RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 PLVAPQ9BX97 442 aa23.11■■□□□ 1.29
SHCBP1-205ENST00000566016 HES2Q9Y543 173 aa23.11■■□□□ 1.29
SHCBP1-205ENST00000566016 PRRC2BQ5JSZ5 2229 aaKnown RBP23.1■■□□□ 1.29
SHCBP1-205ENST00000566016 PVALEFA0A1B0GWK0 134 aa23.1■■□□□ 1.29
SHCBP1-205ENST00000566016 MCF2P10911 925 aa23.1■■□□□ 1.29
SHCBP1-205ENST00000566016 EHHADHQ08426 723 aa23.1■■□□□ 1.29
SHCBP1-205ENST00000566016 ZNF568Q3ZCX4 644 aa23.1■■□□□ 1.29
SHCBP1-205ENST00000566016 NOMO2Q5JPE7 1267 aa23.1■■□□□ 1.29
SHCBP1-205ENST00000566016 CLEC17AQ6ZS10 378 aa23.1■■□□□ 1.29
SHCBP1-205ENST00000566016 ARNTL2Q8WYA1 636 aa23.1■■□□□ 1.29
SHCBP1-205ENST00000566016 CDT1Q9H211 546 aa23.1■■□□□ 1.29
SHCBP1-205ENST00000566016 KANSL3Q9P2N6 904 aa23.1■■□□□ 1.29
SHCBP1-205ENST00000566016 CARNS1A5YM72 827 aa23.09■■□□□ 1.29
SHCBP1-205ENST00000566016 HNRNPDLO14979 420 aaKnown RBP23.09■■□□□ 1.29
SHCBP1-205ENST00000566016 ZNF202O95125 648 aa23.09■■□□□ 1.29
SHCBP1-205ENST00000566016 BMPR1AP36894 532 aa23.09■■□□□ 1.29
SHCBP1-205ENST00000566016 AFMP43652 599 aa23.09■■□□□ 1.29
SHCBP1-205ENST00000566016 KRBA2Q6ZNG9 492 aa23.09■■□□□ 1.29
SHCBP1-205ENST00000566016 LRRC55Q6ZSA7 311 aa23.09■■□□□ 1.29
SHCBP1-205ENST00000566016 FMR1NBQ8N0W7 255 aaPredicted RBP23.09■■□□□ 1.29
SHCBP1-205ENST00000566016 FBXO22Q8NEZ5 403 aa23.09■■□□□ 1.29
SHCBP1-205ENST00000566016 URGCPQ8TCY9 931 aa23.09■■□□□ 1.29
SHCBP1-205ENST00000566016 P2RX5Q93086 422 aa23.09■■□□□ 1.29
SHCBP1-205ENST00000566016 CCDC34Q96HJ3 373 aa23.09■■□□□ 1.29
SHCBP1-205ENST00000566016 CDX2Q99626 313 aaPredicted RBP23.09■■□□□ 1.29
SHCBP1-205ENST00000566016 PRDM12Q9H4Q4 367 aa23.09■■□□□ 1.29
SHCBP1-205ENST00000566016 CWH43Q9H720 699 aa23.09■■□□□ 1.29
SHCBP1-205ENST00000566016 AAASQ9NRG9 546 aa23.09■■□□□ 1.29
SHCBP1-205ENST00000566016 TYW1Q9NV66 732 aaKnown RBP23.09■■□□□ 1.29
SHCBP1-205ENST00000566016 PDCD11Q14690 1871 aaKnown RBP23.08■■□□□ 1.29
SHCBP1-205ENST00000566016 EPOPA6NHQ4 379 aa23.08■■□□□ 1.29
SHCBP1-205ENST00000566016 LAG3P18627 525 aa23.08■■□□□ 1.29
SHCBP1-205ENST00000566016 CTNNB1P35222 781 aa23.08■■□□□ 1.29
SHCBP1-205ENST00000566016 FAM160A1Q05DH4 1040 aa23.08■■□□□ 1.29
SHCBP1-205ENST00000566016 MCL1Q07820 350 aa23.08■■□□□ 1.29
SHCBP1-205ENST00000566016 CUL4BQ13620 913 aa23.08■■□□□ 1.29
SHCBP1-205ENST00000566016 NOLC1Q14978 699 aaKnown RBP eCLIP23.08■■□□□ 1.29
SHCBP1-205ENST00000566016 BICD1Q96G01 975 aa23.08■■□□□ 1.29
SHCBP1-205ENST00000566016 C11orf84Q9BUA3 381 aaPredicted RBP23.08■■□□□ 1.29
SHCBP1-205ENST00000566016 RNF39Q9H2S5 420 aa23.08■■□□□ 1.29
SHCBP1-205ENST00000566016 CERS4Q9HA82 394 aa23.08■■□□□ 1.29
SHCBP1-205ENST00000566016 MTUS1Q9ULD2 1270 aa23.08■■□□□ 1.29
SHCBP1-205ENST00000566016 PCDHB13Q9Y5F0 798 aa23.08■■□□□ 1.29
SHCBP1-205ENST00000566016 PLXNA4Q9HCM2 1894 aa23.08■■□□□ 1.28
SHCBP1-205ENST00000566016 COL6A3P12111 3177 aa23.08■■□□□ 1.28
SHCBP1-205ENST00000566016 ARL5CA6NH57 179 aa23.07■■□□□ 1.28
SHCBP1-205ENST00000566016 GCNT3O95395 438 aa23.07■■□□□ 1.28
SHCBP1-205ENST00000566016 GRM5P41594 1212 aa23.07■■□□□ 1.28
SHCBP1-205ENST00000566016 LIG4P49917 911 aa23.07■■□□□ 1.28
SHCBP1-205ENST00000566016 ZC2HC1CQ53FD0 456 aaPredicted RBP23.07■■□□□ 1.28
SHCBP1-205ENST00000566016 KANK3Q6NY19 840 aa23.07■■□□□ 1.28
SHCBP1-205ENST00000566016 STXBP4Q6ZWJ1 553 aa23.07■■□□□ 1.28
SHCBP1-205ENST00000566016 ENGASEQ8NFI3 743 aa23.07■■□□□ 1.28
SHCBP1-205ENST00000566016 BLZF1Q9H2G9 400 aa23.07■■□□□ 1.28
SHCBP1-205ENST00000566016 TBC1D13Q9NVG8 400 aa23.07■■□□□ 1.28
SHCBP1-205ENST00000566016 EYSQ5T1H1 3165 aa23.06■■□□□ 1.28
SHCBP1-205ENST00000566016 H3BNC9 293 aa23.06■■□□□ 1.28
SHCBP1-205ENST00000566016 CLDN3O15551 220 aa23.06■■□□□ 1.28
SHCBP1-205ENST00000566016 GTPBP6O43824 516 aaPredicted RBP23.06■■□□□ 1.28
SHCBP1-205ENST00000566016 POU3F3P20264 500 aaPredicted RBP23.06■■□□□ 1.28
SHCBP1-205ENST00000566016 MLH1P40692 756 aa23.06■■□□□ 1.28
SHCBP1-205ENST00000566016 CASP5P51878 434 aa23.06■■□□□ 1.28
SHCBP1-205ENST00000566016 SNW1Q13573 536 aaKnown RBP23.06■■□□□ 1.28
SHCBP1-205ENST00000566016 FAM26FQ5R3K3 315 aa23.06■■□□□ 1.28
SHCBP1-205ENST00000566016 L1TD1Q5T7N2 865 aaKnown RBP23.06■■□□□ 1.28
SHCBP1-205ENST00000566016 GRAMD1CQ8IYS0 662 aa23.06■■□□□ 1.28
SHCBP1-205ENST00000566016 GAS2L1Q99501 681 aaPredicted RBP23.06■■□□□ 1.28
SHCBP1-205ENST00000566016 TCHPQ9BT92 498 aa23.06■■□□□ 1.28
SHCBP1-205ENST00000566016 ANKFY1Q9P2R3 1169 aa23.06■■□□□ 1.28
SHCBP1-205ENST00000566016 EXOC7Q9UPT5 735 aa23.06■■□□□ 1.28
SHCBP1-205ENST00000566016 INPP5FQ9Y2H2 1132 aa23.06■■□□□ 1.28
SHCBP1-205ENST00000566016 ATG2AQ2TAZ0 1938 aa23.06■■□□□ 1.28
SHCBP1-205ENST00000566016 MYO7AQ13402 2215 aa23.06■■□□□ 1.28
SHCBP1-205ENST00000566016 EIF3DO15371 548 aaKnown RBP eCLIP23.05■■□□□ 1.28
SHCBP1-205ENST00000566016 LPXNO60711 386 aa23.05■■□□□ 1.28
SHCBP1-205ENST00000566016 RECQL4O94761 1208 aa23.05■■□□□ 1.28
SHCBP1-205ENST00000566016 AKAP5P24588 427 aa23.05■■□□□ 1.28
SHCBP1-205ENST00000566016 CASP1P29466 404 aa23.05■■□□□ 1.28
SHCBP1-205ENST00000566016 GAD1Q99259 594 aa23.05■■□□□ 1.28
SHCBP1-205ENST00000566016 APOL6Q9BWW8 343 aa23.05■■□□□ 1.28
SHCBP1-205ENST00000566016 TBC1D7Q9P0N9 293 aa23.05■■□□□ 1.28
SHCBP1-205ENST00000566016 HCSTQ9UBK5 93 aa23.05■■□□□ 1.28
SHCBP1-205ENST00000566016 PCDHB12Q9Y5F1 795 aa23.05■■□□□ 1.28
SHCBP1-205ENST00000566016 KLRC4O43908 158 aa23.05■■□□□ 1.28
SHCBP1-205ENST00000566016 PPM1AP35813 382 aa23.05■■□□□ 1.28
SHCBP1-205ENST00000566016 KYAT1Q16773 422 aa23.05■■□□□ 1.28
SHCBP1-205ENST00000566016 SPOUT1Q5T280 376 aaKnown RBP23.05■■□□□ 1.28
SHCBP1-205ENST00000566016 COLGALT1Q8NBJ5 622 aa23.05■■□□□ 1.28
SHCBP1-205ENST00000566016 GSTCDQ8NEC7 633 aa23.05■■□□□ 1.28
SHCBP1-205ENST00000566016 ZFP42Q96MM3 310 aa23.05■■□□□ 1.28
SHCBP1-205ENST00000566016 TIGD1Q96MW7 591 aa23.05■■□□□ 1.28
SHCBP1-205ENST00000566016 ACCSQ96QU6 501 aa23.05■■□□□ 1.28
SHCBP1-205ENST00000566016 CCDC94Q9BW85 323 aaPredicted RBP23.05■■□□□ 1.28
SHCBP1-205ENST00000566016 FGFBP2Q9BYJ0 223 aa23.05■■□□□ 1.28
SHCBP1-205ENST00000566016 TOPORSQ9NS56 1045 aaPredicted RBP23.05■■□□□ 1.28
SHCBP1-205ENST00000566016 SNTG2Q9NY99 539 aa23.05■■□□□ 1.28
SHCBP1-205ENST00000566016 PARP2Q9UGN5 583 aa23.05■■□□□ 1.28
SHCBP1-205ENST00000566016 STYXL1Q9Y6J8 313 aa23.05■■□□□ 1.28
SHCBP1-205ENST00000566016 UBE4BO95155 1302 aa23.04■■□□□ 1.28
SHCBP1-205ENST00000566016 A0A0B4J269 797 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms