RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 IDEP14735 1019 aa16.7■□□□□ 0.26
LIG1-219ENST00000600055 PFKFB1P16118 471 aa16.7■□□□□ 0.26
LIG1-219ENST00000600055 CMA1P23946 247 aa16.7■□□□□ 0.26
LIG1-219ENST00000600055 ANP32AP39687 249 aaKnown RBP16.7■□□□□ 0.26
LIG1-219ENST00000600055 SCNN1GP51170 649 aa16.7■□□□□ 0.26
LIG1-219ENST00000600055 BCAR1P56945 870 aa16.7■□□□□ 0.26
LIG1-219ENST00000600055 RNASELQ05823 741 aaKnown RBP16.7■□□□□ 0.26
LIG1-219ENST00000600055 CAMK1Q14012 370 aa16.7■□□□□ 0.26
LIG1-219ENST00000600055 DCAF4L1Q3SXM0 396 aa16.7■□□□□ 0.26
LIG1-219ENST00000600055 ZC2HC1CQ53FD0 456 aaPredicted RBP16.7■□□□□ 0.26
LIG1-219ENST00000600055 THNSL1Q8IYQ7 743 aa16.7■□□□□ 0.26
LIG1-219ENST00000600055 HACE1Q8IYU2 909 aa16.7■□□□□ 0.26
LIG1-219ENST00000600055 MRPL38Q96DV4 380 aaKnown RBP16.7■□□□□ 0.26
LIG1-219ENST00000600055 ZNF558Q96NG5 402 aa16.7■□□□□ 0.26
LIG1-219ENST00000600055 CDT1Q9H211 546 aa16.7■□□□□ 0.26
LIG1-219ENST00000600055 TNMDQ9H2S6 317 aa16.7■□□□□ 0.26
LIG1-219ENST00000600055 CUEDC2Q9H467 287 aa16.7■□□□□ 0.26
LIG1-219ENST00000600055 LMCD1Q9NZU5 365 aa16.7■□□□□ 0.26
LIG1-219ENST00000600055 DNAJB4Q9UDY4 337 aa16.7■□□□□ 0.26
LIG1-219ENST00000600055 TBX20Q9UMR3 447 aa16.7■□□□□ 0.26
LIG1-219ENST00000600055 GDAQ9Y2T3 454 aa16.7■□□□□ 0.26
LIG1-219ENST00000600055 COL6A3P12111 3177 aa16.7■□□□□ 0.26
LIG1-219ENST00000600055 MYO9BQ13459 2157 aa16.7■□□□□ 0.26
LIG1-219ENST00000600055 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.69■□□□□ 0.26
LIG1-219ENST00000600055 H0YCG3 227 aa16.69■□□□□ 0.26
LIG1-219ENST00000600055 INPPL1O15357 1258 aa16.69■□□□□ 0.26
LIG1-219ENST00000600055 FGF18O76093 207 aa16.69■□□□□ 0.26
LIG1-219ENST00000600055 RECQL4O94761 1208 aa16.69■□□□□ 0.26
LIG1-219ENST00000600055 HARSP12081 509 aaKnown RBP16.69■□□□□ 0.26
LIG1-219ENST00000600055 PROZP22891 400 aa16.69■□□□□ 0.26
LIG1-219ENST00000600055 CASP1P29466 404 aa16.69■□□□□ 0.26
LIG1-219ENST00000600055 PTPROQ16827 1216 aa16.69■□□□□ 0.26
LIG1-219ENST00000600055 ZNF568Q3ZCX4 644 aa16.69■□□□□ 0.26
LIG1-219ENST00000600055 GRAMD1CQ8IYS0 662 aa16.69■□□□□ 0.26
LIG1-219ENST00000600055 CEP120Q8N960 986 aa16.69■□□□□ 0.26
LIG1-219ENST00000600055 GSTCDQ8NEC7 633 aa16.69■□□□□ 0.26
LIG1-219ENST00000600055 POF1BQ8WVV4 589 aa16.69■□□□□ 0.26
LIG1-219ENST00000600055 FGFBP2Q9BYJ0 223 aa16.69■□□□□ 0.26
LIG1-219ENST00000600055 PRDM6Q9NQX0 595 aa16.69■□□□□ 0.26
LIG1-219ENST00000600055 PANK4Q9NVE7 773 aa16.69■□□□□ 0.26
LIG1-219ENST00000600055 SERTAD1Q9UHV2 236 aa16.69■□□□□ 0.26
LIG1-219ENST00000600055 EYSQ5T1H1 3165 aa16.69■□□□□ 0.26
LIG1-219ENST00000600055 FRMD3A2A2Y4 597 aa16.68■□□□□ 0.26
LIG1-219ENST00000600055 GALTP07902 379 aa16.68■□□□□ 0.26
LIG1-219ENST00000600055 SLC11A1P49279 550 aa16.68■□□□□ 0.26
LIG1-219ENST00000600055 OSTNP61366 133 aa16.68■□□□□ 0.26
LIG1-219ENST00000600055 GTF2BQ00403 316 aa16.68■□□□□ 0.26
LIG1-219ENST00000600055 HERC4Q5GLZ8 1057 aaPredicted RBP16.68■□□□□ 0.26
LIG1-219ENST00000600055 MPZL3Q6UWV2 235 aa16.68■□□□□ 0.26
LIG1-219ENST00000600055 ZNF720Q7Z2F6 126 aa16.68■□□□□ 0.26
LIG1-219ENST00000600055 TMEM173Q86WV6 379 aaPredicted RBP16.68■□□□□ 0.26
LIG1-219ENST00000600055 SLC39A11Q8N1S5 342 aa16.68■□□□□ 0.26
LIG1-219ENST00000600055 RSPH1Q8WYR4 309 aa16.68■□□□□ 0.26
LIG1-219ENST00000600055 KCNN1Q92952 543 aa16.68■□□□□ 0.26
LIG1-219ENST00000600055 BICD1Q96G01 975 aa16.68■□□□□ 0.26
LIG1-219ENST00000600055 TCHPQ9BT92 498 aa16.68■□□□□ 0.26
LIG1-219ENST00000600055 TRIM9Q9C026 710 aa16.68■□□□□ 0.26
LIG1-219ENST00000600055 HAPLN2Q9GZV7 340 aa16.68■□□□□ 0.26
LIG1-219ENST00000600055 LMAN2LQ9H0V9 348 aa16.68■□□□□ 0.26
LIG1-219ENST00000600055 GOLPH3LQ9H4A5 285 aa16.68■□□□□ 0.26
LIG1-219ENST00000600055 SPG21Q9NZD8 308 aa16.68■□□□□ 0.26
LIG1-219ENST00000600055 KANSL3Q9P2N6 904 aa16.68■□□□□ 0.26
LIG1-219ENST00000600055 ANKFY1Q9P2R3 1169 aa16.68■□□□□ 0.26
LIG1-219ENST00000600055 HPSEQ9Y251 543 aa16.68■□□□□ 0.26
LIG1-219ENST00000600055 PCDHGC5Q9Y5F6 944 aa16.68■□□□□ 0.26
LIG1-219ENST00000600055 ACTN4O43707 911 aaKnown RBP16.67■□□□□ 0.26
LIG1-219ENST00000600055 TOM1L1O75674 476 aa16.67■□□□□ 0.26
LIG1-219ENST00000600055 GAP43P17677 238 aa16.67■□□□□ 0.26
LIG1-219ENST00000600055 IRS1P35568 1242 aa16.67■□□□□ 0.26
LIG1-219ENST00000600055 AFMP43652 599 aa16.67■□□□□ 0.26
LIG1-219ENST00000600055 ALDH7A1P49419 539 aaKnown RBP16.67■□□□□ 0.26
LIG1-219ENST00000600055 CASP5P51878 434 aa16.67■□□□□ 0.26
LIG1-219ENST00000600055 NDUFA8P51970 172 aa16.67■□□□□ 0.26
LIG1-219ENST00000600055 ASIC1P78348 528 aa16.67■□□□□ 0.26
LIG1-219ENST00000600055 COASYQ13057 564 aa16.67■□□□□ 0.26
LIG1-219ENST00000600055 CSPP1Q1MSJ5 1256 aa16.67■□□□□ 0.26
LIG1-219ENST00000600055 SEZ6Q53EL9 994 aa16.67■□□□□ 0.26
LIG1-219ENST00000600055 ZPBP2Q6X784 338 aa16.67■□□□□ 0.26
LIG1-219ENST00000600055 FSIP1Q8NA03 581 aa16.67■□□□□ 0.26
LIG1-219ENST00000600055 BCL7CQ8WUZ0 217 aaPredicted RBP16.67■□□□□ 0.26
LIG1-219ENST00000600055 HPS3Q969F9 1004 aa16.67■□□□□ 0.26
LIG1-219ENST00000600055 FAM193BQ96PV7 902 aaPredicted RBP16.67■□□□□ 0.26
LIG1-219ENST00000600055 C7orf25Q9BPX7 421 aa16.67■□□□□ 0.26
LIG1-219ENST00000600055 LRRC27Q9C0I9 530 aa16.67■□□□□ 0.26
LIG1-219ENST00000600055 BLZF1Q9H2G9 400 aa16.67■□□□□ 0.26
LIG1-219ENST00000600055 IKZF4Q9H2S9 585 aa16.67■□□□□ 0.26
LIG1-219ENST00000600055 MRPL44Q9H9J2 332 aaKnown RBP16.67■□□□□ 0.26
LIG1-219ENST00000600055 SEL1LQ9UBV2 794 aa16.67■□□□□ 0.26
LIG1-219ENST00000600055 CIZ1Q9ULV3 898 aaPredicted RBP16.67■□□□□ 0.26
LIG1-219ENST00000600055 TRANK1O15050 2925 aa16.67■□□□□ 0.26
LIG1-219ENST00000600055 MYH11P35749 1972 aa16.66■□□□□ 0.26
LIG1-219ENST00000600055 TISP43B9A030 160 aa16.66■□□□□ 0.26
LIG1-219ENST00000600055 PTGESO14684 152 aa16.66■□□□□ 0.26
LIG1-219ENST00000600055 PPP1R37O75864 691 aa16.66■□□□□ 0.26
LIG1-219ENST00000600055 MYBP10242 640 aa16.66■□□□□ 0.26
LIG1-219ENST00000600055 MCF2P10911 925 aa16.66■□□□□ 0.26
LIG1-219ENST00000600055 PPM1AP35813 382 aa16.66■□□□□ 0.26
LIG1-219ENST00000600055 GRM5P41594 1212 aa16.66■□□□□ 0.26
LIG1-219ENST00000600055 LIG4P49917 911 aa16.66■□□□□ 0.26
LIG1-219ENST00000600055 ERVFC1P60507 584 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms