RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 PPM1JQ5JR12 505 aa20.58■□□□□ 0.89
KATNB1-202ENST00000562542 FUT10Q6P4F1 479 aa20.58■□□□□ 0.89
KATNB1-202ENST00000562542 LILRA6Q6PI73 481 aa20.58■□□□□ 0.89
KATNB1-202ENST00000562542 RSPO2Q6UXX9 243 aaPredicted RBP20.58■□□□□ 0.89
KATNB1-202ENST00000562542 TPRG1Q6ZUI0 275 aa20.58■□□□□ 0.89
KATNB1-202ENST00000562542 SMG8Q8ND04 991 aaKnown RBP20.58■□□□□ 0.89
KATNB1-202ENST00000562542 FGF13Q92913 245 aa20.58■□□□□ 0.89
KATNB1-202ENST00000562542 ZFP42Q96MM3 310 aa20.58■□□□□ 0.89
KATNB1-202ENST00000562542 KXD1Q9BQD3 176 aa20.58■□□□□ 0.89
KATNB1-202ENST00000562542 PHF20Q9BVI0 1012 aa20.58■□□□□ 0.89
KATNB1-202ENST00000562542 APOL6Q9BWW8 343 aa20.58■□□□□ 0.89
KATNB1-202ENST00000562542 GPR62Q9BZJ7 368 aa20.58■□□□□ 0.89
KATNB1-202ENST00000562542 MINDY3Q9H8M7 445 aa20.58■□□□□ 0.89
KATNB1-202ENST00000562542 PARD6AQ9NPB6 346 aa20.58■□□□□ 0.89
KATNB1-202ENST00000562542 ANO2Q9NQ90 1003 aa20.58■□□□□ 0.89
KATNB1-202ENST00000562542 IPPQ9Y573 584 aa20.58■□□□□ 0.89
KATNB1-202ENST00000562542 CHD8Q9HCK8 2581 aa20.57■□□□□ 0.88
KATNB1-202ENST00000562542 KCNA4P22459 653 aa20.57■□□□□ 0.88
KATNB1-202ENST00000562542 PPM1LQ5SGD2 360 aa20.57■□□□□ 0.88
KATNB1-202ENST00000562542 RNF20Q5VTR2 975 aa20.57■□□□□ 0.88
KATNB1-202ENST00000562542 ANO5Q75V66 913 aa20.57■□□□□ 0.88
KATNB1-202ENST00000562542 PRPF31Q8WWY3 499 aaKnown RBP20.57■□□□□ 0.88
KATNB1-202ENST00000562542 PSPC1Q8WXF1 523 aaKnown RBP20.57■□□□□ 0.88
KATNB1-202ENST00000562542 TMEM143Q96AN5 459 aa20.57■□□□□ 0.88
KATNB1-202ENST00000562542 CCDC196A0A1B0GTZ2 297 aa20.56■□□□□ 0.88
KATNB1-202ENST00000562542 PSMD10O75832 226 aa20.56■□□□□ 0.88
KATNB1-202ENST00000562542 TGM1P22735 817 aa20.56■□□□□ 0.88
KATNB1-202ENST00000562542 TARSP26639 723 aaKnown RBP20.56■□□□□ 0.88
KATNB1-202ENST00000562542 USP11P51784 963 aa20.56■□□□□ 0.88
KATNB1-202ENST00000562542 FGD1P98174 961 aa20.56■□□□□ 0.88
KATNB1-202ENST00000562542 AKAP17AQ02040 695 aaKnown RBP20.56■□□□□ 0.88
KATNB1-202ENST00000562542 SPEM2Q0P670 501 aa20.56■□□□□ 0.88
KATNB1-202ENST00000562542 LPAL2Q16609 132 aa20.56■□□□□ 0.88
KATNB1-202ENST00000562542 DHX32Q7L7V1 743 aaKnown RBP20.56■□□□□ 0.88
KATNB1-202ENST00000562542 NELL2Q99435 816 aa20.56■□□□□ 0.88
KATNB1-202ENST00000562542 EIF2AQ9BY44 585 aaKnown RBP20.56■□□□□ 0.88
KATNB1-202ENST00000562542 RNF39Q9H2S5 420 aa20.56■□□□□ 0.88
KATNB1-202ENST00000562542 BMP2KQ9NSY1 1161 aaPredicted RBP20.56■□□□□ 0.88
KATNB1-202ENST00000562542 ADAM28Q9UKQ2 775 aa20.56■□□□□ 0.88
KATNB1-202ENST00000562542 HES2Q9Y543 173 aa20.56■□□□□ 0.88
KATNB1-202ENST00000562542 CFAP47Q6ZTR5 3102 aa20.55■□□□□ 0.88
KATNB1-202ENST00000562542 CCL16O15467 120 aa20.55■□□□□ 0.88
KATNB1-202ENST00000562542 XYLBO75191 536 aa20.55■□□□□ 0.88
KATNB1-202ENST00000562542 HNRNPA1P09651 372 aaKnown RBP eCLIP20.55■□□□□ 0.88
KATNB1-202ENST00000562542 PSMC5P62195 406 aa20.55■□□□□ 0.88
KATNB1-202ENST00000562542 EXOSC10Q01780 885 aaKnown RBP20.55■□□□□ 0.88
KATNB1-202ENST00000562542 LAMTOR4Q0VGL1 99 aa20.55■□□□□ 0.88
KATNB1-202ENST00000562542 PRSS55Q6UWB4 352 aaPredicted RBP20.55■□□□□ 0.88
KATNB1-202ENST00000562542 GPR65Q8IYL9 337 aa20.55■□□□□ 0.88
KATNB1-202ENST00000562542 CCDC148Q8NFR7 591 aa20.55■□□□□ 0.88
KATNB1-202ENST00000562542 NETO1Q8TDF5 533 aa20.55■□□□□ 0.88
KATNB1-202ENST00000562542 RABGGTAQ92696 567 aa20.55■□□□□ 0.88
KATNB1-202ENST00000562542 NELL1Q92832 810 aa20.55■□□□□ 0.88
KATNB1-202ENST00000562542 MBOAT7Q96N66 472 aa20.55■□□□□ 0.88
KATNB1-202ENST00000562542 TRIM6Q9C030 488 aaPredicted RBP20.55■□□□□ 0.88
KATNB1-202ENST00000562542 MIOSQ9NXC5 875 aa20.55■□□□□ 0.88
KATNB1-202ENST00000562542 MRPS17Q9Y2R5 130 aaKnown RBP20.55■□□□□ 0.88
KATNB1-202ENST00000562542 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.55■□□□□ 0.88
KATNB1-202ENST00000562542 MTCL1Q9Y4B5 1905 aaKnown RBP20.55■□□□□ 0.88
KATNB1-202ENST00000562542 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.54■□□□□ 0.88
KATNB1-202ENST00000562542 TADA2AO75478 443 aa20.54■□□□□ 0.88
KATNB1-202ENST00000562542 C8AP07357 584 aa20.54■□□□□ 0.88
KATNB1-202ENST00000562542 RCAN1P53805 252 aa20.54■□□□□ 0.88
KATNB1-202ENST00000562542 NPEPPSP55786 919 aa20.54■□□□□ 0.88
KATNB1-202ENST00000562542 NCBP1Q09161 790 aaKnown RBP20.54■□□□□ 0.88
KATNB1-202ENST00000562542 NOTUMQ6P988 496 aa20.54■□□□□ 0.88
KATNB1-202ENST00000562542 ZNF852Q6ZMS4 543 aa20.54■□□□□ 0.88
KATNB1-202ENST00000562542 EXOC8Q8IYI6 725 aa20.54■□□□□ 0.88
KATNB1-202ENST00000562542 HACE1Q8IYU2 909 aa20.54■□□□□ 0.88
KATNB1-202ENST00000562542 RNF149Q8NC42 400 aa20.54■□□□□ 0.88
KATNB1-202ENST00000562542 ITFG1Q8TB96 612 aa20.54■□□□□ 0.88
KATNB1-202ENST00000562542 CLDN23Q96B33 292 aa20.54■□□□□ 0.88
KATNB1-202ENST00000562542 CEP170P1Q96L14 293 aa20.54■□□□□ 0.88
KATNB1-202ENST00000562542 ESYT1Q9BSJ8 1104 aa20.54■□□□□ 0.88
KATNB1-202ENST00000562542 FAM126AQ9BYI3 521 aaPredicted RBP20.54■□□□□ 0.88
KATNB1-202ENST00000562542 PRMT8Q9NR22 394 aaPredicted RBP20.54■□□□□ 0.88
KATNB1-202ENST00000562542 FBXW11Q9UKB1 542 aa20.54■□□□□ 0.88
KATNB1-202ENST00000562542 CHD6Q8TD26 2715 aa20.54■□□□□ 0.88
KATNB1-202ENST00000562542 EDIL3O43854 480 aa20.53■□□□□ 0.88
KATNB1-202ENST00000562542 RPS9P46781 194 aaKnown RBP20.53■□□□□ 0.88
KATNB1-202ENST00000562542 MTAPQ13126 283 aa20.53■□□□□ 0.88
KATNB1-202ENST00000562542 TBCKQ8TEA7 893 aa20.53■□□□□ 0.88
KATNB1-202ENST00000562542 CPB2Q96IY4 423 aa20.53■□□□□ 0.88
KATNB1-202ENST00000562542 SF3B1O75533 1304 aaKnown RBP eCLIP20.53■□□□□ 0.88
KATNB1-202ENST00000562542 USP24Q9UPU5 2620 aa20.52■□□□□ 0.88
KATNB1-202ENST00000562542 SLC30A4O14863 429 aa20.52■□□□□ 0.88
KATNB1-202ENST00000562542 PRPF3O43395 683 aaKnown RBP20.52■□□□□ 0.88
KATNB1-202ENST00000562542 AXLP30530 894 aa20.52■□□□□ 0.88
KATNB1-202ENST00000562542 NRLP54845 237 aa20.52■□□□□ 0.88
KATNB1-202ENST00000562542 PPP2R5DQ14738 602 aa20.52■□□□□ 0.88
KATNB1-202ENST00000562542 Q4G0T1 1027 aa20.52■□□□□ 0.88
KATNB1-202ENST00000562542 RTP2Q5QGT7 225 aa20.52■□□□□ 0.88
KATNB1-202ENST00000562542 LAIR1Q6GTX8 287 aa20.52■□□□□ 0.88
KATNB1-202ENST00000562542 PRR23BQ6ZRT6 265 aa20.52■□□□□ 0.88
KATNB1-202ENST00000562542 CEP57Q86XR8 500 aa20.52■□□□□ 0.88
KATNB1-202ENST00000562542 ING5Q8WYH8 240 aa20.52■□□□□ 0.88
KATNB1-202ENST00000562542 CCDC51Q96ER9 411 aa20.52■□□□□ 0.88
KATNB1-202ENST00000562542 VPS54Q9P1Q0 977 aa20.52■□□□□ 0.88
KATNB1-202ENST00000562542 GIT1Q9Y2X7 761 aa20.52■□□□□ 0.88
KATNB1-202ENST00000562542 TSPAN1O60635 241 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms