RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 TRIM50Q86XT4 487 aa19.04■□□□□ 0.64
ATPAF1-214ENST00000576409 CALR3Q96L12 384 aaKnown RBP19.04■□□□□ 0.64
ATPAF1-214ENST00000576409 UBN1Q9NPG3 1134 aa19.04■□□□□ 0.64
ATPAF1-214ENST00000576409 SUCLA2Q9P2R7 463 aaPredicted RBP19.04■□□□□ 0.64
ATPAF1-214ENST00000576409 FRMPD1Q5SYB0 1578 aa19.04■□□□□ 0.64
ATPAF1-214ENST00000576409 ARFIP2P53365 341 aa19.04■□□□□ 0.64
ATPAF1-214ENST00000576409 ZNF844Q08AG5 666 aa19.04■□□□□ 0.64
ATPAF1-214ENST00000576409 KCNA1Q09470 495 aa19.04■□□□□ 0.64
ATPAF1-214ENST00000576409 AADACL2Q6P093 401 aa19.04■□□□□ 0.64
ATPAF1-214ENST00000576409 C16orf86Q6ZW13 317 aa19.04■□□□□ 0.64
ATPAF1-214ENST00000576409 ZBTB8OSQ8IWT0 167 aa19.04■□□□□ 0.64
ATPAF1-214ENST00000576409 SLC4A7Q9Y6M7 1214 aa19.04■□□□□ 0.64
ATPAF1-214ENST00000576409 PDE4DIPQ5VU43 2346 aa19.04■□□□□ 0.64
ATPAF1-214ENST00000576409 VIRMAQ69YN4 1812 aaKnown RBP19.04■□□□□ 0.64
ATPAF1-214ENST00000576409 COPEO14579 308 aa19.03■□□□□ 0.64
ATPAF1-214ENST00000576409 MAPK7Q13164 816 aa19.03■□□□□ 0.64
ATPAF1-214ENST00000576409 COG2Q14746 738 aa19.03■□□□□ 0.64
ATPAF1-214ENST00000576409 SLC20A1Q8WUM9 679 aa19.03■□□□□ 0.64
ATPAF1-214ENST00000576409 NUF2Q9BZD4 464 aa19.03■□□□□ 0.64
ATPAF1-214ENST00000576409 TARSP26639 723 aaKnown RBP19.03■□□□□ 0.64
ATPAF1-214ENST00000576409 RHPN2Q8IUC4 686 aa19.03■□□□□ 0.64
ATPAF1-214ENST00000576409 VGLL2Q8N8G2 317 aa19.03■□□□□ 0.64
ATPAF1-214ENST00000576409 FBXL13Q8NEE6 735 aa19.03■□□□□ 0.64
ATPAF1-214ENST00000576409 TMEM131LA2VDJ0 1609 aa19.03■□□□□ 0.64
ATPAF1-214ENST00000576409 KLRC4O43908 158 aa19.03■□□□□ 0.64
ATPAF1-214ENST00000576409 QARSP47897 775 aaKnown RBP19.03■□□□□ 0.64
ATPAF1-214ENST00000576409 BIRC2Q13490 618 aa19.03■□□□□ 0.64
ATPAF1-214ENST00000576409 CDAN1Q8IWY9 1227 aa19.03■□□□□ 0.64
ATPAF1-214ENST00000576409 LRRC43Q8N309 656 aa19.03■□□□□ 0.64
ATPAF1-214ENST00000576409 MCUQ8NE86 351 aa19.03■□□□□ 0.64
ATPAF1-214ENST00000576409 VTI1AQ96AJ9 217 aa19.03■□□□□ 0.64
ATPAF1-214ENST00000576409 FAF2Q96CS3 445 aa19.03■□□□□ 0.64
ATPAF1-214ENST00000576409 DDX27Q96GQ7 796 aaKnown RBP19.03■□□□□ 0.64
ATPAF1-214ENST00000576409 VCPKMTQ9H867 229 aa19.03■□□□□ 0.64
ATPAF1-214ENST00000576409 STOML1Q9UBI4 398 aa19.03■□□□□ 0.64
ATPAF1-214ENST00000576409 RTN2O75298 545 aa19.03■□□□□ 0.64
ATPAF1-214ENST00000576409 CDH16O75309 829 aa19.03■□□□□ 0.64
ATPAF1-214ENST00000576409 ANP32DO95626 131 aa19.03■□□□□ 0.64
ATPAF1-214ENST00000576409 SLC8A3P57103 927 aa19.03■□□□□ 0.64
ATPAF1-214ENST00000576409 DRP2Q13474 957 aa19.03■□□□□ 0.64
ATPAF1-214ENST00000576409 ARMC2Q8NEN0 867 aa19.03■□□□□ 0.64
ATPAF1-214ENST00000576409 NLRP4Q96MN2 994 aa19.03■□□□□ 0.64
ATPAF1-214ENST00000576409 HESX1Q9UBX0 185 aa19.03■□□□□ 0.64
ATPAF1-214ENST00000576409 hCG_2014768A0A024R1R8 64 aa19.02■□□□□ 0.64
ATPAF1-214ENST00000576409 C1orf146Q5VVC0 180 aa19.02■□□□□ 0.64
ATPAF1-214ENST00000576409 PLA2G4FQ68DD2 849 aa19.02■□□□□ 0.64
ATPAF1-214ENST00000576409 HSPBP1Q9NZL4 362 aa19.02■□□□□ 0.64
ATPAF1-214ENST00000576409 ZBTB39O15060 712 aa19.02■□□□□ 0.64
ATPAF1-214ENST00000576409 TMEM253P0C7T8 217 aa19.02■□□□□ 0.64
ATPAF1-214ENST00000576409 RPA1P27694 616 aa19.02■□□□□ 0.64
ATPAF1-214ENST00000576409 RAPH1Q70E73 1250 aa19.02■□□□□ 0.64
ATPAF1-214ENST00000576409 ATL2Q8NHH9 583 aa19.02■□□□□ 0.64
ATPAF1-214ENST00000576409 ABTB1Q969K4 478 aaPredicted RBP19.02■□□□□ 0.64
ATPAF1-214ENST00000576409 STAMBPL1Q96FJ0 436 aa19.02■□□□□ 0.64
ATPAF1-214ENST00000576409 PFDN1O60925 122 aa19.02■□□□□ 0.63
ATPAF1-214ENST00000576409 GNA15P30679 374 aa19.02■□□□□ 0.63
ATPAF1-214ENST00000576409 ARL4CP56559 192 aa19.02■□□□□ 0.63
ATPAF1-214ENST00000576409 NFIAQ12857 509 aa19.02■□□□□ 0.63
ATPAF1-214ENST00000576409 ORC2Q13416 577 aaPredicted RBP19.02■□□□□ 0.63
ATPAF1-214ENST00000576409 MAP7Q14244 749 aa19.02■□□□□ 0.63
ATPAF1-214ENST00000576409 INTS5Q6P9B9 1019 aaKnown RBP19.02■□□□□ 0.63
ATPAF1-214ENST00000576409 RUBCNQ92622 972 aa19.02■□□□□ 0.63
ATPAF1-214ENST00000576409 CAVIN3Q969G5 261 aa19.02■□□□□ 0.63
ATPAF1-214ENST00000576409 GABBR1Q9UBS5 961 aa19.02■□□□□ 0.63
ATPAF1-214ENST00000576409 SWSAP1Q6NVH7 229 aa19.01■□□□□ 0.63
ATPAF1-214ENST00000576409 MAP7D3Q8IWC1 876 aa19.01■□□□□ 0.63
ATPAF1-214ENST00000576409 SULF1Q8IWU6 871 aa19.01■□□□□ 0.63
ATPAF1-214ENST00000576409 DNAAF3Q8N9W5 541 aa19.01■□□□□ 0.63
ATPAF1-214ENST00000576409 DCAF4Q8WV16 495 aa19.01■□□□□ 0.63
ATPAF1-214ENST00000576409 PPWD1Q96BP3 646 aaKnown RBP19.01■□□□□ 0.63
ATPAF1-214ENST00000576409 CARD9Q9H257 536 aa19.01■□□□□ 0.63
ATPAF1-214ENST00000576409 ZNF263O14978 683 aa19.01■□□□□ 0.63
ATPAF1-214ENST00000576409 MMP10P09238 476 aa19.01■□□□□ 0.63
ATPAF1-214ENST00000576409 SLC12A2P55011 1212 aa19.01■□□□□ 0.63
ATPAF1-214ENST00000576409 CDK17Q00537 523 aa19.01■□□□□ 0.63
ATPAF1-214ENST00000576409 PPP1R18Q6NYC8 613 aa19.01■□□□□ 0.63
ATPAF1-214ENST00000576409 RHOT1Q8IXI2 618 aa19.01■□□□□ 0.63
ATPAF1-214ENST00000576409 LINC00116Q8NCU8 138 aa19.01■□□□□ 0.63
ATPAF1-214ENST00000576409 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.01■□□□□ 0.63
ATPAF1-214ENST00000576409 ACP6Q9NPH0 428 aa19.01■□□□□ 0.63
ATPAF1-214ENST00000576409 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.01■□□□□ 0.63
ATPAF1-214ENST00000576409 ZBED1O96006 694 aa19.01■□□□□ 0.63
ATPAF1-214ENST00000576409 PBX1P40424 430 aa19.01■□□□□ 0.63
ATPAF1-214ENST00000576409 RNASELQ05823 741 aaKnown RBP19.01■□□□□ 0.63
ATPAF1-214ENST00000576409 MIIPQ5JXC2 388 aa19.01■□□□□ 0.63
ATPAF1-214ENST00000576409 NCAPG2Q86XI2 1143 aa19.01■□□□□ 0.63
ATPAF1-214ENST00000576409 NIM1KQ8IY84 436 aa19.01■□□□□ 0.63
ATPAF1-214ENST00000576409 TBC1D16Q8TBP0 767 aa19.01■□□□□ 0.63
ATPAF1-214ENST00000576409 GPRC5CQ9NQ84 441 aa19.01■□□□□ 0.63
ATPAF1-214ENST00000576409 PPFIA2O75334 1257 aa19■□□□□ 0.63
ATPAF1-214ENST00000576409 LARP7Q4G0J3 582 aaKnown RBP eCLIP19■□□□□ 0.63
ATPAF1-214ENST00000576409 CAPN9O14815 690 aa19■□□□□ 0.63
ATPAF1-214ENST00000576409 P4HBP07237 508 aaKnown RBP19■□□□□ 0.63
ATPAF1-214ENST00000576409 KCNMA1Q12791 1236 aa19■□□□□ 0.63
ATPAF1-214ENST00000576409 ASPHQ12797 758 aa19■□□□□ 0.63
ATPAF1-214ENST00000576409 RIMS1Q86UR5 1692 aaKnown RBP19■□□□□ 0.63
ATPAF1-214ENST00000576409 POP1Q99575 1024 aaKnown RBP19■□□□□ 0.63
ATPAF1-214ENST00000576409 DIP2BQ9P265 1576 aa19■□□□□ 0.63
ATPAF1-214ENST00000576409 HAO1Q9UJM8 370 aa19■□□□□ 0.63
ATPAF1-214ENST00000576409 SIK3Q9Y2K2 1263 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms