RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 MIOSQ9NXC5 875 aa11.73□□□□□ -0.53
CTDNEP1-202ENST00000570380 BARHL2Q9NY43 387 aa11.73□□□□□ -0.53
CTDNEP1-202ENST00000570380 SEPT9Q9UHD8 586 aaPredicted RBP11.73□□□□□ -0.53
CTDNEP1-202ENST00000570380 V9GY48 417 aaPredicted RBP11.73□□□□□ -0.53
CTDNEP1-202ENST00000570380 ANKRD11Q6UB99 2663 aaPredicted RBP11.73□□□□□ -0.53
CTDNEP1-202ENST00000570380 WDFY3Q8IZQ1 3526 aa11.72□□□□□ -0.53
CTDNEP1-202ENST00000570380 TM4SF5O14894 197 aa11.72□□□□□ -0.53
CTDNEP1-202ENST00000570380 NCLP19338 710 aaKnown RBP11.72□□□□□ -0.53
CTDNEP1-202ENST00000570380 USP41Q3LFD5 358 aa11.72□□□□□ -0.53
CTDNEP1-202ENST00000570380 FUT10Q6P4F1 479 aa11.72□□□□□ -0.53
CTDNEP1-202ENST00000570380 ZNF852Q6ZMS4 543 aa11.72□□□□□ -0.53
CTDNEP1-202ENST00000570380 MAMSTRQ6ZN01 415 aa11.72□□□□□ -0.53
CTDNEP1-202ENST00000570380 GPR65Q8IYL9 337 aa11.72□□□□□ -0.53
CTDNEP1-202ENST00000570380 SMG8Q8ND04 991 aaKnown RBP11.72□□□□□ -0.53
CTDNEP1-202ENST00000570380 NLRP4Q96MN2 994 aa11.72□□□□□ -0.53
CTDNEP1-202ENST00000570380 GAD1Q99259 594 aa11.72□□□□□ -0.53
CTDNEP1-202ENST00000570380 LRRC2Q9BYS8 371 aa11.72□□□□□ -0.53
CTDNEP1-202ENST00000570380 PLA2G2FQ9BZM2 168 aa11.72□□□□□ -0.53
CTDNEP1-202ENST00000570380 GLT8D2Q9H1C3 349 aa11.72□□□□□ -0.53
CTDNEP1-202ENST00000570380 RNF39Q9H2S5 420 aa11.72□□□□□ -0.53
CTDNEP1-202ENST00000570380 CHRDQ9H2X0 955 aa11.72□□□□□ -0.53
CTDNEP1-202ENST00000570380 FBXW11Q9UKB1 542 aa11.72□□□□□ -0.53
CTDNEP1-202ENST00000570380 ARL5CA6NH57 179 aa11.71□□□□□ -0.53
CTDNEP1-202ENST00000570380 CCL16O15467 120 aa11.71□□□□□ -0.53
CTDNEP1-202ENST00000570380 HRO43593 1189 aa11.71□□□□□ -0.53
CTDNEP1-202ENST00000570380 CHMP2AO43633 222 aa11.71□□□□□ -0.53
CTDNEP1-202ENST00000570380 MAFO75444 373 aaPredicted RBP11.71□□□□□ -0.53
CTDNEP1-202ENST00000570380 HNRNPA1P09651 372 aaKnown RBP eCLIP11.71□□□□□ -0.53
CTDNEP1-202ENST00000570380 SIM2Q14190 667 aaPredicted RBP11.71□□□□□ -0.53
CTDNEP1-202ENST00000570380 IL31Q6EBC2 164 aa11.71□□□□□ -0.53
CTDNEP1-202ENST00000570380 PRSS55Q6UWB4 352 aaPredicted RBP11.71□□□□□ -0.53
CTDNEP1-202ENST00000570380 NPAS3Q8IXF0 933 aa11.71□□□□□ -0.53
CTDNEP1-202ENST00000570380 RUFY2Q8WXA3 655 aa11.71□□□□□ -0.53
CTDNEP1-202ENST00000570380 MAP4K1Q92918 833 aa11.71□□□□□ -0.53
CTDNEP1-202ENST00000570380 COLEC11Q9BWP8 271 aa11.71□□□□□ -0.53
CTDNEP1-202ENST00000570380 UNC45AQ9H3U1 944 aa11.71□□□□□ -0.53
CTDNEP1-202ENST00000570380 MINDY3Q9H8M7 445 aa11.71□□□□□ -0.53
CTDNEP1-202ENST00000570380 NDRG2Q9UN36 371 aaKnown RBP11.71□□□□□ -0.53
CTDNEP1-202ENST00000570380 MRPS17Q9Y2R5 130 aaKnown RBP11.71□□□□□ -0.53
CTDNEP1-202ENST00000570380 RBM8AQ9Y5S9 174 aaKnown RBP11.71□□□□□ -0.53
CTDNEP1-202ENST00000570380 hCG_1984214I3L0E3 225 aa11.7□□□□□ -0.54
CTDNEP1-202ENST00000570380 MSH4O15457 936 aa11.7□□□□□ -0.54
CTDNEP1-202ENST00000570380 EDIL3O43854 480 aa11.7□□□□□ -0.54
CTDNEP1-202ENST00000570380 IGHDP01880 384 aa11.7□□□□□ -0.54
CTDNEP1-202ENST00000570380 C8AP07357 584 aa11.7□□□□□ -0.54
CTDNEP1-202ENST00000570380 ITGA4P13612 1032 aa11.7□□□□□ -0.54
CTDNEP1-202ENST00000570380 GSPT1P15170 499 aaKnown RBP11.7□□□□□ -0.54
CTDNEP1-202ENST00000570380 CHMLP26374 656 aa11.7□□□□□ -0.54
CTDNEP1-202ENST00000570380 SFNP31947 248 aa11.7□□□□□ -0.54
CTDNEP1-202ENST00000570380 CIITAP33076 1130 aa11.7□□□□□ -0.54
CTDNEP1-202ENST00000570380 MLH1P40692 756 aa11.7□□□□□ -0.54
CTDNEP1-202ENST00000570380 SCNN1GP51170 649 aa11.7□□□□□ -0.54
CTDNEP1-202ENST00000570380 SRSF5Q13243 272 aaKnown RBP11.7□□□□□ -0.54
CTDNEP1-202ENST00000570380 XKR3Q5GH77 459 aa11.7□□□□□ -0.54
CTDNEP1-202ENST00000570380 RTP2Q5QGT7 225 aa11.7□□□□□ -0.54
CTDNEP1-202ENST00000570380 PPM1LQ5SGD2 360 aa11.7□□□□□ -0.54
CTDNEP1-202ENST00000570380 POTEHQ6S545 545 aa11.7□□□□□ -0.54
CTDNEP1-202ENST00000570380 SGMS1Q86VZ5 419 aa11.7□□□□□ -0.54
CTDNEP1-202ENST00000570380 ZNF713Q8N859 430 aaPredicted RBP11.7□□□□□ -0.54
CTDNEP1-202ENST00000570380 GJA10Q969M2 543 aa11.7□□□□□ -0.54
CTDNEP1-202ENST00000570380 ZFP42Q96MM3 310 aa11.7□□□□□ -0.54
CTDNEP1-202ENST00000570380 UBN1Q9NPG3 1134 aa11.7□□□□□ -0.54
CTDNEP1-202ENST00000570380 HCFC1R1Q9NWW0 138 aa11.7□□□□□ -0.54
CTDNEP1-202ENST00000570380 ZMIZ1Q9ULJ6 1067 aa11.7□□□□□ -0.54
CTDNEP1-202ENST00000570380 POLIQ9UNA4 740 aa11.7□□□□□ -0.54
CTDNEP1-202ENST00000570380 IPPQ9Y573 584 aa11.7□□□□□ -0.54
CTDNEP1-202ENST00000570380 ARID2Q68CP9 1835 aa11.7□□□□□ -0.54
CTDNEP1-202ENST00000570380 SGSM2O43147 1006 aa11.69□□□□□ -0.54
CTDNEP1-202ENST00000570380 GAS7O60861 476 aa11.69□□□□□ -0.54
CTDNEP1-202ENST00000570380 ECI2O75521 394 aa11.69□□□□□ -0.54
CTDNEP1-202ENST00000570380 HOXA9P31269 272 aa11.69□□□□□ -0.54
CTDNEP1-202ENST00000570380 CCR3P51677 355 aa11.69□□□□□ -0.54
CTDNEP1-202ENST00000570380 JAK3P52333 1124 aa11.69□□□□□ -0.54
CTDNEP1-202ENST00000570380 LIMK1P53667 647 aa11.69□□□□□ -0.54
CTDNEP1-202ENST00000570380 SATB1Q01826 763 aa11.69□□□□□ -0.54
CTDNEP1-202ENST00000570380 CREMQ03060 361 aa11.69□□□□□ -0.54
CTDNEP1-202ENST00000570380 PPP2R5DQ14738 602 aa11.69□□□□□ -0.54
CTDNEP1-202ENST00000570380 LIN9Q5TKA1 542 aa11.69□□□□□ -0.54
CTDNEP1-202ENST00000570380 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.69□□□□□ -0.54
CTDNEP1-202ENST00000570380 CNNM3Q8NE01 707 aa11.69□□□□□ -0.54
CTDNEP1-202ENST00000570380 GSTCDQ8NEC7 633 aa11.69□□□□□ -0.54
CTDNEP1-202ENST00000570380 EXOC6Q8TAG9 804 aa11.69□□□□□ -0.54
CTDNEP1-202ENST00000570380 ING5Q8WYH8 240 aa11.69□□□□□ -0.54
CTDNEP1-202ENST00000570380 RABGGTAQ92696 567 aa11.69□□□□□ -0.54
CTDNEP1-202ENST00000570380 SLC5A5Q92911 643 aa11.69□□□□□ -0.54
CTDNEP1-202ENST00000570380 RIT2Q99578 217 aa11.69□□□□□ -0.54
CTDNEP1-202ENST00000570380 CLSTN3Q9BQT9 956 aa11.69□□□□□ -0.54
CTDNEP1-202ENST00000570380 EIF2AQ9BY44 585 aaKnown RBP11.69□□□□□ -0.54
CTDNEP1-202ENST00000570380 RWDD1Q9H446 243 aaPredicted RBP11.69□□□□□ -0.54
CTDNEP1-202ENST00000570380 LMAN1LQ9HAT1 526 aa11.69□□□□□ -0.54
CTDNEP1-202ENST00000570380 RBM28Q9NW13 759 aaKnown RBP11.69□□□□□ -0.54
CTDNEP1-202ENST00000570380 DNMT3BQ9UBC3 853 aaKnown RBP11.69□□□□□ -0.54
CTDNEP1-202ENST00000570380 ADAM28Q9UKQ2 775 aa11.69□□□□□ -0.54
CTDNEP1-202ENST00000570380 HES2Q9Y543 173 aa11.69□□□□□ -0.54
CTDNEP1-202ENST00000570380 COL4A3BPQ9Y5P4 624 aa11.69□□□□□ -0.54
CTDNEP1-202ENST00000570380 LAMA1P25391 3075 aa11.69□□□□□ -0.54
CTDNEP1-202ENST00000570380 IGF2RP11717 2491 aa11.68□□□□□ -0.54
CTDNEP1-202ENST00000570380 DDX11L8A8MPP1 907 aa11.68□□□□□ -0.54
CTDNEP1-202ENST00000570380 C1QTNF9BB2RNN3 333 aa11.68□□□□□ -0.54
CTDNEP1-202ENST00000570380 CHURC1-FNTBB4DL54 471 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms