RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 Q4G0T1 1027 aa16.41■□□□□ 0.22
USP43-202ENST00000570475 SH3BP5LQ7L8J4 393 aa16.41■□□□□ 0.22
USP43-202ENST00000570475 FAM213AQ9BRX8 229 aa16.41■□□□□ 0.22
USP43-202ENST00000570475 FAM129AQ9BZQ8 928 aa16.41■□□□□ 0.22
USP43-202ENST00000570475 ZNF148Q9UQR1 794 aa16.41■□□□□ 0.22
USP43-202ENST00000570475 IRS2Q9Y4H2 1338 aa16.41■□□□□ 0.22
USP43-202ENST00000570475 PODXLO00592 558 aa16.41■□□□□ 0.22
USP43-202ENST00000570475 GJB6O95452 261 aa16.41■□□□□ 0.22
USP43-202ENST00000570475 COILP38432 576 aaPredicted RBP16.41■□□□□ 0.22
USP43-202ENST00000570475 DYNLT1P63172 113 aa16.41■□□□□ 0.22
USP43-202ENST00000570475 DHX34Q14147 1143 aaKnown RBP16.41■□□□□ 0.22
USP43-202ENST00000570475 RASA3Q14644 834 aa16.41■□□□□ 0.22
USP43-202ENST00000570475 ZNF449Q6P9G9 518 aa16.41■□□□□ 0.22
USP43-202ENST00000570475 HHIPL2Q6UWX4 724 aa16.41■□□□□ 0.22
USP43-202ENST00000570475 HSD17B14Q9BPX1 270 aa16.41■□□□□ 0.22
USP43-202ENST00000570475 CCDC77Q9BR77 488 aa16.41■□□□□ 0.22
USP43-202ENST00000570475 OLFML3Q9NRN5 406 aa16.41■□□□□ 0.22
USP43-202ENST00000570475 MIF4GDA9UHW6 222 aaKnown RBP16.4■□□□□ 0.22
USP43-202ENST00000570475 DRD4P21917 467 aa16.4■□□□□ 0.22
USP43-202ENST00000570475 JAM2P57087 298 aa16.4■□□□□ 0.22
USP43-202ENST00000570475 DLGAP5Q15398 846 aa16.4■□□□□ 0.22
USP43-202ENST00000570475 FAM182AQ5T1J6 154 aa16.4■□□□□ 0.22
USP43-202ENST00000570475 SYCP2LQ5T4T6 812 aa16.4■□□□□ 0.22
USP43-202ENST00000570475 DUPD1Q68J44 220 aa16.4■□□□□ 0.22
USP43-202ENST00000570475 CC2D2BQ6DHV5 1058 aa16.4■□□□□ 0.22
USP43-202ENST00000570475 SLC13A5Q86YT5 568 aaPredicted RBP16.4■□□□□ 0.22
USP43-202ENST00000570475 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.4■□□□□ 0.22
USP43-202ENST00000570475 CRAMP1Q96RY5 1269 aa16.4■□□□□ 0.22
USP43-202ENST00000570475 PCDHB18PQ96TA0 734 aa16.4■□□□□ 0.22
USP43-202ENST00000570475 GLIS2Q9BZE0 524 aaPredicted RBP16.4■□□□□ 0.22
USP43-202ENST00000570475 DENND3A2RUS2 1198 aa16.4■□□□□ 0.22
USP43-202ENST00000570475 UBOX5O94941 541 aa16.4■□□□□ 0.22
USP43-202ENST00000570475 FNTAP49354 379 aa16.4■□□□□ 0.22
USP43-202ENST00000570475 ERFP50548 548 aa16.4■□□□□ 0.22
USP43-202ENST00000570475 SLMAPQ14BN4 828 aa16.4■□□□□ 0.22
USP43-202ENST00000570475 VPS72Q15906 364 aa16.4■□□□□ 0.22
USP43-202ENST00000570475 CYFIP1Q7L576 1253 aa16.4■□□□□ 0.22
USP43-202ENST00000570475 EPM2AIP1Q7L775 607 aaPredicted RBP16.4■□□□□ 0.22
USP43-202ENST00000570475 TMEM117Q9H0C3 514 aa16.4■□□□□ 0.22
USP43-202ENST00000570475 CDC42EP4Q9H3Q1 356 aaKnown RBP16.4■□□□□ 0.22
USP43-202ENST00000570475 KCNH7Q9NS40 1196 aa16.4■□□□□ 0.22
USP43-202ENST00000570475 ANKFY1Q9P2R3 1169 aa16.4■□□□□ 0.22
USP43-202ENST00000570475 DDX60Q8IY21 1712 aaKnown RBP16.4■□□□□ 0.22
USP43-202ENST00000570475 RTN2O75298 545 aa16.4■□□□□ 0.22
USP43-202ENST00000570475 SUN1O94901 812 aa16.4■□□□□ 0.22
USP43-202ENST00000570475 DGKZQ13574 1117 aa16.4■□□□□ 0.22
USP43-202ENST00000570475 TRPM8Q7Z2W7 1104 aa16.4■□□□□ 0.22
USP43-202ENST00000570475 TUFT1Q9NNX1 390 aa16.4■□□□□ 0.22
USP43-202ENST00000570475 CHST7Q9NS84 486 aa16.4■□□□□ 0.22
USP43-202ENST00000570475 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.4■□□□□ 0.22
USP43-202ENST00000570475 CYP3A7-CYP3A51PA0A087WV96 503 aa16.39■□□□□ 0.21
USP43-202ENST00000570475 CYP3A7P24462 503 aa16.39■□□□□ 0.21
USP43-202ENST00000570475 NSFP46459 744 aaKnown RBP16.39■□□□□ 0.21
USP43-202ENST00000570475 SIAH1Q8IUQ4 282 aa16.39■□□□□ 0.21
USP43-202ENST00000570475 TAS1R2Q8TE23 839 aa16.39■□□□□ 0.21
USP43-202ENST00000570475 PRCCQ92733 491 aaPredicted RBP16.39■□□□□ 0.21
USP43-202ENST00000570475 CEP170P1Q96L14 293 aa16.39■□□□□ 0.21
USP43-202ENST00000570475 ECT2Q9H8V3 914 aa16.39■□□□□ 0.21
USP43-202ENST00000570475 KMT5AQ9NQR1 393 aa16.39■□□□□ 0.21
USP43-202ENST00000570475 STK24Q9Y6E0 443 aa16.39■□□□□ 0.21
USP43-202ENST00000570475 A0A0A6YYK5 440 aaPredicted RBP16.39■□□□□ 0.21
USP43-202ENST00000570475 SKAP2O75563 359 aaPredicted RBP16.39■□□□□ 0.21
USP43-202ENST00000570475 SCP2P22307 547 aa16.39■□□□□ 0.21
USP43-202ENST00000570475 WDR44Q5JSH3 913 aa16.39■□□□□ 0.21
USP43-202ENST00000570475 INTUQ9ULD6 942 aa16.39■□□□□ 0.21
USP43-202ENST00000570475 H0YIN7 160 aa16.39■□□□□ 0.21
USP43-202ENST00000570475 NFIBO00712 420 aa16.39■□□□□ 0.21
USP43-202ENST00000570475 NPR1P16066 1061 aa16.39■□□□□ 0.21
USP43-202ENST00000570475 ITGA8P53708 1063 aa16.39■□□□□ 0.21
USP43-202ENST00000570475 SNRNP35Q16560 246 aaKnown RBP16.39■□□□□ 0.21
USP43-202ENST00000570475 PODNQ7Z5L7 613 aa16.39■□□□□ 0.21
USP43-202ENST00000570475 MICAL1Q8TDZ2 1067 aa16.39■□□□□ 0.21
USP43-202ENST00000570475 SLC5A5Q92911 643 aa16.39■□□□□ 0.21
USP43-202ENST00000570475 ZNF341Q9BYN7 854 aa16.39■□□□□ 0.21
USP43-202ENST00000570475 TMEM206Q9H813 350 aa16.39■□□□□ 0.21
USP43-202ENST00000570475 KLHL14Q9P2G3 628 aa16.39■□□□□ 0.21
USP43-202ENST00000570475 TRIM33Q9UPN9 1127 aa16.39■□□□□ 0.21
USP43-202ENST00000570475 STXBP5LQ9Y2K9 1186 aa16.39■□□□□ 0.21
USP43-202ENST00000570475 ZHX2Q9Y6X8 837 aa16.39■□□□□ 0.21
USP43-202ENST00000570475 SHANK3Q9BYB0 1731 aa16.38■□□□□ 0.21
USP43-202ENST00000570475 H0Y3Z8 333 aa16.38■□□□□ 0.21
USP43-202ENST00000570475 EIF3DO15371 548 aaKnown RBP eCLIP16.38■□□□□ 0.21
USP43-202ENST00000570475 PPFIA2O75334 1257 aa16.38■□□□□ 0.21
USP43-202ENST00000570475 POTEJP0CG39 1038 aa16.38■□□□□ 0.21
USP43-202ENST00000570475 HOXA7P31268 230 aaPredicted RBP16.38■□□□□ 0.21
USP43-202ENST00000570475 CETN2P41208 172 aa16.38■□□□□ 0.21
USP43-202ENST00000570475 SEZ6Q53EL9 994 aa16.38■□□□□ 0.21
USP43-202ENST00000570475 ERMARDQ5T6L9 678 aa16.38■□□□□ 0.21
USP43-202ENST00000570475 CDAN1Q8IWY9 1227 aa16.38■□□□□ 0.21
USP43-202ENST00000570475 RSRC1Q96IZ7 334 aaKnown RBP16.38■□□□□ 0.21
USP43-202ENST00000570475 TGS1Q96RS0 853 aaKnown RBP16.38■□□□□ 0.21
USP43-202ENST00000570475 ALG13Q9NP73 1137 aaKnown RBP16.38■□□□□ 0.21
USP43-202ENST00000570475 C1orf112Q9NSG2 853 aa16.38■□□□□ 0.21
USP43-202ENST00000570475 RASA4BC9J798 803 aa16.38■□□□□ 0.21
USP43-202ENST00000570475 RIPK2O43353 540 aa16.38■□□□□ 0.21
USP43-202ENST00000570475 RASA4O43374 803 aa16.38■□□□□ 0.21
USP43-202ENST00000570475 C21orf2O43822 256 aa16.38■□□□□ 0.21
USP43-202ENST00000570475 GH1P01241 217 aa16.38■□□□□ 0.21
USP43-202ENST00000570475 CHKAP35790 457 aa16.38■□□□□ 0.21
USP43-202ENST00000570475 PEX19P40855 299 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms