RNA–Protein interactions for RNA: ENST00000587263.5

RANBP3-208, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-208ENST00000587263 PHF20Q9BVI0 1012 aa16.46■□□□□ 0.23
RANBP3-208ENST00000587263 PRMT8Q9NR22 394 aaPredicted RBP16.46■□□□□ 0.23
RANBP3-208ENST00000587263 COL4A3BPQ9Y5P4 624 aa16.46■□□□□ 0.23
RANBP3-208ENST00000587263 CFAP47Q6ZTR5 3102 aa16.45■□□□□ 0.22
RANBP3-208ENST00000587263 MTCL1Q9Y4B5 1905 aaKnown RBP16.45■□□□□ 0.22
RANBP3-208ENST00000587263 STBD1O95210 358 aa16.45■□□□□ 0.22
RANBP3-208ENST00000587263 HNRNPA1P09651 372 aaKnown RBP eCLIP16.45■□□□□ 0.22
RANBP3-208ENST00000587263 CD72P21854 359 aa16.45■□□□□ 0.22
RANBP3-208ENST00000587263 HOXA11P31270 313 aaPredicted RBP16.45■□□□□ 0.22
RANBP3-208ENST00000587263 MLH1P40692 756 aa16.45■□□□□ 0.22
RANBP3-208ENST00000587263 LIN9Q5TKA1 542 aa16.45■□□□□ 0.22
RANBP3-208ENST00000587263 TSSK4Q6SA08 328 aa16.45■□□□□ 0.22
RANBP3-208ENST00000587263 TPRG1Q6ZUI0 275 aa16.45■□□□□ 0.22
RANBP3-208ENST00000587263 FGF13Q92913 245 aa16.45■□□□□ 0.22
RANBP3-208ENST00000587263 BRPF3Q9ULD4 1205 aa16.45■□□□□ 0.22
RANBP3-208ENST00000587263 MRPS17Q9Y2R5 130 aaKnown RBP16.45■□□□□ 0.22
RANBP3-208ENST00000587263 COL4A3Q01955 1670 aa16.45■□□□□ 0.22
RANBP3-208ENST00000587263 ARL5CA6NH57 179 aa16.44■□□□□ 0.22
RANBP3-208ENST00000587263 DDX11L8A8MPP1 907 aa16.44■□□□□ 0.22
RANBP3-208ENST00000587263 ADAMTS3O15072 1205 aa16.44■□□□□ 0.22
RANBP3-208ENST00000587263 LRP3O75074 770 aa16.44■□□□□ 0.22
RANBP3-208ENST00000587263 TARSP26639 723 aaKnown RBP16.44■□□□□ 0.22
RANBP3-208ENST00000587263 SCNN1GP51170 649 aa16.44■□□□□ 0.22
RANBP3-208ENST00000587263 RCAN1P53805 252 aa16.44■□□□□ 0.22
RANBP3-208ENST00000587263 NRLP54845 237 aa16.44■□□□□ 0.22
RANBP3-208ENST00000587263 LAIR1Q6GTX8 287 aa16.44■□□□□ 0.22
RANBP3-208ENST00000587263 SMG8Q8ND04 991 aaKnown RBP16.44■□□□□ 0.22
RANBP3-208ENST00000587263 SLC7A3Q8WY07 619 aa16.44■□□□□ 0.22
RANBP3-208ENST00000587263 B3GALT6Q96L58 329 aa16.44■□□□□ 0.22
RANBP3-208ENST00000587263 GAD1Q99259 594 aa16.44■□□□□ 0.22
RANBP3-208ENST00000587263 LSG1Q9H089 658 aaKnown RBP16.44■□□□□ 0.22
RANBP3-208ENST00000587263 FAM217BQ9NTX9 383 aaPredicted RBP16.44■□□□□ 0.22
RANBP3-208ENST00000587263 FBXW11Q9UKB1 542 aa16.44■□□□□ 0.22
RANBP3-208ENST00000587263 IPPQ9Y573 584 aa16.44■□□□□ 0.22
RANBP3-208ENST00000587263 F8W810 466 aa16.43■□□□□ 0.22
RANBP3-208ENST00000587263 XYLBO75191 536 aa16.43■□□□□ 0.22
RANBP3-208ENST00000587263 PSMD10O75832 226 aa16.43■□□□□ 0.22
RANBP3-208ENST00000587263 ERLIN2O94905 339 aa16.43■□□□□ 0.22
RANBP3-208ENST00000587263 RPL17P18621 184 aaKnown RBP16.43■□□□□ 0.22
RANBP3-208ENST00000587263 CDC27P30260 824 aa16.43■□□□□ 0.22
RANBP3-208ENST00000587263 HOXA9P31269 272 aa16.43■□□□□ 0.22
RANBP3-208ENST00000587263 USP11P51784 963 aa16.43■□□□□ 0.22
RANBP3-208ENST00000587263 NTHL1P78549 312 aa16.43■□□□□ 0.22
RANBP3-208ENST00000587263 SPEM2Q0P670 501 aa16.43■□□□□ 0.22
RANBP3-208ENST00000587263 PPP2R5DQ14738 602 aa16.43■□□□□ 0.22
RANBP3-208ENST00000587263 NECTIN1Q15223 517 aa16.43■□□□□ 0.22
RANBP3-208ENST00000587263 ZNF852Q6ZMS4 543 aa16.43■□□□□ 0.22
RANBP3-208ENST00000587263 EXOC8Q8IYI6 725 aa16.43■□□□□ 0.22
RANBP3-208ENST00000587263 PSPC1Q8WXF1 523 aaKnown RBP16.43■□□□□ 0.22
RANBP3-208ENST00000587263 KXD1Q9BQD3 176 aa16.43■□□□□ 0.22
RANBP3-208ENST00000587263 GPR62Q9BZJ7 368 aa16.43■□□□□ 0.22
RANBP3-208ENST00000587263 MINDY3Q9H8M7 445 aa16.43■□□□□ 0.22
RANBP3-208ENST00000587263 ADAM28Q9UKQ2 775 aa16.43■□□□□ 0.22
RANBP3-208ENST00000587263 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.43■□□□□ 0.22
RANBP3-208ENST00000587263 BAHCC1Q9P281 2608 aa16.42■□□□□ 0.22
RANBP3-208ENST00000587263 KLF18A0A0U1RQI7 1052 aa16.42■□□□□ 0.22
RANBP3-208ENST00000587263 CCDC196A0A1B0GTZ2 297 aa16.42■□□□□ 0.22
RANBP3-208ENST00000587263 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.42■□□□□ 0.22
RANBP3-208ENST00000587263 C8AP07357 584 aa16.42■□□□□ 0.22
RANBP3-208ENST00000587263 RETP07949 1114 aa16.42■□□□□ 0.22
RANBP3-208ENST00000587263 ADCY1Q08828 1119 aa16.42■□□□□ 0.22
RANBP3-208ENST00000587263 DMWDQ09019 674 aa16.42■□□□□ 0.22
RANBP3-208ENST00000587263 PPM1LQ5SGD2 360 aa16.42■□□□□ 0.22
RANBP3-208ENST00000587263 ANO5Q75V66 913 aa16.42■□□□□ 0.22
RANBP3-208ENST00000587263 HACE1Q8IYU2 909 aa16.42■□□□□ 0.22
RANBP3-208ENST00000587263 CELF5Q8N6W0 485 aaKnown RBP16.42■□□□□ 0.22
RANBP3-208ENST00000587263 CCDC148Q8NFR7 591 aa16.42■□□□□ 0.22
RANBP3-208ENST00000587263 DDX1Q92499 740 aaKnown RBP16.42■□□□□ 0.22
RANBP3-208ENST00000587263 CCDC51Q96ER9 411 aa16.42■□□□□ 0.22
RANBP3-208ENST00000587263 ZFP42Q96MM3 310 aa16.42■□□□□ 0.22
RANBP3-208ENST00000587263 ANP32EQ9BTT0 268 aa16.42■□□□□ 0.22
RANBP3-208ENST00000587263 POLIQ9UNA4 740 aa16.42■□□□□ 0.22
RANBP3-208ENST00000587263 SRGAP2CP0DJJ0 459 aa16.41■□□□□ 0.22
RANBP3-208ENST00000587263 AXLP30530 894 aa16.41■□□□□ 0.22
RANBP3-208ENST00000587263 PSMC5P62195 406 aa16.41■□□□□ 0.22
RANBP3-208ENST00000587263 NCBP1Q09161 790 aaKnown RBP16.41■□□□□ 0.22
RANBP3-208ENST00000587263 MTAPQ13126 283 aa16.41■□□□□ 0.22
RANBP3-208ENST00000587263 PCBP1Q15365 356 aaKnown RBP eCLIP16.41■□□□□ 0.22
RANBP3-208ENST00000587263 RNF20Q5VTR2 975 aa16.41■□□□□ 0.22
RANBP3-208ENST00000587263 PLA2G4FQ68DD2 849 aa16.41■□□□□ 0.22
RANBP3-208ENST00000587263 NOTUMQ6P988 496 aa16.41■□□□□ 0.22
RANBP3-208ENST00000587263 B3GNT9Q6UX72 402 aa16.41■□□□□ 0.22
RANBP3-208ENST00000587263 PRPF31Q8WWY3 499 aaKnown RBP16.41■□□□□ 0.22
RANBP3-208ENST00000587263 GJA10Q969M2 543 aa16.41■□□□□ 0.22
RANBP3-208ENST00000587263 IER2Q9BTL4 223 aa16.41■□□□□ 0.22
RANBP3-208ENST00000587263 EIF2AQ9BY44 585 aaKnown RBP16.41■□□□□ 0.22
RANBP3-208ENST00000587263 RNF39Q9H2S5 420 aa16.41■□□□□ 0.22
RANBP3-208ENST00000587263 ANGPTL2Q9UKU9 493 aa16.41■□□□□ 0.22
RANBP3-208ENST00000587263 GIT1Q9Y2X7 761 aa16.41■□□□□ 0.22
RANBP3-208ENST00000587263 PPME1Q9Y570 386 aa16.41■□□□□ 0.22
RANBP3-208ENST00000587263 SF3B1O75533 1304 aaKnown RBP eCLIP16.41■□□□□ 0.221e-6■■■■■ 147.7
RANBP3-208ENST00000587263 FOXD2O60548 495 aaPredicted RBP16.4■□□□□ 0.22
RANBP3-208ENST00000587263 DKC1O60832 514 aaKnown RBP eCLIP16.4■□□□□ 0.22
RANBP3-208ENST00000587263 TADA2AO75478 443 aa16.4■□□□□ 0.22
RANBP3-208ENST00000587263 ADD1P35611 737 aaKnown RBP16.4■□□□□ 0.22
RANBP3-208ENST00000587263 LAMTOR4Q0VGL1 99 aa16.4■□□□□ 0.22
RANBP3-208ENST00000587263 LPAL2Q16609 132 aa16.4■□□□□ 0.22
RANBP3-208ENST00000587263 PRSS55Q6UWB4 352 aaPredicted RBP16.4■□□□□ 0.22
RANBP3-208ENST00000587263 DHX32Q7L7V1 743 aaKnown RBP16.4■□□□□ 0.22
RANBP3-208ENST00000587263 NPAS3Q8IXF0 933 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms