RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 ZBED1O96006 694 aa6.87□□□□□ -1.31
CKS1BP1-201ENST00000555221 FTLP02792 175 aaPredicted RBP6.87□□□□□ -1.31
CKS1BP1-201ENST00000555221 HRGP04196 525 aa6.87□□□□□ -1.31
CKS1BP1-201ENST00000555221 ALDH2P05091 517 aa6.87□□□□□ -1.31
CKS1BP1-201ENST00000555221 NBPF7P0C2Y1 421 aaPredicted RBP6.87□□□□□ -1.31
CKS1BP1-201ENST00000555221 PHKG2P15735 406 aa6.87□□□□□ -1.31
CKS1BP1-201ENST00000555221 SLC6A9P48067 706 aa6.87□□□□□ -1.31
CKS1BP1-201ENST00000555221 USP14P54578 494 aa6.87□□□□□ -1.31
CKS1BP1-201ENST00000555221 SLURP1P55000 103 aa6.87□□□□□ -1.31
CKS1BP1-201ENST00000555221 GJA9P57773 515 aa6.87□□□□□ -1.31
CKS1BP1-201ENST00000555221 ATP2C1P98194 919 aaPredicted RBP6.87□□□□□ -1.31
CKS1BP1-201ENST00000555221 HGFACQ04756 655 aa6.87□□□□□ -1.31
CKS1BP1-201ENST00000555221 UBE4AQ14139 1066 aa6.87□□□□□ -1.31
CKS1BP1-201ENST00000555221 RAB39AQ14964 217 aa6.87□□□□□ -1.31
CKS1BP1-201ENST00000555221 CCDC157Q569K6 752 aa6.87□□□□□ -1.31
CKS1BP1-201ENST00000555221 BORAQ6PGQ7 559 aa6.87□□□□□ -1.31
CKS1BP1-201ENST00000555221 PDZD4Q76G19 769 aaPredicted RBP6.87□□□□□ -1.31
CKS1BP1-201ENST00000555221 RSPH3Q86UC2 560 aa6.87□□□□□ -1.31
CKS1BP1-201ENST00000555221 ANKRD53Q8N9V6 530 aa6.87□□□□□ -1.31
CKS1BP1-201ENST00000555221 OR14K1Q8NGZ2 314 aa6.87□□□□□ -1.31
CKS1BP1-201ENST00000555221 PPP1R35Q8TAP8 253 aa6.87□□□□□ -1.31
CKS1BP1-201ENST00000555221 CDK5RAP3Q96JB5 506 aa6.87□□□□□ -1.31
CKS1BP1-201ENST00000555221 CGRRF1Q99675 332 aa6.87□□□□□ -1.31
CKS1BP1-201ENST00000555221 DDX21Q9NR30 783 aaKnown RBP eCLIP6.87□□□□□ -1.31
CKS1BP1-201ENST00000555221 STXBP5LQ9Y2K9 1186 aa6.87□□□□□ -1.31
CKS1BP1-201ENST00000555221 NR2E1Q9Y466 385 aa6.87□□□□□ -1.31
CKS1BP1-201ENST00000555221 PMS2P1A4D2B8 440 aa6.86□□□□□ -1.31
CKS1BP1-201ENST00000555221 ITGA10O75578 1167 aa6.86□□□□□ -1.31
CKS1BP1-201ENST00000555221 MYBP10242 640 aa6.86□□□□□ -1.31
CKS1BP1-201ENST00000555221 HTR1BP28222 390 aa6.86□□□□□ -1.31
CKS1BP1-201ENST00000555221 SREBF1P36956 1147 aa6.86□□□□□ -1.31
CKS1BP1-201ENST00000555221 ANO6Q4KMQ2 910 aa6.86□□□□□ -1.31
CKS1BP1-201ENST00000555221 CYB5RLQ6IPT4 315 aa6.86□□□□□ -1.31
CKS1BP1-201ENST00000555221 C3orf20Q8ND61 904 aa6.86□□□□□ -1.31
CKS1BP1-201ENST00000555221 PJA1Q8NG27 643 aa6.86□□□□□ -1.31
CKS1BP1-201ENST00000555221 RABGGTAQ92696 567 aa6.86□□□□□ -1.31
CKS1BP1-201ENST00000555221 CLPTM1LQ96KA5 538 aa6.86□□□□□ -1.31
CKS1BP1-201ENST00000555221 PDCD2LQ9BRP1 358 aa6.86□□□□□ -1.31
CKS1BP1-201ENST00000555221 SENP6Q9GZR1 1112 aaPredicted RBP6.86□□□□□ -1.31
CKS1BP1-201ENST00000555221 ZNF700Q9H0M5 742 aa6.86□□□□□ -1.31
CKS1BP1-201ENST00000555221 MSL2Q9HCI7 577 aa6.86□□□□□ -1.31
CKS1BP1-201ENST00000555221 TMEM140Q9NV12 185 aa6.86□□□□□ -1.31
CKS1BP1-201ENST00000555221 CALCOCO1Q9P1Z2 691 aa6.86□□□□□ -1.31
CKS1BP1-201ENST00000555221 SIK3Q9Y2K2 1263 aa6.86□□□□□ -1.31
CKS1BP1-201ENST00000555221 SLC4A7Q9Y6M7 1214 aa6.86□□□□□ -1.31
CKS1BP1-201ENST00000555221 ANO9A1A5B4 782 aa6.85□□□□□ -1.31
CKS1BP1-201ENST00000555221 TPP1O14773 563 aa6.85□□□□□ -1.31
CKS1BP1-201ENST00000555221 IL2RBP14784 551 aa6.85□□□□□ -1.31
CKS1BP1-201ENST00000555221 RHCEP18577 417 aa6.85□□□□□ -1.31
CKS1BP1-201ENST00000555221 MAP2K6P52564 334 aa6.85□□□□□ -1.31
CKS1BP1-201ENST00000555221 HK3P52790 923 aa6.85□□□□□ -1.31
CKS1BP1-201ENST00000555221 RHDQ02161 417 aa6.85□□□□□ -1.31
CKS1BP1-201ENST00000555221 GALEQ14376 348 aa6.85□□□□□ -1.31
CKS1BP1-201ENST00000555221 SAFBQ15424 915 aaKnown RBP eCLIP6.85□□□□□ -1.31
CKS1BP1-201ENST00000555221 TBR1Q16650 682 aa6.85□□□□□ -1.31
CKS1BP1-201ENST00000555221 VMACQ2NL98 169 aa6.85□□□□□ -1.31
CKS1BP1-201ENST00000555221 COBLL1Q53SF7 1204 aa6.85□□□□□ -1.31
CKS1BP1-201ENST00000555221 PLEKHH3Q7Z736 793 aa6.85□□□□□ -1.31
CKS1BP1-201ENST00000555221 DAAM2Q86T65 1068 aa6.85□□□□□ -1.31
CKS1BP1-201ENST00000555221 ZDHHC14Q8IZN3 488 aa6.85□□□□□ -1.31
CKS1BP1-201ENST00000555221 CCHCR1Q8TD31 782 aa6.85□□□□□ -1.31
CKS1BP1-201ENST00000555221 CASKIN2Q8WXE0 1202 aa6.85□□□□□ -1.31
CKS1BP1-201ENST00000555221 MTFMTQ96DP5 389 aaKnown RBP6.85□□□□□ -1.31
CKS1BP1-201ENST00000555221 FAM167AQ96KS9 214 aa6.85□□□□□ -1.31
CKS1BP1-201ENST00000555221 FMNL2Q96PY5 1086 aa6.85□□□□□ -1.31
CKS1BP1-201ENST00000555221 CDC5LQ99459 802 aaKnown RBP6.85□□□□□ -1.31
CKS1BP1-201ENST00000555221 PUF60Q9UHX1 559 aaKnown RBP6.85□□□□□ -1.31
CKS1BP1-201ENST00000555221 MYBBP1AQ9BQG0 1328 aaKnown RBP6.84□□□□□ -1.31
CKS1BP1-201ENST00000555221 TEX33O43247 280 aa6.84□□□□□ -1.31
CKS1BP1-201ENST00000555221 SLC26A4O43511 780 aa6.84□□□□□ -1.31
CKS1BP1-201ENST00000555221 GPR32O75388 356 aa6.84□□□□□ -1.31
CKS1BP1-201ENST00000555221 KCNC1P48547 511 aa6.84□□□□□ -1.31
CKS1BP1-201ENST00000555221 AGFG1P52594 562 aaKnown RBP6.84□□□□□ -1.31
CKS1BP1-201ENST00000555221 CACNB3P54284 484 aa6.84□□□□□ -1.31
CKS1BP1-201ENST00000555221 FAM193AP78312 1265 aa6.84□□□□□ -1.31
CKS1BP1-201ENST00000555221 TARDBPQ13148 414 aaKnown RBP eCLIP6.84□□□□□ -1.31
CKS1BP1-201ENST00000555221 NOGQ13253 232 aa6.84□□□□□ -1.31
CKS1BP1-201ENST00000555221 PICALMQ13492 652 aa6.84□□□□□ -1.31
CKS1BP1-201ENST00000555221 DARS2Q6PI48 645 aaKnown RBP6.84□□□□□ -1.31
CKS1BP1-201ENST00000555221 GADL1Q6ZQY3 521 aa6.84□□□□□ -1.31
CKS1BP1-201ENST00000555221 CCDC149Q6ZUS6 474 aa6.84□□□□□ -1.31
CKS1BP1-201ENST00000555221 C11orf96Q7Z7L8 435 aa6.84□□□□□ -1.31
CKS1BP1-201ENST00000555221 TRMT2AQ8IZ69 625 aaKnown RBP6.84□□□□□ -1.31
CKS1BP1-201ENST00000555221 KIAA0319LQ8IZA0 1049 aa6.84□□□□□ -1.31
CKS1BP1-201ENST00000555221 CMTM4Q8IZR5 234 aa6.84□□□□□ -1.31
CKS1BP1-201ENST00000555221 LILRA3Q8N6C8 439 aaPredicted RBP6.84□□□□□ -1.31
CKS1BP1-201ENST00000555221 KLHDC4Q8TBB5 520 aa6.84□□□□□ -1.31
CKS1BP1-201ENST00000555221 TMX3Q96JJ7 454 aa6.84□□□□□ -1.31
CKS1BP1-201ENST00000555221 RPL10LQ96L21 214 aaKnown RBP6.84□□□□□ -1.31
CKS1BP1-201ENST00000555221 MRGPRX4Q96LA9 322 aa6.84□□□□□ -1.31
CKS1BP1-201ENST00000555221 SAMD11Q96NU1 681 aa6.84□□□□□ -1.31
CKS1BP1-201ENST00000555221 B3GNT5Q9BYG0 378 aa6.84□□□□□ -1.31
CKS1BP1-201ENST00000555221 USP25Q9UHP3 1055 aa6.84□□□□□ -1.31
CKS1BP1-201ENST00000555221 NR2E3Q9Y5X4 410 aa6.84□□□□□ -1.31
CKS1BP1-201ENST00000555221 CAPN8A6NHC0 703 aa6.83□□□□□ -1.32
CKS1BP1-201ENST00000555221 A6NNZ2 444 aa6.83□□□□□ -1.32
CKS1BP1-201ENST00000555221 NOBOXO60393 691 aa6.83□□□□□ -1.32
CKS1BP1-201ENST00000555221 B4GALT4O60513 344 aa6.83□□□□□ -1.32
CKS1BP1-201ENST00000555221 SYN1P17600 705 aa6.83□□□□□ -1.32
CKS1BP1-201ENST00000555221 GUCY1A2P33402 732 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms