RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 ZCWPW2Q504Y3 356 aa23.06■■□□□ 1.28
CACNB3-210ENST00000548874 TCHPQ9BT92 498 aa23.06■■□□□ 1.28
CACNB3-210ENST00000548874 AGPAT3Q9NRZ7 376 aa23.06■■□□□ 1.28
CACNB3-210ENST00000548874 CGNQ9P2M7 1197 aaKnown RBP23.06■■□□□ 1.28
CACNB3-210ENST00000548874 IPPQ9Y573 584 aa23.06■■□□□ 1.28
CACNB3-210ENST00000548874 ZBBXA8MT70 800 aa23.05■■□□□ 1.28
CACNB3-210ENST00000548874 FAM189A1O60320 539 aa23.05■■□□□ 1.28
CACNB3-210ENST00000548874 HS2ST1Q7LGA3 356 aa23.05■■□□□ 1.28
CACNB3-210ENST00000548874 ZBTB33Q86T24 672 aa23.05■■□□□ 1.28
CACNB3-210ENST00000548874 NPAS4Q8IUM7 802 aa23.05■■□□□ 1.28
CACNB3-210ENST00000548874 C12orf56Q8IXR9 622 aa23.05■■□□□ 1.28
CACNB3-210ENST00000548874 MLKLQ8NB16 471 aa23.05■■□□□ 1.28
CACNB3-210ENST00000548874 TMEM174Q8WUU8 243 aa23.05■■□□□ 1.28
CACNB3-210ENST00000548874 CBWD1Q9BRT8 395 aa23.05■■□□□ 1.28
CACNB3-210ENST00000548874 TRIM6Q9C030 488 aaPredicted RBP23.05■■□□□ 1.28
CACNB3-210ENST00000548874 SEMA6BQ9H3T3 888 aa23.05■■□□□ 1.28
CACNB3-210ENST00000548874 NXF3Q9H4D5 531 aaKnown RBP23.05■■□□□ 1.28
CACNB3-210ENST00000548874 TMEM161AQ9NX61 479 aa23.05■■□□□ 1.28
CACNB3-210ENST00000548874 TRAF3IP3Q9Y228 551 aa23.05■■□□□ 1.28
CACNB3-210ENST00000548874 PTPRSQ13332 1948 aa23.04■■□□□ 1.28
CACNB3-210ENST00000548874 EOMESO95936 686 aa23.04■■□□□ 1.28
CACNB3-210ENST00000548874 GRM5P41594 1212 aa23.04■■□□□ 1.28
CACNB3-210ENST00000548874 STIM1Q13586 685 aa23.04■■□□□ 1.28
CACNB3-210ENST00000548874 DPCR1Q3MIW9 517 aa23.04■■□□□ 1.28
CACNB3-210ENST00000548874 CENPPQ6IPU0 288 aa23.04■■□□□ 1.28
CACNB3-210ENST00000548874 GOLGA5Q8TBA6 731 aa23.04■■□□□ 1.28
CACNB3-210ENST00000548874 TOP1MTQ969P6 601 aa23.04■■□□□ 1.28
CACNB3-210ENST00000548874 DHTKD1Q96HY7 919 aaPredicted RBP23.04■■□□□ 1.28
CACNB3-210ENST00000548874 RNPC3Q96LT9 517 aaKnown RBP23.04■■□□□ 1.28
CACNB3-210ENST00000548874 HES2Q9Y543 173 aa23.04■■□□□ 1.28
CACNB3-210ENST00000548874 SLC4A7Q9Y6M7 1214 aa23.04■■□□□ 1.28
CACNB3-210ENST00000548874 PSMA7O14818 248 aa23.03■■□□□ 1.28
CACNB3-210ENST00000548874 OGTO15294 1046 aa23.03■■□□□ 1.28
CACNB3-210ENST00000548874 LETM1O95202 739 aaPredicted RBP23.03■■□□□ 1.28
CACNB3-210ENST00000548874 HARSP12081 509 aaKnown RBP23.03■■□□□ 1.28
CACNB3-210ENST00000548874 ARMCX5Q6P1M9 558 aa23.03■■□□□ 1.28
CACNB3-210ENST00000548874 CEP120Q8N960 986 aa23.03■■□□□ 1.28
CACNB3-210ENST00000548874 PHOSPHO2Q8TCD6 241 aa23.03■■□□□ 1.28
CACNB3-210ENST00000548874 POMGNT1Q8WZA1 660 aa23.03■■□□□ 1.28
CACNB3-210ENST00000548874 SLC9A7Q96T83 725 aa23.03■■□□□ 1.28
CACNB3-210ENST00000548874 MSTO1Q9BUK6 570 aa23.03■■□□□ 1.28
CACNB3-210ENST00000548874 RNF216Q9NWF9 866 aaPredicted RBP23.03■■□□□ 1.28
CACNB3-210ENST00000548874 AGO2Q9UKV8 859 aaKnown RBP23.03■■□□□ 1.28
CACNB3-210ENST00000548874 MEIS3P2A8K0S8 358 aa23.02■■□□□ 1.28
CACNB3-210ENST00000548874 KIAA0391O15091 583 aaKnown RBP23.02■■□□□ 1.28
CACNB3-210ENST00000548874 STAG3L1P0CL83 205 aa23.02■■□□□ 1.28
CACNB3-210ENST00000548874 CCNE1P24864 410 aa23.02■■□□□ 1.28
CACNB3-210ENST00000548874 MATR3P43243 847 aaKnown RBP eCLIP23.02■■□□□ 1.28
CACNB3-210ENST00000548874 NFIL3Q16649 462 aa23.02■■□□□ 1.28
CACNB3-210ENST00000548874 FOXR2Q6PJQ5 311 aa23.02■■□□□ 1.28
CACNB3-210ENST00000548874 SASS6Q6UVJ0 657 aa23.02■■□□□ 1.28
CACNB3-210ENST00000548874 CHRDL2Q6WN34 429 aa23.02■■□□□ 1.28
CACNB3-210ENST00000548874 AGMOQ6ZNB7 445 aa23.02■■□□□ 1.28
CACNB3-210ENST00000548874 P2RX5Q93086 422 aa23.02■■□□□ 1.28
CACNB3-210ENST00000548874 PGBD4Q96DM1 585 aa23.02■■□□□ 1.28
CACNB3-210ENST00000548874 RNF39Q9H2S5 420 aa23.02■■□□□ 1.28
CACNB3-210ENST00000548874 RNF19AQ9NV58 838 aa23.02■■□□□ 1.28
CACNB3-210ENST00000548874 PCDHB7Q9Y5E2 793 aa23.02■■□□□ 1.28
CACNB3-210ENST00000548874 CLIC2O15247 247 aa23.01■■□□□ 1.27
CACNB3-210ENST00000548874 CALUO43852 315 aaPredicted RBP23.01■■□□□ 1.27
CACNB3-210ENST00000548874 ITGA4P13612 1032 aa23.01■■□□□ 1.27
CACNB3-210ENST00000548874 PMS1P54277 932 aaKnown RBP23.01■■□□□ 1.27
CACNB3-210ENST00000548874 MYBPC2Q14324 1141 aa23.01■■□□□ 1.27
CACNB3-210ENST00000548874 KYAT1Q16773 422 aa23.01■■□□□ 1.27
CACNB3-210ENST00000548874 EDRF1Q3B7T1 1238 aa23.01■■□□□ 1.27
CACNB3-210ENST00000548874 SLC9A9Q8IVB4 645 aa23.01■■□□□ 1.27
CACNB3-210ENST00000548874 THNSL1Q8IYQ7 743 aa23.01■■□□□ 1.27
CACNB3-210ENST00000548874 HACE1Q8IYU2 909 aa23.01■■□□□ 1.27
CACNB3-210ENST00000548874 LPPQ93052 612 aa23.01■■□□□ 1.27
CACNB3-210ENST00000548874 DMAC2Q9NW81 257 aa23.01■■□□□ 1.27
CACNB3-210ENST00000548874 SNTG2Q9NY99 539 aa23.01■■□□□ 1.27
CACNB3-210ENST00000548874 HSPBP1Q9NZL4 362 aa23.01■■□□□ 1.27
CACNB3-210ENST00000548874 LRFN2Q9ULH4 789 aa23.01■■□□□ 1.27
CACNB3-210ENST00000548874 LRRC63Q05C16 580 aa23■■□□□ 1.27
CACNB3-210ENST00000548874 PAK1Q13153 545 aa23■■□□□ 1.27
CACNB3-210ENST00000548874 ZSCAN23Q3MJ62 389 aa23■■□□□ 1.27
CACNB3-210ENST00000548874 SEZ6Q53EL9 994 aa23■■□□□ 1.27
CACNB3-210ENST00000548874 ZBTB41Q5SVQ8 909 aa23■■□□□ 1.27
CACNB3-210ENST00000548874 KLHL10Q6JEL2 608 aa23■■□□□ 1.27
CACNB3-210ENST00000548874 CRELD2Q6UXH1 353 aaPredicted RBP23■■□□□ 1.27
CACNB3-210ENST00000548874 TMCO2Q7Z6W1 182 aaPredicted RBP23■■□□□ 1.27
CACNB3-210ENST00000548874 TMEM192Q8IY95 271 aa23■■□□□ 1.27
CACNB3-210ENST00000548874 TDHQ8IZJ6 230 aa23■■□□□ 1.27
CACNB3-210ENST00000548874 RNF169Q8NCN4 708 aa23■■□□□ 1.27
CACNB3-210ENST00000548874 ZSWIM2Q8NEG5 633 aa23■■□□□ 1.27
CACNB3-210ENST00000548874 NELFBQ8WX92 580 aa23■■□□□ 1.27
CACNB3-210ENST00000548874 FBXL18Q96ME1 805 aa23■■□□□ 1.27
CACNB3-210ENST00000548874 FUCA2Q9BTY2 467 aa23■■□□□ 1.27
CACNB3-210ENST00000548874 CCDC94Q9BW85 323 aaPredicted RBP23■■□□□ 1.27
CACNB3-210ENST00000548874 PCIF1Q9H4Z3 704 aa23■■□□□ 1.27
CACNB3-210ENST00000548874 ANO10Q9NW15 660 aa23■■□□□ 1.27
CACNB3-210ENST00000548874 CPSF3Q9UKF6 684 aaKnown RBP23■■□□□ 1.27
CACNB3-210ENST00000548874 CTNND2Q9UQB3 1225 aa23■■□□□ 1.27
CACNB3-210ENST00000548874 COL4A6Q14031 1691 aa23■■□□□ 1.27
CACNB3-210ENST00000548874 SYCE3A1L190 88 aa22.99■■□□□ 1.27
CACNB3-210ENST00000548874 TRIM49BA6NDI0 452 aa22.99■■□□□ 1.27
CACNB3-210ENST00000548874 INPPL1O15357 1258 aa22.99■■□□□ 1.27
CACNB3-210ENST00000548874 EXTL3O43909 919 aa22.99■■□□□ 1.27
CACNB3-210ENST00000548874 DGKIO75912 1065 aa22.99■■□□□ 1.27
CACNB3-210ENST00000548874 RECQL4O94761 1208 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms