RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 ATP6V0A4Q9HBG4 840 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 SLC40A1Q9NP59 571 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 FLRT1Q9NZU1 646 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 ARHGAP20Q9P2F6 1191 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 PCDHA4Q9UN74 947 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 GDAQ9Y2T3 454 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 PCDHGC5Q9Y5F6 944 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 DNAH12Q6ZR08 3092 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 ROBO3Q96MS0 1386 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 SIPA1L1O43166 1804 aa8.31□□□□□ -1.08
CCDC60-204ENST00000539847 A0A1B0GUA9 196 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 MACROD2A1Z1Q3 448 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 CCDC188H7C350 402 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 AKR1B10O60218 316 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 MGRN1O60291 552 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 FAM13AO94988 1023 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 GNA14O95837 355 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 SERPING1P05155 500 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 NPR3P17342 541 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 SMARCA1P28370 1054 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 PMS1P54277 932 aaKnown RBP8.3□□□□□ -1.08
CCDC60-204ENST00000539847 COG2Q14746 738 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 CLUL1Q15846 466 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 KIAA0753Q2KHM9 967 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 ABCB5Q2M3G0 1257 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 SBK1Q52WX2 424 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 CEP85LQ5SZL2 805 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 MEI1Q5TIA1 1274 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 ANKRD40Q6AI12 368 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 RCSD1Q6JBY9 416 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 PDXDC1Q6P996 788 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 SLC39A5Q6ZMH5 540 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 TMC7Q7Z402 723 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 CCDC13Q8IYE1 715 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 FUKQ8N0W3 1084 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 MAFAQ8NHW3 353 aaPredicted RBP8.3□□□□□ -1.08
CCDC60-204ENST00000539847 ACTRT1Q8TDG2 376 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 SCFD2Q8WU76 684 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 SEC14L1Q92503 715 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 CNOT6LQ96LI5 555 aaKnown RBP8.3□□□□□ -1.08
CCDC60-204ENST00000539847 CCDC114Q96M63 670 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 CCDC43Q96MW1 224 aaKnown RBP8.3□□□□□ -1.08
CCDC60-204ENST00000539847 CDX2Q99626 313 aaPredicted RBP8.3□□□□□ -1.08
CCDC60-204ENST00000539847 JPH2Q9BR39 696 aaPredicted RBP8.3□□□□□ -1.08
CCDC60-204ENST00000539847 TRIM9Q9C026 710 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 NDST4Q9H3R1 872 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 SEMA6BQ9H3T3 888 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 INCENPQ9NQS7 918 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 TMPRSS4Q9NRS4 437 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 TCP11L1Q9NUJ3 509 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 SLC12A6Q9UHW9 1150 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 ODF2LQ9ULJ1 636 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.3□□□□□ -1.08
CCDC60-204ENST00000539847 SAMM50Q9Y512 469 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 NFS1Q9Y697 457 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 BZW2Q9Y6E2 419 aaKnown RBP8.3□□□□□ -1.08
CCDC60-204ENST00000539847 DUSP10Q9Y6W6 482 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 ZNF236Q9UL36 1845 aa8.3□□□□□ -1.08
CCDC60-204ENST00000539847 CNTNAP5Q8WYK1 1306 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 FOCADQ5VW36 1801 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 CFAP73A6NFT4 308 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 MYO1FO00160 1098 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 PPP1R12AO14974 1030 aaPredicted RBP8.29□□□□□ -1.08
CCDC60-204ENST00000539847 ASAP2O43150 1006 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 PEX10O60683 326 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 HEXIM1O94992 359 aaKnown RBP8.29□□□□□ -1.08
CCDC60-204ENST00000539847 MOCS3O95396 460 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 GLI1P08151 1106 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 CYP7A1P22680 504 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 IGFBP4P22692 258 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 ADORA2AP29274 412 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 CNGA1P29973 690 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 SHMT1P34896 483 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 CARSP49589 748 aaKnown RBP8.29□□□□□ -1.08
CCDC60-204ENST00000539847 WNT7BP56706 349 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 SATB1Q01826 763 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 CYP27A1Q02318 531 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 GABPAQ06546 454 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 IFT88Q13099 833 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 RRP12Q5JTH9 1297 aaKnown RBP8.29□□□□□ -1.08
CCDC60-204ENST00000539847 PPP1R18Q6NYC8 613 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 TLDC1Q6P9B6 456 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 PIK3AP1Q6ZUJ8 805 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 DPP9Q86TI2 863 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 DGKHQ86XP1 1220 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 LCORLQ8N3X6 602 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 SRBD1Q8N5C6 995 aaKnown RBP8.29□□□□□ -1.08
CCDC60-204ENST00000539847 NPLOC4Q8TAT6 608 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 LMBR1Q8WVP7 490 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 RRP36Q96EU6 259 aaKnown RBP8.29□□□□□ -1.08
CCDC60-204ENST00000539847 CYFIP2Q96F07 1278 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 INPP4AQ96PE3 977 aaPredicted RBP8.29□□□□□ -1.08
CCDC60-204ENST00000539847 SPATC1LQ9H0A9 340 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 SLITRK6Q9H5Y7 841 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 RPAP3Q9H6T3 665 aaPredicted RBP8.29□□□□□ -1.08
CCDC60-204ENST00000539847 EPB41L5Q9HCM4 733 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 RBM12Q9NTZ6 932 aaKnown RBP8.29□□□□□ -1.08
CCDC60-204ENST00000539847 ZNF358Q9NW07 568 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 AIPL1Q9NZN9 384 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 BTBD7Q9P203 1132 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms