RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.1□□□□□ -0.47
TRAFD1-206ENST00000549358 FAM217BQ9NTX9 383 aaPredicted RBP12.1□□□□□ -0.47
TRAFD1-206ENST00000549358 GMEB2Q9UKD1 530 aa12.1□□□□□ -0.47
TRAFD1-206ENST00000549358 RALYQ9UKM9 306 aaKnown RBP12.1□□□□□ -0.47
TRAFD1-206ENST00000549358 EPG5Q9HCE0 2579 aa12.1□□□□□ -0.47
TRAFD1-206ENST00000549358 ESYT2A0FGR8 921 aa12.09□□□□□ -0.47
TRAFD1-206ENST00000549358 EDIL3O43854 480 aa12.09□□□□□ -0.47
TRAFD1-206ENST00000549358 GNA11P29992 359 aa12.09□□□□□ -0.47
TRAFD1-206ENST00000549358 ADD1P35611 737 aaKnown RBP12.09□□□□□ -0.47
TRAFD1-206ENST00000549358 MLH1P40692 756 aa12.09□□□□□ -0.47
TRAFD1-206ENST00000549358 MAGEA9P43362 315 aa12.09□□□□□ -0.47
TRAFD1-206ENST00000549358 PFKPQ01813 784 aa12.09□□□□□ -0.47
TRAFD1-206ENST00000549358 LPAL2Q16609 132 aa12.09□□□□□ -0.47
TRAFD1-206ENST00000549358 USP41Q3LFD5 358 aa12.09□□□□□ -0.47
TRAFD1-206ENST00000549358 RSPO2Q6UXX9 243 aaPredicted RBP12.09□□□□□ -0.47
TRAFD1-206ENST00000549358 ANO5Q75V66 913 aa12.09□□□□□ -0.47
TRAFD1-206ENST00000549358 MTSS1LQ765P7 747 aa12.09□□□□□ -0.47
TRAFD1-206ENST00000549358 SMG8Q8ND04 991 aaKnown RBP12.09□□□□□ -0.47
TRAFD1-206ENST00000549358 CNNM3Q8NE01 707 aa12.09□□□□□ -0.47
TRAFD1-206ENST00000549358 PRPF31Q8WWY3 499 aaKnown RBP12.09□□□□□ -0.47
TRAFD1-206ENST00000549358 RABGGTAQ92696 567 aa12.09□□□□□ -0.47
TRAFD1-206ENST00000549358 ZFP42Q96MM3 310 aa12.09□□□□□ -0.47
TRAFD1-206ENST00000549358 NELL2Q99435 816 aa12.09□□□□□ -0.47
TRAFD1-206ENST00000549358 KXD1Q9BQD3 176 aa12.09□□□□□ -0.47
TRAFD1-206ENST00000549358 MINDY3Q9H8M7 445 aa12.09□□□□□ -0.47
TRAFD1-206ENST00000549358 MIOSQ9NXC5 875 aa12.09□□□□□ -0.47
TRAFD1-206ENST00000549358 FNIP2Q9P278 1114 aa12.09□□□□□ -0.47
TRAFD1-206ENST00000549358 NAP1L2Q9ULW6 460 aaPredicted RBP12.09□□□□□ -0.47
TRAFD1-206ENST00000549358 POLIQ9UNA4 740 aa12.09□□□□□ -0.47
TRAFD1-206ENST00000549358 HES2Q9Y543 173 aa12.09□□□□□ -0.47
TRAFD1-206ENST00000549358 IPPQ9Y573 584 aa12.09□□□□□ -0.47
TRAFD1-206ENST00000549358 PCDHB13Q9Y5F0 798 aa12.09□□□□□ -0.47
TRAFD1-206ENST00000549358 COL4A3BPQ9Y5P4 624 aa12.09□□□□□ -0.47
TRAFD1-206ENST00000549358 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.09□□□□□ -0.47
TRAFD1-206ENST00000549358 CFAP47Q6ZTR5 3102 aa12.09□□□□□ -0.47
TRAFD1-206ENST00000549358 FANCMQ8IYD8 2048 aa12.09□□□□□ -0.47
TRAFD1-206ENST00000549358 MYH9P35579 1960 aaKnown RBP12.09□□□□□ -0.47
TRAFD1-206ENST00000549358 CACNA1BQ00975 2339 aa12.08□□□□□ -0.48
TRAFD1-206ENST00000549358 OTOGLQ3ZCN5 2332 aa12.08□□□□□ -0.48
TRAFD1-206ENST00000549358 KLF18A0A0U1RQI7 1052 aa12.08□□□□□ -0.48
TRAFD1-206ENST00000549358 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.08□□□□□ -0.48
TRAFD1-206ENST00000549358 TTLL13PA6NNM8 815 aa12.08□□□□□ -0.48
TRAFD1-206ENST00000549358 NCAM2O15394 837 aa12.08□□□□□ -0.48
TRAFD1-206ENST00000549358 SCNN1GP51170 649 aa12.08□□□□□ -0.48
TRAFD1-206ENST00000549358 EXOSC10Q01780 885 aaKnown RBP12.08□□□□□ -0.48
TRAFD1-206ENST00000549358 DSC1Q08554 894 aa12.08□□□□□ -0.48
TRAFD1-206ENST00000549358 PLA2G4FQ68DD2 849 aa12.08□□□□□ -0.48
TRAFD1-206ENST00000549358 FUT10Q6P4F1 479 aa12.08□□□□□ -0.48
TRAFD1-206ENST00000549358 PRSS55Q6UWB4 352 aaPredicted RBP12.08□□□□□ -0.48
TRAFD1-206ENST00000549358 SRGAP1Q7Z6B7 1085 aa12.08□□□□□ -0.48
TRAFD1-206ENST00000549358 CCDC12Q8WUD4 166 aaPredicted RBP12.08□□□□□ -0.48
TRAFD1-206ENST00000549358 TMEM143Q96AN5 459 aa12.08□□□□□ -0.48
TRAFD1-206ENST00000549358 CLDN23Q96B33 292 aa12.08□□□□□ -0.48
TRAFD1-206ENST00000549358 JPH2Q9BR39 696 aaPredicted RBP12.08□□□□□ -0.48
TRAFD1-206ENST00000549358 PHF20Q9BVI0 1012 aa12.08□□□□□ -0.48
TRAFD1-206ENST00000549358 EIF2AQ9BY44 585 aaKnown RBP12.08□□□□□ -0.48
TRAFD1-206ENST00000549358 PSMD10O75832 226 aa12.07□□□□□ -0.48
TRAFD1-206ENST00000549358 TARSP26639 723 aaKnown RBP12.07□□□□□ -0.48
TRAFD1-206ENST00000549358 RPS9P46781 194 aaKnown RBP12.07□□□□□ -0.48
TRAFD1-206ENST00000549358 USP11P51784 963 aa12.07□□□□□ -0.48
TRAFD1-206ENST00000549358 NPEPPSP55786 919 aa12.07□□□□□ -0.48
TRAFD1-206ENST00000549358 CREMQ03060 361 aa12.07□□□□□ -0.48
TRAFD1-206ENST00000549358 MTAPQ13126 283 aa12.07□□□□□ -0.48
TRAFD1-206ENST00000549358 PPM1LQ5SGD2 360 aa12.07□□□□□ -0.48
TRAFD1-206ENST00000549358 MAMSTRQ6ZN01 415 aa12.07□□□□□ -0.48
TRAFD1-206ENST00000549358 TPRG1Q6ZUI0 275 aa12.07□□□□□ -0.48
TRAFD1-206ENST00000549358 RDM1Q8NG50 284 aa12.07□□□□□ -0.48
TRAFD1-206ENST00000549358 ITFG1Q8TB96 612 aa12.07□□□□□ -0.48
TRAFD1-206ENST00000549358 SLC7A3Q8WY07 619 aa12.07□□□□□ -0.48
TRAFD1-206ENST00000549358 MBOAT7Q96N66 472 aa12.07□□□□□ -0.48
TRAFD1-206ENST00000549358 APOL6Q9BWW8 343 aa12.07□□□□□ -0.48
TRAFD1-206ENST00000549358 FAM126AQ9BYI3 521 aaPredicted RBP12.07□□□□□ -0.48
TRAFD1-206ENST00000549358 RAB23Q9ULC3 237 aa12.07□□□□□ -0.48
TRAFD1-206ENST00000549358 SLC30A4O14863 429 aa12.06□□□□□ -0.48
TRAFD1-206ENST00000549358 CCL16O15467 120 aa12.06□□□□□ -0.48
TRAFD1-206ENST00000549358 TADA2AO75478 443 aa12.06□□□□□ -0.48
TRAFD1-206ENST00000549358 ERLIN2O94905 339 aa12.06□□□□□ -0.48
TRAFD1-206ENST00000549358 HNRNPA1P09651 372 aaKnown RBP eCLIP12.06□□□□□ -0.48
TRAFD1-206ENST00000549358 PSMC5P62195 406 aa12.06□□□□□ -0.48
TRAFD1-206ENST00000549358 ADCY1Q08828 1119 aa12.06□□□□□ -0.48
TRAFD1-206ENST00000549358 LAMTOR4Q0VGL1 99 aa12.06□□□□□ -0.48
TRAFD1-206ENST00000549358 FZD5Q13467 585 aa12.06□□□□□ -0.48
TRAFD1-206ENST00000549358 RTP2Q5QGT7 225 aa12.06□□□□□ -0.48
TRAFD1-206ENST00000549358 LIN9Q5TKA1 542 aa12.06□□□□□ -0.48
TRAFD1-206ENST00000549358 ZNF852Q6ZMS4 543 aa12.06□□□□□ -0.48
TRAFD1-206ENST00000549358 DHX32Q7L7V1 743 aaKnown RBP12.06□□□□□ -0.48
TRAFD1-206ENST00000549358 GPR65Q8IYL9 337 aa12.06□□□□□ -0.48
TRAFD1-206ENST00000549358 BICD2Q8TD16 824 aa12.06□□□□□ -0.48
TRAFD1-206ENST00000549358 NETO1Q8TDF5 533 aa12.06□□□□□ -0.48
TRAFD1-206ENST00000549358 PSPC1Q8WXF1 523 aaKnown RBP12.06□□□□□ -0.48
TRAFD1-206ENST00000549358 PRMT8Q9NR22 394 aaPredicted RBP12.06□□□□□ -0.48
TRAFD1-206ENST00000549358 HEBP1Q9NRV9 189 aa12.06□□□□□ -0.48
TRAFD1-206ENST00000549358 FBXW11Q9UKB1 542 aa12.06□□□□□ -0.48
TRAFD1-206ENST00000549358 ADAM28Q9UKQ2 775 aa12.06□□□□□ -0.48
TRAFD1-206ENST00000549358 CEP250Q9BV73 2442 aa12.05□□□□□ -0.48
TRAFD1-206ENST00000549358 TSPAN1O60635 241 aa12.05□□□□□ -0.48
TRAFD1-206ENST00000549358 C8AP07357 584 aa12.05□□□□□ -0.48
TRAFD1-206ENST00000549358 AKAP5P24588 427 aa12.05□□□□□ -0.48
TRAFD1-206ENST00000549358 NRLP54845 237 aa12.05□□□□□ -0.48
TRAFD1-206ENST00000549358 LAIR1Q6GTX8 287 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms