RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 UBXN11Q5T124 520 aa11.43□□□□□ -0.58
TOP3A-212ENST00000582122 SLFN12LQ6IEE8 588 aa11.43□□□□□ -0.58
TOP3A-212ENST00000582122 PDE12Q6L8Q7 609 aaKnown RBP11.43□□□□□ -0.58
TOP3A-212ENST00000582122 MPZL3Q6UWV2 235 aa11.43□□□□□ -0.58
TOP3A-212ENST00000582122 AGMOQ6ZNB7 445 aa11.43□□□□□ -0.58
TOP3A-212ENST00000582122 ZNF720Q7Z2F6 126 aa11.43□□□□□ -0.58
TOP3A-212ENST00000582122 DNAJC19Q96DA6 116 aa11.43□□□□□ -0.58
TOP3A-212ENST00000582122 BICD1Q96G01 975 aa11.43□□□□□ -0.58
TOP3A-212ENST00000582122 ZNF558Q96NG5 402 aa11.43□□□□□ -0.58
TOP3A-212ENST00000582122 CASD1Q96PB1 797 aa11.43□□□□□ -0.58
TOP3A-212ENST00000582122 RPS6KC1Q96S38 1066 aa11.43□□□□□ -0.58
TOP3A-212ENST00000582122 TSPAN18Q96SJ8 248 aa11.43□□□□□ -0.58
TOP3A-212ENST00000582122 KIFC3Q9BVG8 833 aa11.43□□□□□ -0.58
TOP3A-212ENST00000582122 TRIM9Q9C026 710 aa11.43□□□□□ -0.58
TOP3A-212ENST00000582122 PDZD7Q9H5P4 517 aa11.43□□□□□ -0.58
TOP3A-212ENST00000582122 MRPL44Q9H9J2 332 aaKnown RBP11.43□□□□□ -0.58
TOP3A-212ENST00000582122 PUF60Q9UHX1 559 aaKnown RBP11.43□□□□□ -0.58
TOP3A-212ENST00000582122 TBX20Q9UMR3 447 aa11.43□□□□□ -0.58
TOP3A-212ENST00000582122 HPSEQ9Y251 543 aa11.43□□□□□ -0.58
TOP3A-212ENST00000582122 GBF1Q92538 1859 aa11.42□□□□□ -0.58
TOP3A-212ENST00000582122 A0A087X0B3 334 aa11.42□□□□□ -0.58
TOP3A-212ENST00000582122 FSD2A1L4K1 749 aa11.42□□□□□ -0.58
TOP3A-212ENST00000582122 HNRNPDLO14979 420 aaKnown RBP11.42□□□□□ -0.58
TOP3A-212ENST00000582122 OFD1O75665 1012 aa11.42□□□□□ -0.58
TOP3A-212ENST00000582122 LIG4P49917 911 aa11.42□□□□□ -0.58
TOP3A-212ENST00000582122 ASIC1P78348 528 aa11.42□□□□□ -0.58
TOP3A-212ENST00000582122 POU5F1Q01860 360 aaKnown RBP11.42□□□□□ -0.58
TOP3A-212ENST00000582122 ZNF568Q3ZCX4 644 aa11.42□□□□□ -0.58
TOP3A-212ENST00000582122 PAN2Q504Q3 1202 aaKnown RBP11.42□□□□□ -0.58
TOP3A-212ENST00000582122 CLLU1OSQ5K130 101 aa11.42□□□□□ -0.58
TOP3A-212ENST00000582122 NT5DC1Q5TFE4 455 aa11.42□□□□□ -0.58
TOP3A-212ENST00000582122 MAP4K3Q8IVH8 894 aa11.42□□□□□ -0.58
TOP3A-212ENST00000582122 FSIP1Q8NA03 581 aa11.42□□□□□ -0.58
TOP3A-212ENST00000582122 SMG8Q8ND04 991 aaKnown RBP11.42□□□□□ -0.58
TOP3A-212ENST00000582122 HELQQ8TDG4 1101 aa11.42□□□□□ -0.58
TOP3A-212ENST00000582122 LRRC15Q8TF66 581 aa11.42□□□□□ -0.58
TOP3A-212ENST00000582122 PPM1EQ8WY54 764 aa11.42□□□□□ -0.58
TOP3A-212ENST00000582122 PPP2R3CQ969Q6 453 aa11.42□□□□□ -0.58
TOP3A-212ENST00000582122 FAM122AQ96E09 287 aa11.42□□□□□ -0.58
TOP3A-212ENST00000582122 IPO9Q96P70 1041 aaKnown RBP11.42□□□□□ -0.58
TOP3A-212ENST00000582122 ACCSQ96QU6 501 aa11.42□□□□□ -0.58
TOP3A-212ENST00000582122 TMEM175Q9BSA9 504 aa11.42□□□□□ -0.58
TOP3A-212ENST00000582122 EIF2AQ9BY44 585 aaKnown RBP11.42□□□□□ -0.58
TOP3A-212ENST00000582122 GTPBP4Q9BZE4 634 aaKnown RBP11.42□□□□□ -0.58
TOP3A-212ENST00000582122 PRDM12Q9H4Q4 367 aa11.42□□□□□ -0.58
TOP3A-212ENST00000582122 TMEM206Q9H813 350 aa11.42□□□□□ -0.58
TOP3A-212ENST00000582122 POLD4Q9HCU8 107 aa11.42□□□□□ -0.58
TOP3A-212ENST00000582122 TYW1Q9NV66 732 aaKnown RBP11.42□□□□□ -0.58
TOP3A-212ENST00000582122 LZTS1Q9Y250 596 aa11.42□□□□□ -0.58
TOP3A-212ENST00000582122 MRPL42Q9Y6G3 142 aaKnown RBP11.42□□□□□ -0.58
TOP3A-212ENST00000582122 TCHHQ07283 1943 aa11.42□□□□□ -0.58
TOP3A-212ENST00000582122 UBE4BO95155 1302 aa11.41□□□□□ -0.58
TOP3A-212ENST00000582122 RALGAPA2Q2PPJ7 1873 aa11.41□□□□□ -0.58
TOP3A-212ENST00000582122 A0A1B0GVL5 298 aa11.41□□□□□ -0.58
TOP3A-212ENST00000582122 NCK2O43639 380 aa11.41□□□□□ -0.58
TOP3A-212ENST00000582122 ALDH2P05091 517 aa11.41□□□□□ -0.58
TOP3A-212ENST00000582122 PROZP22891 400 aa11.41□□□□□ -0.58
TOP3A-212ENST00000582122 GRM5P41594 1212 aa11.41□□□□□ -0.58
TOP3A-212ENST00000582122 SNRPFP62306 86 aaKnown RBP11.41□□□□□ -0.58
TOP3A-212ENST00000582122 PLCB3Q01970 1234 aa11.41□□□□□ -0.58
TOP3A-212ENST00000582122 CACNB1Q02641 598 aaPredicted RBP11.41□□□□□ -0.58
TOP3A-212ENST00000582122 MCL1Q07820 350 aa11.41□□□□□ -0.58
TOP3A-212ENST00000582122 GRIK3Q13003 919 aa11.41□□□□□ -0.58
TOP3A-212ENST00000582122 PSMD2Q13200 908 aa11.41□□□□□ -0.58
TOP3A-212ENST00000582122 GPM6BQ13491 265 aa11.41□□□□□ -0.58
TOP3A-212ENST00000582122 NOLC1Q14978 699 aaKnown RBP eCLIP11.41□□□□□ -0.58
TOP3A-212ENST00000582122 TIGD5Q53EQ6 642 aa11.41□□□□□ -0.58
TOP3A-212ENST00000582122 UNC13DQ70J99 1090 aa11.41□□□□□ -0.58
TOP3A-212ENST00000582122 SFR1Q86XK3 245 aa11.41□□□□□ -0.58
TOP3A-212ENST00000582122 MRPL38Q96DV4 380 aaKnown RBP11.41□□□□□ -0.58
TOP3A-212ENST00000582122 ACAP3Q96P50 834 aa11.41□□□□□ -0.58
TOP3A-212ENST00000582122 C17orf80Q9BSJ5 609 aa11.41□□□□□ -0.58
TOP3A-212ENST00000582122 TARS2Q9BW92 718 aaKnown RBP11.41□□□□□ -0.58
TOP3A-212ENST00000582122 NXF3Q9H4D5 531 aaKnown RBP11.41□□□□□ -0.58
TOP3A-212ENST00000582122 PLEKHA5Q9HAU0 1116 aa11.41□□□□□ -0.58
TOP3A-212ENST00000582122 PTPRHQ9HD43 1115 aa11.41□□□□□ -0.58
TOP3A-212ENST00000582122 RNF19AQ9NV58 838 aa11.41□□□□□ -0.58
TOP3A-212ENST00000582122 SPG21Q9NZD8 308 aa11.41□□□□□ -0.58
TOP3A-212ENST00000582122 PARP2Q9UGN5 583 aa11.41□□□□□ -0.58
TOP3A-212ENST00000582122 ARL5CA6NH57 179 aa11.4□□□□□ -0.58
TOP3A-212ENST00000582122 KIAA0391O15091 583 aaKnown RBP11.4□□□□□ -0.58
TOP3A-212ENST00000582122 EIF3DO15371 548 aaKnown RBP eCLIP11.4□□□□□ -0.58
TOP3A-212ENST00000582122 ACTN4O43707 911 aaKnown RBP11.4□□□□□ -0.58
TOP3A-212ENST00000582122 KIF20AO95235 890 aa11.4□□□□□ -0.58
TOP3A-212ENST00000582122 GCNT3O95395 438 aa11.4□□□□□ -0.58
TOP3A-212ENST00000582122 CLTAP09496 248 aa11.4□□□□□ -0.58
TOP3A-212ENST00000582122 IGFBP4P22692 258 aa11.4□□□□□ -0.58
TOP3A-212ENST00000582122 MATR3P43243 847 aaKnown RBP eCLIP11.4□□□□□ -0.58
TOP3A-212ENST00000582122 NDUFA8P51970 172 aa11.4□□□□□ -0.58
TOP3A-212ENST00000582122 COASYQ13057 564 aa11.4□□□□□ -0.58
TOP3A-212ENST00000582122 FAM26FQ5R3K3 315 aa11.4□□□□□ -0.58
TOP3A-212ENST00000582122 L1TD1Q5T7N2 865 aaKnown RBP11.4□□□□□ -0.58
TOP3A-212ENST00000582122 KCNT2Q6UVM3 1135 aa11.4□□□□□ -0.58
TOP3A-212ENST00000582122 TAS1R3Q7RTX0 852 aa11.4□□□□□ -0.58
TOP3A-212ENST00000582122 CD302Q8IX05 232 aa11.4□□□□□ -0.58
TOP3A-212ENST00000582122 THNSL1Q8IYQ7 743 aa11.4□□□□□ -0.58
TOP3A-212ENST00000582122 SYCP3Q8IZU3 236 aa11.4□□□□□ -0.58
TOP3A-212ENST00000582122 COLGALT1Q8NBJ5 622 aa11.4□□□□□ -0.58
TOP3A-212ENST00000582122 LPPQ93052 612 aa11.4□□□□□ -0.58
TOP3A-212ENST00000582122 TIGD1Q96MW7 591 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms