RNA–Protein interactions for RNA: ENST00000533656.1

VPS51-212, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 923 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-212ENST00000533656 MORC3Q14149 939 aa23.86■■□□□ 1.41
VPS51-212ENST00000533656 NFKBIBQ15653 356 aa23.86■■□□□ 1.41
VPS51-212ENST00000533656 KYAT1Q16773 422 aa23.86■■□□□ 1.41
VPS51-212ENST00000533656 KNOP1Q1ED39 458 aaKnown RBP23.86■■□□□ 1.41
VPS51-212ENST00000533656 ZNF568Q3ZCX4 644 aa23.86■■□□□ 1.41
VPS51-212ENST00000533656 UBXN11Q5T124 520 aa23.86■■□□□ 1.41
VPS51-212ENST00000533656 NPAS4Q8IUM7 802 aa23.86■■□□□ 1.41
VPS51-212ENST00000533656 GLIS3Q8NEA6 775 aa23.86■■□□□ 1.41
VPS51-212ENST00000533656 PGBD4Q96DM1 585 aa23.86■■□□□ 1.41
VPS51-212ENST00000533656 GBP3Q9H0R5 595 aa23.86■■□□□ 1.41
VPS51-212ENST00000533656 MYO9BQ13459 2157 aa23.86■■□□□ 1.41
VPS51-212ENST00000533656 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.85■■□□□ 1.41
VPS51-212ENST00000533656 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.85■■□□□ 1.41
VPS51-212ENST00000533656 KIAA0391O15091 583 aaKnown RBP23.85■■□□□ 1.41
VPS51-212ENST00000533656 CLDN3O15551 220 aa23.85■■□□□ 1.41
VPS51-212ENST00000533656 MCL1Q07820 350 aa23.85■■□□□ 1.41
VPS51-212ENST00000533656 NOLC1Q14978 699 aaKnown RBP eCLIP23.85■■□□□ 1.41
VPS51-212ENST00000533656 HS2ST1Q7LGA3 356 aa23.85■■□□□ 1.41
VPS51-212ENST00000533656 ECHDC2Q86YB7 292 aa23.85■■□□□ 1.41
VPS51-212ENST00000533656 TCHPQ9BT92 498 aa23.85■■□□□ 1.41
VPS51-212ENST00000533656 TMEM161AQ9NX61 479 aa23.85■■□□□ 1.41
VPS51-212ENST00000533656 CXXC1Q9P0U4 656 aaPredicted RBP23.85■■□□□ 1.41
VPS51-212ENST00000533656 GDAQ9Y2T3 454 aa23.85■■□□□ 1.41
VPS51-212ENST00000533656 PCDHB2Q9Y5E7 798 aa23.85■■□□□ 1.41
VPS51-212ENST00000533656 STYXL1Q9Y6J8 313 aa23.85■■□□□ 1.41
VPS51-212ENST00000533656 ZMYM2Q9UBW7 1377 aa23.84■■□□□ 1.41
VPS51-212ENST00000533656 HOXA2O43364 376 aa23.84■■□□□ 1.41
VPS51-212ENST00000533656 NPTXRO95502 500 aa23.84■■□□□ 1.41
VPS51-212ENST00000533656 GARTP22102 1010 aa23.84■■□□□ 1.41
VPS51-212ENST00000533656 KCNA1Q09470 495 aa23.84■■□□□ 1.41
VPS51-212ENST00000533656 HSP90AA2PQ14568 343 aaPredicted RBP23.84■■□□□ 1.41
VPS51-212ENST00000533656 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.84■■□□□ 1.41
VPS51-212ENST00000533656 MRPL10Q7Z7H8 261 aaKnown RBP23.84■■□□□ 1.41
VPS51-212ENST00000533656 TOP1MTQ969P6 601 aa23.84■■□□□ 1.41
VPS51-212ENST00000533656 CDT1Q9H211 546 aa23.84■■□□□ 1.41
VPS51-212ENST00000533656 UBN1Q9NPG3 1134 aa23.84■■□□□ 1.41
VPS51-212ENST00000533656 ANKFY1Q9P2R3 1169 aa23.84■■□□□ 1.41
VPS51-212ENST00000533656 TMEM265A0A087WTH1 108 aa23.83■■□□□ 1.41
VPS51-212ENST00000533656 ABLIM1O14639 778 aa23.83■■□□□ 1.41
VPS51-212ENST00000533656 MATR3P43243 847 aaKnown RBP eCLIP23.83■■□□□ 1.41
VPS51-212ENST00000533656 GRIN2CQ14957 1233 aa23.83■■□□□ 1.41
VPS51-212ENST00000533656 EEF1DP3Q658K8 133 aa23.83■■□□□ 1.41
VPS51-212ENST00000533656 MAFAQ8NHW3 353 aaPredicted RBP23.83■■□□□ 1.41
VPS51-212ENST00000533656 EIF2AQ9BY44 585 aaKnown RBP23.83■■□□□ 1.41
VPS51-212ENST00000533656 PBX4Q9BYU1 374 aa23.83■■□□□ 1.41
VPS51-212ENST00000533656 TYW1Q9NV66 732 aaKnown RBP23.83■■□□□ 1.41
VPS51-212ENST00000533656 TMEM63CQ9P1W3 806 aa23.83■■□□□ 1.41
VPS51-212ENST00000533656 LRFN2Q9ULH4 789 aa23.83■■□□□ 1.41
VPS51-212ENST00000533656 USP20Q9Y2K6 914 aa23.83■■□□□ 1.41
VPS51-212ENST00000533656 PCDHB7Q9Y5E2 793 aa23.83■■□□□ 1.41
VPS51-212ENST00000533656 MICAL3Q7RTP6 2002 aa23.83■■□□□ 1.4
VPS51-212ENST00000533656 A0A0B4J269 797 aa23.82■■□□□ 1.4
VPS51-212ENST00000533656 PDXKO00764 312 aa23.82■■□□□ 1.4
VPS51-212ENST00000533656 LETM1O95202 739 aaPredicted RBP23.82■■□□□ 1.4
VPS51-212ENST00000533656 HOXD13P35453 343 aa23.82■■□□□ 1.4
VPS51-212ENST00000533656 CAVIN1Q6NZI2 390 aaKnown RBP23.82■■□□□ 1.4
VPS51-212ENST00000533656 SLC39A4Q6P5W5 647 aa23.82■■□□□ 1.4
VPS51-212ENST00000533656 ZNF598Q86UK7 904 aaKnown RBP23.82■■□□□ 1.4
VPS51-212ENST00000533656 CDR2LQ86X02 465 aaPredicted RBP23.82■■□□□ 1.4
VPS51-212ENST00000533656 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.82■■□□□ 1.4
VPS51-212ENST00000533656 NELFCDQ8IXH7 590 aa23.82■■□□□ 1.4
VPS51-212ENST00000533656 TIFAQ96CG3 184 aa23.82■■□□□ 1.4
VPS51-212ENST00000533656 IPPQ9Y573 584 aa23.82■■□□□ 1.4
VPS51-212ENST00000533656 ANKRD63C9JTQ0 380 aa23.81■■□□□ 1.4
VPS51-212ENST00000533656 BIN1O00499 593 aa23.81■■□□□ 1.4
VPS51-212ENST00000533656 FOSL2P15408 326 aa23.81■■□□□ 1.4
VPS51-212ENST00000533656 ATP2A2P16615 1042 aaKnown RBP23.81■■□□□ 1.4
VPS51-212ENST00000533656 GRM5P41594 1212 aa23.81■■□□□ 1.4
VPS51-212ENST00000533656 DEFB103AP81534 67 aa23.81■■□□□ 1.4
VPS51-212ENST00000533656 C12orf56Q8IXR9 622 aa23.81■■□□□ 1.4
VPS51-212ENST00000533656 ADSSL1Q8N142 457 aa23.81■■□□□ 1.4
VPS51-212ENST00000533656 CRIPAKQ8N1N5 446 aa23.81■■□□□ 1.4
VPS51-212ENST00000533656 SMG8Q8ND04 991 aaKnown RBP23.81■■□□□ 1.4
VPS51-212ENST00000533656 TMEM174Q8WUU8 243 aa23.81■■□□□ 1.4
VPS51-212ENST00000533656 POMGNT1Q8WZA1 660 aa23.81■■□□□ 1.4
VPS51-212ENST00000533656 MSTO1Q9BUK6 570 aa23.81■■□□□ 1.4
VPS51-212ENST00000533656 KCTD10Q9H3F6 313 aa23.81■■□□□ 1.4
VPS51-212ENST00000533656 PTPRSQ13332 1948 aa23.8■■□□□ 1.4
VPS51-212ENST00000533656 PSMA7O14818 248 aa23.8■■□□□ 1.4
VPS51-212ENST00000533656 OGTO15294 1046 aa23.8■■□□□ 1.4
VPS51-212ENST00000533656 CALUO43852 315 aaPredicted RBP23.8■■□□□ 1.4
VPS51-212ENST00000533656 LDHAP00338 332 aaKnown RBP23.8■■□□□ 1.4
VPS51-212ENST00000533656 ITGA4P13612 1032 aa23.8■■□□□ 1.4
VPS51-212ENST00000533656 PRCPP42785 496 aa23.8■■□□□ 1.4
VPS51-212ENST00000533656 POU5F1Q01860 360 aaKnown RBP23.8■■□□□ 1.4
VPS51-212ENST00000533656 ARMCX5Q6P1M9 558 aa23.8■■□□□ 1.4
VPS51-212ENST00000533656 SMYD4Q8IYR2 804 aaPredicted RBP23.8■■□□□ 1.4
VPS51-212ENST00000533656 MLKLQ8NB16 471 aa23.8■■□□□ 1.4
VPS51-212ENST00000533656 DHTKD1Q96HY7 919 aaPredicted RBP23.8■■□□□ 1.4
VPS51-212ENST00000533656 ZBTB45Q96K62 511 aaPredicted RBP23.8■■□□□ 1.4
VPS51-212ENST00000533656 CCDC94Q9BW85 323 aaPredicted RBP23.8■■□□□ 1.4
VPS51-212ENST00000533656 AGPAT3Q9NRZ7 376 aa23.8■■□□□ 1.4
VPS51-212ENST00000533656 DACH1Q9UI36 760 aa23.8■■□□□ 1.4
VPS51-212ENST00000533656 TRAF3IP3Q9Y228 551 aa23.8■■□□□ 1.4
VPS51-212ENST00000533656 GIT1Q9Y2X7 761 aa23.8■■□□□ 1.4
VPS51-212ENST00000533656 RBAK-RBAKDNI3L0D1 243 aa23.79■■□□□ 1.4
VPS51-212ENST00000533656 TGFB1I1O43294 461 aa23.79■■□□□ 1.4
VPS51-212ENST00000533656 GJB5O95377 273 aa23.79■■□□□ 1.4
VPS51-212ENST00000533656 ATF7P17544 494 aaPredicted RBP23.79■■□□□ 1.4
VPS51-212ENST00000533656 ADSSP30520 456 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms