINC00963-220ENST00000625171 FDXACB1Q9BRP7 624 aaPredicted RBP12.81□□□□□ -0.36
LINC00963-220ENST00000625171 TARS2Q9BW92 718 aaKnown RBP12.81□□□□□ -0.36
LINC00963-220ENST00000625171 GCOM2Q9BZD3 368 aaPredicted RBP12.81□□□□□ -0.36
LINC00963-220ENST00000625171 AGO2Q9UKV8 859 aaKnown RBP12.81□□□□□ -0.36
LINC00963-220ENST00000625171 AKT3Q9Y243 479 aa12.81□□□□□ -0.36
LINC00963-220ENST00000625171 CNTNAP2Q9UHC6 1331 aa12.81□□□□□ -0.36
LINC00963-220ENST00000625171 A0A0C4DFX4 3053 aa12.8□□□□□ -0.36
LINC00963-220ENST00000625171 KAT6AQ92794 2004 aa12.8□□□□□ -0.36
LINC00963-220ENST00000625171 TISP43B9A030 160 aa12.8□□□□□ -0.36
LINC00963-220ENST00000625171 OGTO15294 1046 aa12.8□□□□□ -0.36
LINC00963-220ENST00000625171 NRDCO43847 1150 aa12.8□□□□□ -0.36
LINC00963-220ENST00000625171 MFAP3LO75121 409 aa12.8□□□□□ -0.36
LINC00963-220ENST00000625171 CAND2O75155 1236 aa12.8□□□□□ -0.36
LINC00963-220ENST00000625171 DARSP14868 501 aaKnown RBP12.8□□□□□ -0.36
LINC00963-220ENST00000625171 FMO5P49326 533 aa12.8□□□□□ -0.36
LINC00963-220ENST00000625171 ACLYP53396 1101 aa12.8□□□□□ -0.36
LINC00963-220ENST00000625171 CRYBB1P53674 252 aaPredicted RBP12.8□□□□□ -0.36
LINC00963-220ENST00000625171 AP3M2P53677 418 aa12.8□□□□□ -0.36
LINC00963-220ENST00000625171 NLRP11P59045 1033 aaKnown RBP12.8□□□□□ -0.36
LINC00963-220ENST00000625171 ZBED6P86452 979 aa12.8□□□□□ -0.36
LINC00963-220ENST00000625171 CYP24A1Q07973 514 aa12.8□□□□□ -0.36
LINC00963-220ENST00000625171 RBL2Q08999 1139 aa12.8□□□□□ -0.36
LINC00963-220ENST00000625171 PRPF4BQ13523 1007 aaKnown RBP12.8□□□□□ -0.36
LINC00963-220ENST00000625171 PSMD6Q15008 389 aa12.8□□□□□ -0.36
LINC00963-220ENST00000625171 C1orf220Q5T0J3 134 aa12.8□□□□□ -0.36
LINC00963-220ENST00000625171 MPZL3Q6UWV2 235 aa12.8□□□□□ -0.36
LINC00963-220ENST00000625171 CXCL17Q6UXB2 119 aa12.8□□□□□ -0.36
LINC00963-220ENST00000625171 CRELD2Q6UXH1 353 aaPredicted RBP12.8□□□□□ -0.36
LINC00963-220ENST00000625171 GBP6Q6ZN66 633 aa12.8□□□□□ -0.36
LINC00963-220ENST00000625171 OR8K1Q8NGG5 319 aa12.8□□□□□ -0.36
LINC00963-220ENST00000625171 U2AF1L4Q8WU68 220 aaKnown RBP12.8□□□□□ -0.36
LINC00963-220ENST00000625171 SYN2Q92777 582 aaPredicted RBP12.8□□□□□ -0.36
LINC00963-220ENST00000625171 VTI1AQ96AJ9 217 aa12.8□□□□□ -0.36
LINC00963-220ENST00000625171 BICD1Q96G01 975 aa12.8□□□□□ -0.36
LINC00963-220ENST00000625171 NLRP4Q96MN2 994 aa12.8□□□□□ -0.36
LINC00963-220ENST00000625171 DNAJC7Q99615 494 aa12.8□□□□□ -0.36
LINC00963-220ENST00000625171 RNF208Q9H0X6 261 aa12.8□□□□□ -0.36
LINC00963-220ENST00000625171 PCIF1Q9H4Z3 704 aa12.8□□□□□ -0.36
LINC00963-220ENST00000625171 MINDY3Q9H8M7 445 aa12.8□□□□□ -0.36
LINC00963-220ENST00000625171 PAK6Q9NQU5 681 aaPredicted RBP12.8□□□□□ -0.36
LINC00963-220ENST00000625171 LUC7L2Q9Y383 392 aaKnown RBP12.8□□□□□ -0.36
LINC00963-220ENST00000625171 SQORQ9Y6N5 450 aa12.8□□□□□ -0.36
LINC00963-220ENST00000625171 COL6A3P12111 3177 aa12.79□□□□□ -0.36
LINC00963-220ENST00000625171 TTC26A0AVF1 554 aa12.79□□□□□ -0.36
LINC00963-220ENST00000625171 INO80B-WBP1J3KQ70 363 aa12.79□□□□□ -0.36
LINC00963-220ENST00000625171 TREHO43280 583 aa12.79□□□□□ -0.36
LINC00963-220ENST00000625171 VTNP04004 478 aa12.79□□□□□ -0.36
LINC00963-220ENST00000625171 EDN1P05305 212 aa12.79□□□□□ -0.36
LINC00963-220ENST00000625171 IQCF3P0C7M6 154 aa12.79□□□□□ -0.36
LINC00963-220ENST00000625171 MCF2P10911 925 aa12.79□□□□□ -0.36
LINC00963-220ENST00000625171 RFX1P22670 979 aa12.79□□□□□ -0.36
LINC00963-220ENST00000625171 EIF4BP23588 611 aaKnown RBP12.79□□□□□ -0.36
LINC00963-220ENST00000625171 CASP14P31944 242 aa12.79□□□□□ -0.36
LINC00963-220ENST00000625171 NCBP1Q09161 790 aaKnown RBP12.79□□□□□ -0.36
LINC00963-220ENST00000625171 CETN1Q12798 172 aa12.79□□□□□ -0.36
LINC00963-220ENST00000625171 EXOC3L4Q17RC7 722 aa12.79□□□□□ -0.36
LINC00963-220ENST00000625171 ATF7IP2Q5U623 682 aa12.79□□□□□ -0.36
LINC00963-220ENST00000625171 C15orf39Q6ZRI6 1047 aa12.79□□□□□ -0.36
LINC00963-220ENST00000625171 APBB1IPQ7Z5R6 666 aaPredicted RBP12.79□□□□□ -0.36
LINC00963-220ENST00000625171 RSPH3Q86UC2 560 aa12.79□□□□□ -0.36
LINC00963-220ENST00000625171 CBWD2Q8IUF1 395 aa12.79□□□□□ -0.36
LINC00963-220ENST00000625171 FMNL3Q8IVF7 1028 aa12.79□□□□□ -0.36
LINC00963-220ENST00000625171 ZNF397Q8NF99 534 aaPredicted RBP12.79□□□□□ -0.36
LINC00963-220ENST00000625171 LMO3Q8TAP4 145 aa12.79□□□□□ -0.36
LINC00963-220ENST00000625171 TSPAN18Q96SJ8 248 aa12.79□□□□□ -0.36
LINC00963-220ENST00000625171 HAPLN2Q9GZV7 340 aa12.79□□□□□ -0.36
LINC00963-220ENST00000625171 KCNF1Q9H3M0 494 aa12.79□□□□□ -0.36
LINC00963-220ENST00000625171 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.79□□□□□ -0.36
LINC00963-220ENST00000625171 CPSF3Q9UKF6 684 aaKnown RBP12.79□□□□□ -0.36
LINC00963-220ENST00000625171 PLAGL2Q9UPG8 496 aa12.79□□□□□ -0.36
LINC00963-220ENST00000625171 PHF24Q9UPV7 400 aa12.79□□□□□ -0.36
LINC00963-220ENST00000625171 GRIN2DO15399 1336 aa12.79□□□□□ -0.36
LINC00963-220ENST00000625171 EVPLQ92817 2033 aa12.78□□□□□ -0.36
LINC00963-220ENST00000625171 NOL4O94818 638 aa12.78□□□□□ -0.36
LINC00963-220ENST00000625171 SGPL1O95470 568 aa12.78□□□□□ -0.36
LINC00963-220ENST00000625171 TRIM21P19474 475 aaKnown RBP12.78□□□□□ -0.36
LINC00963-220ENST00000625171 PON1P27169 355 aa12.78□□□□□ -0.36
LINC00963-220ENST00000625171 MNX1P50219 401 aaPredicted RBP12.78□□□□□ -0.36
LINC00963-220ENST00000625171 CCZ1BP86790 482 aa12.78□□□□□ -0.36
LINC00963-220ENST00000625171 CCZ1P86791 482 aaPredicted RBP12.78□□□□□ -0.36
LINC00963-220ENST00000625171 PTK7Q13308 1070 aa12.78□□□□□ -0.36
LINC00963-220ENST00000625171 MEA1Q16626 185 aa12.78□□□□□ -0.36
LINC00963-220ENST00000625171 FAM26DQ5JW98 314 aa12.78□□□□□ -0.36
LINC00963-220ENST00000625171 KRT39Q6A163 491 aa12.78□□□□□ -0.36
LINC00963-220ENST00000625171 GPR153Q6NV75 609 aa12.78□□□□□ -0.36
LINC00963-220ENST00000625171 TMEM139Q8IV31 216 aa12.78□□□□□ -0.36
LINC00963-220ENST00000625171 BRSK2Q8IWQ3 736 aa12.78□□□□□ -0.36
LINC00963-220ENST00000625171 EHBP1Q8NDI1 1231 aa12.78□□□□□ -0.36
LINC00963-220ENST00000625171 NEK11Q8NG66 645 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms