RNA–Protein interactions for RNA: ENST00000552240.6

PRICKLE1-209, Transcript of prickle planar cell polarity protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRICKLE1, Length 3,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-209ENST00000552240 SLC38A10Q9HBR0 1119 aa13.16□□□□□ -0.3
PRICKLE1-209ENST00000552240 NFKBIEO00221 500 aa13.16□□□□□ -0.3
PRICKLE1-209ENST00000552240 NLRP11P59045 1033 aaKnown RBP13.16□□□□□ -0.3
PRICKLE1-209ENST00000552240 IGBP1P78318 339 aa13.16□□□□□ -0.3
PRICKLE1-209ENST00000552240 CETN1Q12798 172 aa13.16□□□□□ -0.3
PRICKLE1-209ENST00000552240 SEMA3FQ13275 785 aa13.16□□□□□ -0.3
PRICKLE1-209ENST00000552240 TMEM132BQ14DG7 1078 aa13.16□□□□□ -0.3
PRICKLE1-209ENST00000552240 R3HDM1Q15032 1099 aaKnown RBP13.16□□□□□ -0.3
PRICKLE1-209ENST00000552240 ANKRD35Q8N283 1001 aa13.16□□□□□ -0.3
PRICKLE1-209ENST00000552240 EPS8L1Q8TE68 723 aa13.16□□□□□ -0.3
PRICKLE1-209ENST00000552240 PICK1Q9NRD5 415 aa13.16□□□□□ -0.3
PRICKLE1-209ENST00000552240 GGA3Q9NZ52 723 aa13.16□□□□□ -0.3
PRICKLE1-209ENST00000552240 DBR1Q9UK59 544 aaKnown RBP13.16□□□□□ -0.3
PRICKLE1-209ENST00000552240 TBX20Q9UMR3 447 aa13.16□□□□□ -0.3
PRICKLE1-209ENST00000552240 UTP11Q9Y3A2 253 aaKnown RBP13.16□□□□□ -0.3
PRICKLE1-209ENST00000552240 OPA1O60313 960 aa13.16□□□□□ -0.3
PRICKLE1-209ENST00000552240 GUCY2CP25092 1073 aa13.16□□□□□ -0.3
PRICKLE1-209ENST00000552240 BMT2Q1RMZ1 405 aa13.16□□□□□ -0.3
PRICKLE1-209ENST00000552240 FBXW10Q5XX13 1052 aa13.16□□□□□ -0.3
PRICKLE1-209ENST00000552240 TTC27Q6P3X3 843 aa13.16□□□□□ -0.3
PRICKLE1-209ENST00000552240 IQCKQ8N0W5 287 aa13.16□□□□□ -0.3
PRICKLE1-209ENST00000552240 IQCDQ96DY2 449 aa13.16□□□□□ -0.3
PRICKLE1-209ENST00000552240 CCDC114Q96M63 670 aa13.16□□□□□ -0.3
PRICKLE1-209ENST00000552240 SEMA4AQ9H3S1 761 aa13.16□□□□□ -0.3
PRICKLE1-209ENST00000552240 CNOT8Q9UFF9 292 aaKnown RBP13.16□□□□□ -0.3
PRICKLE1-209ENST00000552240 RGS17Q9UGC6 210 aaPredicted RBP13.16□□□□□ -0.3
PRICKLE1-209ENST00000552240 ANAPC7Q9UJX3 599 aa13.16□□□□□ -0.3
PRICKLE1-209ENST00000552240 PNMA2Q9UL42 364 aa13.16□□□□□ -0.3
PRICKLE1-209ENST00000552240 TRPC6Q9Y210 931 aa13.16□□□□□ -0.3
PRICKLE1-209ENST00000552240 BZW2Q9Y6E2 419 aaKnown RBP13.16□□□□□ -0.3
PRICKLE1-209ENST00000552240 PTPRJQ12913 1337 aa13.15□□□□□ -0.3
PRICKLE1-209ENST00000552240 SLC16A3O15427 465 aaKnown RBP13.15□□□□□ -0.3
PRICKLE1-209ENST00000552240 CHRNB2P17787 502 aa13.15□□□□□ -0.3
PRICKLE1-209ENST00000552240 LMNB1P20700 586 aa13.15□□□□□ -0.3
PRICKLE1-209ENST00000552240 PRKCEQ02156 737 aa13.15□□□□□ -0.3
PRICKLE1-209ENST00000552240 PPFIA1Q13136 1202 aa13.15□□□□□ -0.3
PRICKLE1-209ENST00000552240 HERPUD2Q9BSE4 406 aa13.15□□□□□ -0.3
PRICKLE1-209ENST00000552240 MRIQ9BWK5 157 aa13.15□□□□□ -0.3
PRICKLE1-209ENST00000552240 NRXN2Q9P2S2 1712 aa13.15□□□□□ -0.3
PRICKLE1-209ENST00000552240 EIF3DO15371 548 aaKnown RBP eCLIP13.15□□□□□ -0.3
PRICKLE1-209ENST00000552240 TUBBP07437 444 aa13.15□□□□□ -0.3
PRICKLE1-209ENST00000552240 POLGP54098 1239 aaPredicted RBP13.15□□□□□ -0.3
PRICKLE1-209ENST00000552240 IFT88Q13099 833 aa13.15□□□□□ -0.3
PRICKLE1-209ENST00000552240 DALRD3Q5D0E6 543 aaKnown RBP13.15□□□□□ -0.3
PRICKLE1-209ENST00000552240 TMEM270Q6UE05 265 aa13.15□□□□□ -0.3
PRICKLE1-209ENST00000552240 NCAPG2Q86XI2 1143 aa13.15□□□□□ -0.3
PRICKLE1-209ENST00000552240 TMEM161BQ8NDZ6 487 aa13.15□□□□□ -0.3
PRICKLE1-209ENST00000552240 SCFD2Q8WU76 684 aa13.15□□□□□ -0.3
PRICKLE1-209ENST00000552240 LRRN4Q8WUT4 740 aa13.15□□□□□ -0.3
PRICKLE1-209ENST00000552240 RNF25Q96BH1 459 aaPredicted RBP13.15□□□□□ -0.3
PRICKLE1-209ENST00000552240 POLR3FQ9H1D9 316 aaPredicted RBP13.15□□□□□ -0.3
PRICKLE1-209ENST00000552240 DMAC2Q9NW81 257 aa13.15□□□□□ -0.3
PRICKLE1-209ENST00000552240 WDR64B1ANS9 1081 aa13.15□□□□□ -0.31
PRICKLE1-209ENST00000552240 MYO1FO00160 1098 aa13.15□□□□□ -0.31
PRICKLE1-209ENST00000552240 CAND2O75155 1236 aa13.15□□□□□ -0.31
PRICKLE1-209ENST00000552240 MYZAPP0CAP1 466 aa13.15□□□□□ -0.31
PRICKLE1-209ENST00000552240 RRM1P23921 792 aa13.15□□□□□ -0.31
PRICKLE1-209ENST00000552240 LIG4P49917 911 aa13.15□□□□□ -0.31
PRICKLE1-209ENST00000552240 ZNF131P52739 623 aa13.15□□□□□ -0.31
PRICKLE1-209ENST00000552240 SMTNP53814 917 aa13.15□□□□□ -0.31
PRICKLE1-209ENST00000552240 SETQ01105 290 aaPredicted RBP13.15□□□□□ -0.31
PRICKLE1-209ENST00000552240 INTS8Q75QN2 995 aaKnown RBP13.15□□□□□ -0.31
PRICKLE1-209ENST00000552240 ZNF564Q8TBZ8 553 aaPredicted RBP13.15□□□□□ -0.31
PRICKLE1-209ENST00000552240 CYFIP2Q96F07 1278 aa13.15□□□□□ -0.31
PRICKLE1-209ENST00000552240 VIPAS39Q9H9C1 493 aa13.15□□□□□ -0.31
PRICKLE1-209ENST00000552240 A1CFQ9NQ94 594 aaKnown RBP13.15□□□□□ -0.31
PRICKLE1-209ENST00000552240 TSKSQ9UJT2 592 aa13.15□□□□□ -0.31
PRICKLE1-209ENST00000552240 TTC7AQ9ULT0 858 aaPredicted RBP13.15□□□□□ -0.31
PRICKLE1-209ENST00000552240 DAAM1Q9Y4D1 1078 aa13.15□□□□□ -0.31
PRICKLE1-209ENST00000552240 DDX3YO15523 660 aaKnown RBP13.14□□□□□ -0.31
PRICKLE1-209ENST00000552240 TCF4P15884 667 aa13.14□□□□□ -0.31
PRICKLE1-209ENST00000552240 PRKCIP41743 596 aa13.14□□□□□ -0.31
PRICKLE1-209ENST00000552240 HSD17B4P51659 736 aa13.14□□□□□ -0.31
PRICKLE1-209ENST00000552240 HIRAP54198 1017 aaPredicted RBP13.14□□□□□ -0.31
PRICKLE1-209ENST00000552240 PSMC5P62195 406 aa13.14□□□□□ -0.31
PRICKLE1-209ENST00000552240 TUBB4BP68371 445 aa13.14□□□□□ -0.31
PRICKLE1-209ENST00000552240 IFI35P80217 286 aaPredicted RBP13.14□□□□□ -0.31
PRICKLE1-209ENST00000552240 ZNF844Q08AG5 666 aa13.14□□□□□ -0.31
PRICKLE1-209ENST00000552240 IFI16Q16666 785 aaKnown RBP13.14□□□□□ -0.31
PRICKLE1-209ENST00000552240 ZC3H3Q8IXZ2 948 aaKnown RBP13.14□□□□□ -0.31
PRICKLE1-209ENST00000552240 FNBP1Q96RU3 617 aa13.14□□□□□ -0.31
PRICKLE1-209ENST00000552240 CEP89Q96ST8 783 aa13.14□□□□□ -0.31
PRICKLE1-209ENST00000552240 RIT2Q99578 217 aa13.14□□□□□ -0.31
PRICKLE1-209ENST00000552240 ODF2LQ9ULJ1 636 aa13.14□□□□□ -0.31
PRICKLE1-209ENST00000552240 EDN1P05305 212 aa13.14□□□□□ -0.31
PRICKLE1-209ENST00000552240 CYP11B1P15538 503 aa13.14□□□□□ -0.31
PRICKLE1-209ENST00000552240 CREB1P16220 341 aa13.14□□□□□ -0.31
PRICKLE1-209ENST00000552240 TNFSF9P41273 254 aa13.14□□□□□ -0.31
PRICKLE1-209ENST00000552240 SLC29A2Q14542 456 aa13.14□□□□□ -0.31
PRICKLE1-209ENST00000552240 NLGN2Q8NFZ4 835 aa13.14□□□□□ -0.31
PRICKLE1-209ENST00000552240 PARD3BQ8TEW8 1205 aa13.14□□□□□ -0.31
PRICKLE1-209ENST00000552240 FMO2Q99518 471 aa13.14□□□□□ -0.31
PRICKLE1-209ENST00000552240 DDX23Q9BUQ8 820 aaKnown RBP13.14□□□□□ -0.31
PRICKLE1-209ENST00000552240 CTNNAL1Q9UBT7 734 aa13.14□□□□□ -0.31
PRICKLE1-209ENST00000552240 FBXO40Q9UH90 709 aa13.14□□□□□ -0.31
PRICKLE1-209ENST00000552240 PCDHA10Q9Y5I2 948 aa13.14□□□□□ -0.31
PRICKLE1-209ENST00000552240 GRIN2DO15399 1336 aa13.14□□□□□ -0.31
PRICKLE1-209ENST00000552240 EBAG9O00559 213 aa13.13□□□□□ -0.31
PRICKLE1-209ENST00000552240 KRT10P13645 584 aa13.13□□□□□ -0.31
PRICKLE1-209ENST00000552240 ACTR2P61160 394 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms