RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 CCDC124Q96CT7 223 aaKnown RBP14.29□□□□□ -0.12
TRAF3-208ENST00000560371 PNPLA6Q8IY17 1366 aa14.29□□□□□ -0.12
TRAF3-208ENST00000560371 DNAJC6O75061 913 aa14.29□□□□□ -0.12
TRAF3-208ENST00000560371 SMIM24O75264 130 aa14.29□□□□□ -0.12
TRAF3-208ENST00000560371 IMPG1Q17R60 797 aa14.29□□□□□ -0.12
TRAF3-208ENST00000560371 SMAP1Q8IYB5 467 aaPredicted RBP14.29□□□□□ -0.12
TRAF3-208ENST00000560371 FMR1NBQ8N0W7 255 aaPredicted RBP14.29□□□□□ -0.12
TRAF3-208ENST00000560371 SUN2Q9UH99 717 aa14.29□□□□□ -0.12
TRAF3-208ENST00000560371 CCDC151A5D8V7 595 aa14.29□□□□□ -0.12
TRAF3-208ENST00000560371 H3BRJ5 948 aa14.29□□□□□ -0.12
TRAF3-208ENST00000560371 KRT38O76015 456 aa14.29□□□□□ -0.12
TRAF3-208ENST00000560371 CCT5P48643 541 aa14.29□□□□□ -0.12
TRAF3-208ENST00000560371 IFT88Q13099 833 aa14.29□□□□□ -0.12
TRAF3-208ENST00000560371 EPAS1Q99814 870 aa14.29□□□□□ -0.12
TRAF3-208ENST00000560371 SNX9Q9Y5X1 595 aa14.29□□□□□ -0.12
TRAF3-208ENST00000560371 FOXD4Q12950 439 aaPredicted RBP14.29□□□□□ -0.12
TRAF3-208ENST00000560371 HABP4Q5JVS0 413 aaKnown RBP14.29□□□□□ -0.12
TRAF3-208ENST00000560371 SLC7A5P2Q9GIP4 190 aa14.29□□□□□ -0.12
TRAF3-208ENST00000560371 SRGAP2O75044 1071 aa14.29□□□□□ -0.12
TRAF3-208ENST00000560371 TFRCP02786 760 aaKnown RBP14.29□□□□□ -0.12
TRAF3-208ENST00000560371 CDH6P55285 790 aa14.29□□□□□ -0.12
TRAF3-208ENST00000560371 RMDN1Q96DB5 314 aa14.29□□□□□ -0.12
TRAF3-208ENST00000560371 LSM7Q9UK45 103 aaKnown RBP14.29□□□□□ -0.12
TRAF3-208ENST00000560371 ESRRBO95718 433 aa14.28□□□□□ -0.12
TRAF3-208ENST00000560371 MYBL1P10243 752 aa14.28□□□□□ -0.12
TRAF3-208ENST00000560371 IFNA8P32881 189 aa14.28□□□□□ -0.12
TRAF3-208ENST00000560371 ITPRIPL1Q6GPH6 555 aa14.28□□□□□ -0.12
TRAF3-208ENST00000560371 C18orf8Q96DM3 657 aa14.28□□□□□ -0.12
TRAF3-208ENST00000560371 TRIM54Q9BYV2 358 aa14.28□□□□□ -0.12
TRAF3-208ENST00000560371 G3BP2Q9UN86 482 aaKnown RBP14.28□□□□□ -0.12
TRAF3-208ENST00000560371 NMT1P30419 496 aaKnown RBP14.28□□□□□ -0.12
TRAF3-208ENST00000560371 RHOT1Q8IXI2 618 aa14.28□□□□□ -0.12
TRAF3-208ENST00000560371 SLC38A7Q9NVC3 462 aa14.28□□□□□ -0.12
TRAF3-208ENST00000560371 EHD2Q9NZN4 543 aa14.28□□□□□ -0.12
TRAF3-208ENST00000560371 DFFAO00273 331 aa14.28□□□□□ -0.12
TRAF3-208ENST00000560371 PPFIA2O75334 1257 aa14.28□□□□□ -0.12
TRAF3-208ENST00000560371 CD4P01730 458 aa14.28□□□□□ -0.12
TRAF3-208ENST00000560371 FBXO33Q7Z6M2 555 aa14.28□□□□□ -0.12
TRAF3-208ENST00000560371 DEFB132Q7Z7B7 95 aa14.28□□□□□ -0.12
TRAF3-208ENST00000560371 ZNF512BQ96KM6 892 aaPredicted RBP14.28□□□□□ -0.12
TRAF3-208ENST00000560371 ZNF512Q96ME7 567 aaPredicted RBP14.28□□□□□ -0.12
TRAF3-208ENST00000560371 ZBTB18Q99592 522 aa14.28□□□□□ -0.12
TRAF3-208ENST00000560371 ASAP2O43150 1006 aa14.28□□□□□ -0.12
TRAF3-208ENST00000560371 TMCC1O94876 653 aa14.28□□□□□ -0.12
TRAF3-208ENST00000560371 NTSR2O95665 410 aa14.28□□□□□ -0.12
TRAF3-208ENST00000560371 GUCY1A2P33402 732 aa14.28□□□□□ -0.12
TRAF3-208ENST00000560371 ALS2CLQ60I27 953 aa14.28□□□□□ -0.12
TRAF3-208ENST00000560371 CHST13Q8NET6 341 aa14.28□□□□□ -0.12
TRAF3-208ENST00000560371 GBP5Q96PP8 586 aa14.28□□□□□ -0.12
TRAF3-208ENST00000560371 CCSER1Q9C0I3 900 aa14.28□□□□□ -0.12
TRAF3-208ENST00000560371 GPS1Q13098 491 aa14.28□□□□□ -0.12
TRAF3-208ENST00000560371 NFU1Q9UMS0 254 aa14.28□□□□□ -0.12
TRAF3-208ENST00000560371 PCDHB7Q9Y5E2 793 aa14.28□□□□□ -0.12
TRAF3-208ENST00000560371 COPEO14579 308 aa14.28□□□□□ -0.12
TRAF3-208ENST00000560371 PGBD3Q8N328 593 aa14.28□□□□□ -0.12
TRAF3-208ENST00000560371 INTS2Q9H0H0 1204 aaKnown RBP14.28□□□□□ -0.12
TRAF3-208ENST00000560371 DDX56Q9NY93 547 aaKnown RBP14.28□□□□□ -0.12
TRAF3-208ENST00000560371 HSPA4LO95757 839 aa14.27□□□□□ -0.12
TRAF3-208ENST00000560371 FCGRTP55899 365 aa14.27□□□□□ -0.12
TRAF3-208ENST00000560371 ST8SIA6P61647 398 aa14.27□□□□□ -0.12
TRAF3-208ENST00000560371 CAV1Q03135 178 aa14.27□□□□□ -0.12
TRAF3-208ENST00000560371 POU5F1BQ06416 359 aa14.27□□□□□ -0.12
TRAF3-208ENST00000560371 LAMC2Q13753 1193 aa14.27□□□□□ -0.12
TRAF3-208ENST00000560371 EFCAB12Q6NXP0 572 aa14.27□□□□□ -0.12
TRAF3-208ENST00000560371 KIF20BQ96Q89 1820 aa14.27□□□□□ -0.12
TRAF3-208ENST00000560371 POLRMTO00411 1230 aaKnown RBP14.27□□□□□ -0.12
TRAF3-208ENST00000560371 GTF2A2P52657 109 aa14.27□□□□□ -0.12
TRAF3-208ENST00000560371 EFHBQ8N7U6 833 aa14.27□□□□□ -0.12
TRAF3-208ENST00000560371 IGDCC4Q8TDY8 1250 aa14.27□□□□□ -0.12
TRAF3-208ENST00000560371 RMDN2Q96LZ7 410 aa14.27□□□□□ -0.12
TRAF3-208ENST00000560371 BFARQ9NZS9 450 aa14.27□□□□□ -0.12
TRAF3-208ENST00000560371 TECPR2O15040 1411 aa14.27□□□□□ -0.12
TRAF3-208ENST00000560371 PRR29P0C7W0 189 aa14.27□□□□□ -0.13
TRAF3-208ENST00000560371 ITGA4P13612 1032 aa14.27□□□□□ -0.13
TRAF3-208ENST00000560371 MX2P20592 715 aa14.27□□□□□ -0.13
TRAF3-208ENST00000560371 TSGA10IPQ3SY00 556 aa14.27□□□□□ -0.13
TRAF3-208ENST00000560371 DDX53Q86TM3 631 aaKnown RBP14.27□□□□□ -0.13
TRAF3-208ENST00000560371 WNT8AQ9H1J5 351 aa14.27□□□□□ -0.13
TRAF3-208ENST00000560371 DIP2CQ9Y2E4 1556 aa14.27□□□□□ -0.13
TRAF3-208ENST00000560371 DLC1Q96QB1 1528 aa14.27□□□□□ -0.13
TRAF3-208ENST00000560371 UBA6A0AVT1 1052 aaPredicted RBP14.27□□□□□ -0.13
TRAF3-208ENST00000560371 CYP2C9P11712 490 aa14.27□□□□□ -0.13
TRAF3-208ENST00000560371 OR1G1P47890 313 aa14.27□□□□□ -0.13
TRAF3-208ENST00000560371 HDLBPQ00341 1268 aaKnown RBP14.27□□□□□ -0.13
TRAF3-208ENST00000560371 NCOA4Q13772 614 aa14.27□□□□□ -0.13
TRAF3-208ENST00000560371 LMBRD2Q68DH5 695 aaPredicted RBP14.27□□□□□ -0.13
TRAF3-208ENST00000560371 F5H423 210 aaPredicted RBP14.27□□□□□ -0.13
TRAF3-208ENST00000560371 HBP1O60381 514 aa14.27□□□□□ -0.13
TRAF3-208ENST00000560371 PDGFRBP09619 1106 aa14.27□□□□□ -0.13
TRAF3-208ENST00000560371 SH3KBP1Q96B97 665 aa14.27□□□□□ -0.13
TRAF3-208ENST00000560371 NDFIP2Q9NV92 336 aa14.27□□□□□ -0.13
TRAF3-208ENST00000560371 PDXKO00764 312 aa14.27□□□□□ -0.13
TRAF3-208ENST00000560371 WDR75Q8IWA0 830 aaKnown RBP14.27□□□□□ -0.13
TRAF3-208ENST00000560371 NOVA2Q9UNW9 492 aaKnown RBP14.27□□□□□ -0.13
TRAF3-208ENST00000560371 RRN3P2A6NIE6 340 aa14.26□□□□□ -0.13
TRAF3-208ENST00000560371 PI4K2BG5E9Z4 385 aa14.26□□□□□ -0.13
TRAF3-208ENST00000560371 ROR1Q01973 937 aa14.26□□□□□ -0.13
TRAF3-208ENST00000560371 TTC17Q96AE7 1141 aa14.26□□□□□ -0.13
TRAF3-208ENST00000560371 PCDHB8Q9UN66 801 aa14.26□□□□□ -0.13
TRAF3-208ENST00000560371 PHEXP78562 749 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms