RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 PBXIP1Q96AQ6 731 aa9.87□□□□□ -0.83
NPLOC4-204ENST00000570324 ZFP42Q96MM3 310 aa9.87□□□□□ -0.83
NPLOC4-204ENST00000570324 BHMT2Q9H2M3 363 aa9.87□□□□□ -0.83
NPLOC4-204ENST00000570324 NXF3Q9H4D5 531 aaKnown RBP9.87□□□□□ -0.83
NPLOC4-204ENST00000570324 DDX19AQ9NUU7 478 aaKnown RBP9.87□□□□□ -0.83
NPLOC4-204ENST00000570324 KLK14Q9P0G3 267 aa9.87□□□□□ -0.83
NPLOC4-204ENST00000570324 DPP7Q9UHL4 492 aa9.87□□□□□ -0.83
NPLOC4-204ENST00000570324 KIAA1024Q9UPX6 916 aa9.87□□□□□ -0.83
NPLOC4-204ENST00000570324 DNM3Q9UQ16 869 aa9.87□□□□□ -0.83
NPLOC4-204ENST00000570324 REV3LO60673 3130 aa9.87□□□□□ -0.83
NPLOC4-204ENST00000570324 TDRD15B5MCY1 1934 aaKnown RBP9.86□□□□□ -0.83
NPLOC4-204ENST00000570324 TMEM221A6NGB7 291 aa9.86□□□□□ -0.83
NPLOC4-204ENST00000570324 M0R296 226 aa9.86□□□□□ -0.83
NPLOC4-204ENST00000570324 LAD1O00515 517 aa9.86□□□□□ -0.83
NPLOC4-204ENST00000570324 B4GALT3O60512 393 aa9.86□□□□□ -0.83
NPLOC4-204ENST00000570324 PRKCBP05771 671 aa9.86□□□□□ -0.83
NPLOC4-204ENST00000570324 WEE2P0C1S8 567 aa9.86□□□□□ -0.83
NPLOC4-204ENST00000570324 U2AF2P26368 475 aaKnown RBP eCLIP9.86□□□□□ -0.83
NPLOC4-204ENST00000570324 GLUD2P49448 558 aa9.86□□□□□ -0.83
NPLOC4-204ENST00000570324 GRIK3Q13003 919 aa9.86□□□□□ -0.83
NPLOC4-204ENST00000570324 ZRSR1Q15695 479 aaKnown RBP9.86□□□□□ -0.83
NPLOC4-204ENST00000570324 TMC5Q6UXY8 1006 aa9.86□□□□□ -0.83
NPLOC4-204ENST00000570324 DTHD1Q6ZMT9 781 aa9.86□□□□□ -0.83
NPLOC4-204ENST00000570324 PPP4R3CPQ6ZMV5 832 aa9.86□□□□□ -0.83
NPLOC4-204ENST00000570324 HFE2Q6ZVN8 426 aa9.86□□□□□ -0.83
NPLOC4-204ENST00000570324 TDRD5Q8NAT2 981 aaKnown RBP9.86□□□□□ -0.83
NPLOC4-204ENST00000570324 SLC22A17Q8WUG5 538 aa9.86□□□□□ -0.83
NPLOC4-204ENST00000570324 KIFAP3Q92845 792 aa9.86□□□□□ -0.83
NPLOC4-204ENST00000570324 ACSF2Q96CM8 615 aaPredicted RBP9.86□□□□□ -0.83
NPLOC4-204ENST00000570324 CDK5RAP3Q96JB5 506 aa9.86□□□□□ -0.83
NPLOC4-204ENST00000570324 FBXL18Q96ME1 805 aa9.86□□□□□ -0.83
NPLOC4-204ENST00000570324 KIF2CQ99661 725 aa9.86□□□□□ -0.83
NPLOC4-204ENST00000570324 HERC2P3Q9BVR0 1158 aa9.86□□□□□ -0.83
NPLOC4-204ENST00000570324 POMKQ9H5K3 350 aa9.86□□□□□ -0.83
NPLOC4-204ENST00000570324 SFXN1Q9H9B4 322 aa9.86□□□□□ -0.83
NPLOC4-204ENST00000570324 MIOSQ9NXC5 875 aa9.86□□□□□ -0.83
NPLOC4-204ENST00000570324 PCDHB6Q9Y5E3 794 aa9.86□□□□□ -0.83
NPLOC4-204ENST00000570324 CCDC169A6NNP5 214 aa9.85□□□□□ -0.83
NPLOC4-204ENST00000570324 K7ERI5 159 aa9.85□□□□□ -0.83
NPLOC4-204ENST00000570324 ACKR2O00590 384 aa9.85□□□□□ -0.83
NPLOC4-204ENST00000570324 INPPL1O15357 1258 aa9.85□□□□□ -0.83
NPLOC4-204ENST00000570324 THP07101 528 aa9.85□□□□□ -0.83
NPLOC4-204ENST00000570324 CNPP09543 421 aaKnown RBP9.85□□□□□ -0.83
NPLOC4-204ENST00000570324 MCM2P49736 904 aa9.85□□□□□ -0.83
NPLOC4-204ENST00000570324 CLCN4P51793 760 aa9.85□□□□□ -0.83
NPLOC4-204ENST00000570324 EFNA5P52803 228 aa9.85□□□□□ -0.83
NPLOC4-204ENST00000570324 CREMQ03060 361 aa9.85□□□□□ -0.83
NPLOC4-204ENST00000570324 DSC1Q08554 894 aa9.85□□□□□ -0.83
NPLOC4-204ENST00000570324 SIGLEC14Q08ET2 396 aa9.85□□□□□ -0.83
NPLOC4-204ENST00000570324 PTPN21Q16825 1174 aa9.85□□□□□ -0.83
NPLOC4-204ENST00000570324 FAM187BQ17R55 369 aa9.85□□□□□ -0.83
NPLOC4-204ENST00000570324 USP41Q3LFD5 358 aa9.85□□□□□ -0.83
NPLOC4-204ENST00000570324 RILPL1Q5EBL4 403 aa9.85□□□□□ -0.83
NPLOC4-204ENST00000570324 CDCA2Q69YH5 1023 aaPredicted RBP9.85□□□□□ -0.83
NPLOC4-204ENST00000570324 KANK3Q6NY19 840 aa9.85□□□□□ -0.83
NPLOC4-204ENST00000570324 CCDC149Q6ZUS6 474 aa9.85□□□□□ -0.83
NPLOC4-204ENST00000570324 PLCD3Q8N3E9 789 aa9.85□□□□□ -0.83
NPLOC4-204ENST00000570324 VN1R3Q9BXE9 311 aa9.85□□□□□ -0.83
NPLOC4-204ENST00000570324 KCNH6Q9H252 994 aa9.85□□□□□ -0.83
NPLOC4-204ENST00000570324 FZD8Q9H461 694 aa9.85□□□□□ -0.83
NPLOC4-204ENST00000570324 POLD4Q9HCU8 107 aa9.85□□□□□ -0.83
NPLOC4-204ENST00000570324 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.85□□□□□ -0.83
NPLOC4-204ENST00000570324 MARCH5Q9NX47 278 aa9.85□□□□□ -0.83
NPLOC4-204ENST00000570324 SNTG2Q9NY99 539 aa9.85□□□□□ -0.83
NPLOC4-204ENST00000570324 CDH22Q9UJ99 828 aa9.85□□□□□ -0.83
NPLOC4-204ENST00000570324 SMC3Q9UQE7 1217 aa9.85□□□□□ -0.83
NPLOC4-204ENST00000570324 C2CD4DB7Z1M9 353 aa9.84□□□□□ -0.83
NPLOC4-204ENST00000570324 E9PMD0 336 aa9.84□□□□□ -0.83
NPLOC4-204ENST00000570324 GLUD1P00367 558 aa9.84□□□□□ -0.83
NPLOC4-204ENST00000570324 GJB2P29033 226 aa9.84□□□□□ -0.83
NPLOC4-204ENST00000570324 PRPHP41219 470 aa9.84□□□□□ -0.83
NPLOC4-204ENST00000570324 TOB1P50616 345 aaPredicted RBP9.84□□□□□ -0.83
NPLOC4-204ENST00000570324 TUSC3Q13454 348 aa9.84□□□□□ -0.83
NPLOC4-204ENST00000570324 MTMR3Q13615 1198 aa9.84□□□□□ -0.83
NPLOC4-204ENST00000570324 HSP90AA2PQ14568 343 aaPredicted RBP9.84□□□□□ -0.83
NPLOC4-204ENST00000570324 ECM1Q16610 540 aa9.84□□□□□ -0.83
NPLOC4-204ENST00000570324 DCAF4L1Q3SXM0 396 aa9.84□□□□□ -0.83
NPLOC4-204ENST00000570324 FUT10Q6P4F1 479 aa9.84□□□□□ -0.83
NPLOC4-204ENST00000570324 OTOP3Q7RTS5 596 aa9.84□□□□□ -0.83
NPLOC4-204ENST00000570324 TAS1R1Q7RTX1 841 aa9.84□□□□□ -0.83
NPLOC4-204ENST00000570324 BMP8AQ7Z5Y6 402 aa9.84□□□□□ -0.83
NPLOC4-204ENST00000570324 GPR149Q86SP6 731 aa9.84□□□□□ -0.83
NPLOC4-204ENST00000570324 CEP57Q86XR8 500 aa9.84□□□□□ -0.83
NPLOC4-204ENST00000570324 PALB2Q86YC2 1186 aa9.84□□□□□ -0.83
NPLOC4-204ENST00000570324 GLYCTKQ8IVS8 523 aa9.84□□□□□ -0.83
NPLOC4-204ENST00000570324 C4orf32Q8N8J7 132 aa9.84□□□□□ -0.83
NPLOC4-204ENST00000570324 IGSF22Q8N9C0 903 aa9.84□□□□□ -0.83
NPLOC4-204ENST00000570324 KREMEN2Q8NCW0 462 aa9.84□□□□□ -0.83
NPLOC4-204ENST00000570324 RIN2Q8WYP3 895 aaPredicted RBP9.84□□□□□ -0.83
NPLOC4-204ENST00000570324 BSNDQ8WZ55 320 aa9.84□□□□□ -0.83
NPLOC4-204ENST00000570324 RABGGTAQ92696 567 aa9.84□□□□□ -0.83
NPLOC4-204ENST00000570324 TMX3Q96JJ7 454 aa9.84□□□□□ -0.83
NPLOC4-204ENST00000570324 TCHPQ9BT92 498 aa9.84□□□□□ -0.83
NPLOC4-204ENST00000570324 PDZD7Q9H5P4 517 aa9.84□□□□□ -0.83
NPLOC4-204ENST00000570324 PIDD1Q9HB75 910 aa9.84□□□□□ -0.83
NPLOC4-204ENST00000570324 MAN1C1Q9NR34 630 aa9.84□□□□□ -0.83
NPLOC4-204ENST00000570324 DAXXQ9UER7 740 aaPredicted RBP9.84□□□□□ -0.83
NPLOC4-204ENST00000570324 ADAM28Q9UKQ2 775 aa9.84□□□□□ -0.83
NPLOC4-204ENST00000570324 SORCS3Q9UPU3 1222 aa9.84□□□□□ -0.83
NPLOC4-204ENST00000570324 GDAQ9Y2T3 454 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms