RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 USP11P51784 963 aa13.05□□□□□ -0.32
MATR3-227ENST00000618441 MAN2A1Q16706 1144 aa13.05□□□□□ -0.32
MATR3-227ENST00000618441 TREML1Q86YW5 311 aa13.05□□□□□ -0.32
MATR3-227ENST00000618441 SLC7A5P1Q8MH63 180 aa13.05□□□□□ -0.32
MATR3-227ENST00000618441 IGDCC4Q8TDY8 1250 aa13.05□□□□□ -0.32
MATR3-227ENST00000618441 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.05□□□□□ -0.325e-10■■■■■ 83.5
MATR3-227ENST00000618441 SPZ1Q9BXG8 430 aa13.05□□□□□ -0.32
MATR3-227ENST00000618441 SLC7A5P2Q9GIP4 190 aa13.05□□□□□ -0.32
MATR3-227ENST00000618441 HEMK1Q9Y5R4 338 aaPredicted RBP13.05□□□□□ -0.32
MATR3-227ENST00000618441 NALCNQ8IZF0 1738 aa13.05□□□□□ -0.32
MATR3-227ENST00000618441 ACTN1P12814 892 aa13.05□□□□□ -0.32
MATR3-227ENST00000618441 CA4P22748 312 aa13.05□□□□□ -0.32
MATR3-227ENST00000618441 PTPN4P29074 926 aa13.05□□□□□ -0.32
MATR3-227ENST00000618441 MIIPQ5JXC2 388 aa13.05□□□□□ -0.32
MATR3-227ENST00000618441 DPY19L2Q6NUT2 758 aa13.05□□□□□ -0.32
MATR3-227ENST00000618441 ARHGAP27Q6ZUM4 889 aa13.05□□□□□ -0.32
MATR3-227ENST00000618441 NLRP9Q7RTR0 991 aa13.05□□□□□ -0.32
MATR3-227ENST00000618441 TSG101Q99816 390 aa13.05□□□□□ -0.32
MATR3-227ENST00000618441 EBF3Q9H4W6 596 aa13.05□□□□□ -0.32
MATR3-227ENST00000618441 EFR3BQ9Y2G0 817 aa13.05□□□□□ -0.32
MATR3-227ENST00000618441 KRT38O76015 456 aa13.05□□□□□ -0.32
MATR3-227ENST00000618441 AMPD1P23109 780 aa13.05□□□□□ -0.32
MATR3-227ENST00000618441 EIF2B2P49770 351 aaKnown RBP13.05□□□□□ -0.32
MATR3-227ENST00000618441 ARFIP2P53365 341 aa13.05□□□□□ -0.32
MATR3-227ENST00000618441 KDSRQ06136 332 aa13.05□□□□□ -0.32
MATR3-227ENST00000618441 PABPC4Q13310 644 aaKnown RBP eCLIP13.05□□□□□ -0.321e-13■■■■■ 30.6
MATR3-227ENST00000618441 BTN2A1Q7KYR7 527 aa13.05□□□□□ -0.32
MATR3-227ENST00000618441 RNF169Q8NCN4 708 aa13.05□□□□□ -0.32
MATR3-227ENST00000618441 SCFD2Q8WU76 684 aa13.05□□□□□ -0.32
MATR3-227ENST00000618441 DHTKD1Q96HY7 919 aaPredicted RBP13.05□□□□□ -0.32
MATR3-227ENST00000618441 THTPAQ9BU02 230 aa13.05□□□□□ -0.32
MATR3-227ENST00000618441 SLITRK6Q9H5Y7 841 aa13.05□□□□□ -0.32
MATR3-227ENST00000618441 SYNCQ9H7C4 482 aa13.05□□□□□ -0.32
MATR3-227ENST00000618441 LIN28AQ9H9Z2 209 aaKnown RBP13.05□□□□□ -0.32
MATR3-227ENST00000618441 DISC1Q9NRI5 854 aa13.05□□□□□ -0.32
MATR3-227ENST00000618441 ARMCX1Q9P291 453 aa13.05□□□□□ -0.32
MATR3-227ENST00000618441 APPL1Q9UKG1 709 aa13.05□□□□□ -0.32
MATR3-227ENST00000618441 DLG5Q8TDM6 1919 aa13.05□□□□□ -0.32
MATR3-227ENST00000618441 RNASEH1O60930 286 aaKnown RBP13.04□□□□□ -0.32
MATR3-227ENST00000618441 GJB6O95452 261 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 ATP5DP30049 168 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 SERPINB8P50452 374 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 ATP1A4Q13733 1029 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 PARP6Q2NL67 630 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 DCAF17Q5H9S7 520 aaPredicted RBP13.04□□□□□ -0.32
MATR3-227ENST00000618441 FAAH2Q6GMR7 532 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 THOC7Q6I9Y2 204 aaKnown RBP13.04□□□□□ -0.32
MATR3-227ENST00000618441 PRUNE1Q86TP1 453 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 GIPC3Q8TF64 312 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 CKAP2Q8WWK9 683 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 CLIP3Q96DZ5 547 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 CLPTM1LQ96KA5 538 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 PWWP2AQ96N64 755 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 ERGIC2Q96RQ1 377 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 KLHL4Q9C0H6 718 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 UTP6Q9NYH9 597 aaKnown RBP13.04□□□□□ -0.32
MATR3-227ENST00000618441 MEGF6O75095 1541 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 TNS3Q68CZ2 1445 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 KCNQ2O43526 872 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 H2AFZP0C0S5 128 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 MPP2Q14168 576 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 SLC18A3Q16572 532 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 C1orf228Q6PIY5 440 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 PPP4R3CPQ6ZMV5 832 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 H2AFVQ71UI9 128 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 SNX32Q86XE0 403 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 PIGBQ92521 554 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 PPCSQ9HAB8 311 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 TMEM98Q9Y2Y6 226 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 ATP6V0A2Q9Y487 856 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 DDX3XO00571 662 aaKnown RBP eCLIP13.04□□□□□ -0.322e-7■■■■■ 35.1
MATR3-227ENST00000618441 PRKAB2O43741 272 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 RXRGP48443 463 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 EPHB1P54762 984 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 SYT2Q8N9I0 419 aaPredicted RBP13.04□□□□□ -0.32
MATR3-227ENST00000618441 GATA6Q92908 595 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 C9orf72Q96LT7 481 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 CADM1Q9BY67 442 aaKnown RBP13.04□□□□□ -0.32
MATR3-227ENST00000618441 MYOCOSA0A1B0GUC4 107 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 GSTT2P0CG29 244 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 GSTT2BP0CG30 244 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 FOXN2P32314 431 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 PIK3CAP42336 1068 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 HALP42357 657 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 HIRAP54198 1017 aaPredicted RBP13.04□□□□□ -0.32
MATR3-227ENST00000618441 VPS36Q86VN1 386 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 SLC26A7Q8TE54 656 aa13.04□□□□□ -0.32
MATR3-227ENST00000618441 CPDO75976 1380 aa13.03□□□□□ -0.32
MATR3-227ENST00000618441 LINC00854A0A1B0GVQ3 168 aa13.03□□□□□ -0.32
MATR3-227ENST00000618441 H3BRJ5 948 aa13.03□□□□□ -0.32
MATR3-227ENST00000618441 RFC1P35251 1148 aaPredicted RBP13.03□□□□□ -0.32
MATR3-227ENST00000618441 CYTH1Q15438 398 aa13.03□□□□□ -0.32
MATR3-227ENST00000618441 ZYXQ15942 572 aaKnown RBP13.03□□□□□ -0.32
MATR3-227ENST00000618441 SYDE2Q5VT97 1194 aa13.03□□□□□ -0.32
MATR3-227ENST00000618441 MON2Q7Z3U7 1717 aa13.03□□□□□ -0.32
MATR3-227ENST00000618441 PATL1Q86TB9 770 aaKnown RBP13.03□□□□□ -0.32
MATR3-227ENST00000618441 NBPF15Q8N660 670 aa13.03□□□□□ -0.32
MATR3-227ENST00000618441 DDX12PQ92771 950 aa13.03□□□□□ -0.32
MATR3-227ENST00000618441 GPKOWQ92917 476 aaPredicted RBP eCLIP13.03□□□□□ -0.325e-8■■□□□ 12.1
MATR3-227ENST00000618441 POP1Q99575 1024 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms