RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 NFIL3Q16649 462 aa13.87□□□□□ -0.19
SYNE2-219ENST00000555323 KYAT1Q16773 422 aa13.87□□□□□ -0.19
SYNE2-219ENST00000555323 TMEM132AQ24JP5 1023 aa13.87□□□□□ -0.19
SYNE2-219ENST00000555323 ZNF568Q3ZCX4 644 aa13.87□□□□□ -0.19
SYNE2-219ENST00000555323 CT47A1Q5JQC4 288 aaPredicted RBP13.87□□□□□ -0.19
SYNE2-219ENST00000555323 CENPPQ6IPU0 288 aa13.87□□□□□ -0.19
SYNE2-219ENST00000555323 NPAS4Q8IUM7 802 aa13.87□□□□□ -0.19
SYNE2-219ENST00000555323 NELFCDQ8IXH7 590 aa13.87□□□□□ -0.19
SYNE2-219ENST00000555323 SMYD4Q8IYR2 804 aaPredicted RBP13.87□□□□□ -0.19
SYNE2-219ENST00000555323 MLKLQ8NB16 471 aa13.87□□□□□ -0.19
SYNE2-219ENST00000555323 GOLGA5Q8TBA6 731 aa13.87□□□□□ -0.19
SYNE2-219ENST00000555323 RSPH1Q8WYR4 309 aa13.87□□□□□ -0.19
SYNE2-219ENST00000555323 DHTKD1Q96HY7 919 aaPredicted RBP13.87□□□□□ -0.19
SYNE2-219ENST00000555323 SLC9A7Q96T83 725 aa13.87□□□□□ -0.19
SYNE2-219ENST00000555323 CDT1Q9H211 546 aa13.87□□□□□ -0.19
SYNE2-219ENST00000555323 IKZF4Q9H2S9 585 aa13.87□□□□□ -0.19
SYNE2-219ENST00000555323 TYW1Q9NV66 732 aaKnown RBP13.87□□□□□ -0.19
SYNE2-219ENST00000555323 MAPK8IP1Q9UQF2 711 aa13.87□□□□□ -0.19
SYNE2-219ENST00000555323 IPPQ9Y573 584 aa13.87□□□□□ -0.19
SYNE2-219ENST00000555323 PCDHB7Q9Y5E2 793 aa13.87□□□□□ -0.19
SYNE2-219ENST00000555323 SLC4A7Q9Y6M7 1214 aa13.87□□□□□ -0.19
SYNE2-219ENST00000555323 TTC3P53804 2025 aa13.86□□□□□ -0.19
SYNE2-219ENST00000555323 PDE4DIPQ5VU43 2346 aa13.86□□□□□ -0.19
SYNE2-219ENST00000555323 A0A1W2PPC1 479 aa13.86□□□□□ -0.19
SYNE2-219ENST00000555323 TISP43B9A030 160 aa13.86□□□□□ -0.19
SYNE2-219ENST00000555323 NPTXRO95502 500 aa13.86□□□□□ -0.19
SYNE2-219ENST00000555323 CD44P16070 742 aaKnown RBP13.86□□□□□ -0.19
SYNE2-219ENST00000555323 GRM5P41594 1212 aa13.86□□□□□ -0.19
SYNE2-219ENST00000555323 NLRP12P59046 1061 aa13.86□□□□□ -0.19
SYNE2-219ENST00000555323 DEFB103AP81534 67 aa13.86□□□□□ -0.19
SYNE2-219ENST00000555323 NOLC1Q14978 699 aaKnown RBP eCLIP13.86□□□□□ -0.19
SYNE2-219ENST00000555323 ZCWPW2Q504Y3 356 aa13.86□□□□□ -0.19
SYNE2-219ENST00000555323 HS2ST1Q7LGA3 356 aa13.86□□□□□ -0.19
SYNE2-219ENST00000555323 SLC9A9Q8IVB4 645 aa13.86□□□□□ -0.19
SYNE2-219ENST00000555323 TDHQ8IZJ6 230 aa13.86□□□□□ -0.19
SYNE2-219ENST00000555323 PGBD4Q96DM1 585 aa13.86□□□□□ -0.19
SYNE2-219ENST00000555323 FBXL18Q96ME1 805 aa13.86□□□□□ -0.19
SYNE2-219ENST00000555323 TRIM6Q9C030 488 aaPredicted RBP13.86□□□□□ -0.19
SYNE2-219ENST00000555323 SEMA6BQ9H3T3 888 aa13.86□□□□□ -0.19
SYNE2-219ENST00000555323 UBN1Q9NPG3 1134 aa13.86□□□□□ -0.19
SYNE2-219ENST00000555323 AGPAT3Q9NRZ7 376 aa13.86□□□□□ -0.19
SYNE2-219ENST00000555323 DMAC2Q9NW81 257 aa13.86□□□□□ -0.19
SYNE2-219ENST00000555323 ZBBXA8MT70 800 aa13.85□□□□□ -0.19
SYNE2-219ENST00000555323 OGTO15294 1046 aa13.85□□□□□ -0.19
SYNE2-219ENST00000555323 INPPL1O15357 1258 aa13.85□□□□□ -0.19
SYNE2-219ENST00000555323 DGKIO75912 1065 aa13.85□□□□□ -0.19
SYNE2-219ENST00000555323 GJB5O95377 273 aa13.85□□□□□ -0.19
SYNE2-219ENST00000555323 LDHAP00338 332 aaKnown RBP13.85□□□□□ -0.19
SYNE2-219ENST00000555323 ADRB2P07550 413 aa13.85□□□□□ -0.19
SYNE2-219ENST00000555323 HTRA4P83105 476 aaPredicted RBP13.85□□□□□ -0.19
SYNE2-219ENST00000555323 STIM1Q13586 685 aa13.85□□□□□ -0.19
SYNE2-219ENST00000555323 EDRF1Q3B7T1 1238 aa13.85□□□□□ -0.19
SYNE2-219ENST00000555323 XKR4Q5GH76 650 aa13.85□□□□□ -0.19
SYNE2-219ENST00000555323 PRPF38BQ5VTL8 546 aaKnown RBP13.85□□□□□ -0.19
SYNE2-219ENST00000555323 ALKAL1Q6UXT8 129 aa13.85□□□□□ -0.19
SYNE2-219ENST00000555323 CHRDL2Q6WN34 429 aa13.85□□□□□ -0.19
SYNE2-219ENST00000555323 AGMOQ6ZNB7 445 aa13.85□□□□□ -0.19
SYNE2-219ENST00000555323 ZBTB33Q86T24 672 aa13.85□□□□□ -0.19
SYNE2-219ENST00000555323 HACE1Q8IYU2 909 aa13.85□□□□□ -0.19
SYNE2-219ENST00000555323 POMGNT1Q8WZA1 660 aa13.85□□□□□ -0.19
SYNE2-219ENST00000555323 ZNF689Q96CS4 500 aaPredicted RBP13.85□□□□□ -0.19
SYNE2-219ENST00000555323 RNPC3Q96LT9 517 aaKnown RBP13.85□□□□□ -0.19
SYNE2-219ENST00000555323 CBWD1Q9BRT8 395 aa13.85□□□□□ -0.19
SYNE2-219ENST00000555323 RNF39Q9H2S5 420 aa13.85□□□□□ -0.19
SYNE2-219ENST00000555323 RNF19AQ9NV58 838 aa13.85□□□□□ -0.19
SYNE2-219ENST00000555323 ANKFY1Q9P2R3 1169 aa13.85□□□□□ -0.19
SYNE2-219ENST00000555323 CPSF3Q9UKF6 684 aaKnown RBP13.85□□□□□ -0.19
SYNE2-219ENST00000555323 AGO2Q9UKV8 859 aaKnown RBP13.85□□□□□ -0.19
SYNE2-219ENST00000555323 GIT1Q9Y2X7 761 aa13.85□□□□□ -0.19
SYNE2-219ENST00000555323 MICAL3Q7RTP6 2002 aa13.85□□□□□ -0.19
SYNE2-219ENST00000555323 PSMA7O14818 248 aa13.84□□□□□ -0.19
SYNE2-219ENST00000555323 HOXA2O43364 376 aa13.84□□□□□ -0.19
SYNE2-219ENST00000555323 CALUO43852 315 aaPredicted RBP13.84□□□□□ -0.19
SYNE2-219ENST00000555323 OFD1O75665 1012 aa13.84□□□□□ -0.19
SYNE2-219ENST00000555323 CLTAP09496 248 aa13.84□□□□□ -0.19
SYNE2-219ENST00000555323 ITGA4P13612 1032 aa13.84□□□□□ -0.19
SYNE2-219ENST00000555323 ATP2A2P16615 1042 aaKnown RBP13.84□□□□□ -0.19
SYNE2-219ENST00000555323 CCNE1P24864 410 aa13.84□□□□□ -0.19
SYNE2-219ENST00000555323 LRRC63Q05C16 580 aa13.84□□□□□ -0.19
SYNE2-219ENST00000555323 ARMCX5Q6P1M9 558 aa13.84□□□□□ -0.19
SYNE2-219ENST00000555323 SASS6Q6UVJ0 657 aa13.84□□□□□ -0.19
SYNE2-219ENST00000555323 CRELD2Q6UXH1 353 aaPredicted RBP13.84□□□□□ -0.19
SYNE2-219ENST00000555323 HERC6Q8IVU3 1022 aa13.84□□□□□ -0.19
SYNE2-219ENST00000555323 ZC3H3Q8IXZ2 948 aaKnown RBP13.84□□□□□ -0.19
SYNE2-219ENST00000555323 CEP120Q8N960 986 aa13.84□□□□□ -0.19
SYNE2-219ENST00000555323 P2RX5Q93086 422 aa13.84□□□□□ -0.19
SYNE2-219ENST00000555323 ACAP3Q96P50 834 aa13.84□□□□□ -0.19
SYNE2-219ENST00000555323 MSTO1Q9BUK6 570 aa13.84□□□□□ -0.19
SYNE2-219ENST00000555323 NXF3Q9H4D5 531 aaKnown RBP13.84□□□□□ -0.19
SYNE2-219ENST00000555323 RC3H2Q9HBD1 1191 aaKnown RBP13.84□□□□□ -0.19
SYNE2-219ENST00000555323 KIAA1586Q9HCI6 787 aa13.84□□□□□ -0.19
SYNE2-219ENST00000555323 SNTG2Q9NY99 539 aa13.84□□□□□ -0.19
SYNE2-219ENST00000555323 LRFN2Q9ULH4 789 aa13.84□□□□□ -0.19
SYNE2-219ENST00000555323 HES2Q9Y543 173 aa13.84□□□□□ -0.19
SYNE2-219ENST00000555323 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.83□□□□□ -0.2
SYNE2-219ENST00000555323 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.83□□□□□ -0.2
SYNE2-219ENST00000555323 MEIS3P2A8K0S8 358 aa13.83□□□□□ -0.2
SYNE2-219ENST00000555323 CLIC2O15247 247 aa13.83□□□□□ -0.2
SYNE2-219ENST00000555323 EXTL3O43909 919 aa13.83□□□□□ -0.2
SYNE2-219ENST00000555323 ERCC5P28715 1186 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms