RNA–Protein interactions for RNA: ENST00000531504.5

HIPK3-205, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 2

Gene HIPK3, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-205ENST00000531504 GJA10Q969M2 543 aa22.13■■□□□ 1.13
HIPK3-205ENST00000531504 CCDC51Q96ER9 411 aa22.13■■□□□ 1.13
HIPK3-205ENST00000531504 GAD1Q99259 594 aa22.13■■□□□ 1.13
HIPK3-205ENST00000531504 C22orf23Q9BZE7 217 aa22.13■■□□□ 1.13
HIPK3-205ENST00000531504 USP18Q9UMW8 372 aa22.13■■□□□ 1.13
HIPK3-205ENST00000531504 PPME1Q9Y570 386 aa22.13■■□□□ 1.13
HIPK3-205ENST00000531504 IPPQ9Y573 584 aa22.13■■□□□ 1.13
HIPK3-205ENST00000531504 FAM170BA6NMN3 283 aa22.12■■□□□ 1.13
HIPK3-205ENST00000531504 DKC1O60832 514 aaKnown RBP eCLIP22.12■■□□□ 1.13
HIPK3-205ENST00000531504 HNRNPA1P09651 372 aaKnown RBP eCLIP22.12■■□□□ 1.13
HIPK3-205ENST00000531504 PCBP1Q15365 356 aaKnown RBP eCLIP22.12■■□□□ 1.132e-7■■■■■ 44.3
HIPK3-205ENST00000531504 ST3GAL2Q16842 350 aa22.12■■□□□ 1.13
HIPK3-205ENST00000531504 SLC44A4Q53GD3 710 aa22.12■■□□□ 1.13
HIPK3-205ENST00000531504 LIN9Q5TKA1 542 aa22.12■■□□□ 1.13
HIPK3-205ENST00000531504 PLA2G4FQ68DD2 849 aa22.12■■□□□ 1.13
HIPK3-205ENST00000531504 B3GNT9Q6UX72 402 aa22.12■■□□□ 1.13
HIPK3-205ENST00000531504 HACE1Q8IYU2 909 aa22.12■■□□□ 1.13
HIPK3-205ENST00000531504 ST13P5Q8NFI4 369 aaPredicted RBP22.12■■□□□ 1.13
HIPK3-205ENST00000531504 PRPF31Q8WWY3 499 aaKnown RBP22.12■■□□□ 1.13
HIPK3-205ENST00000531504 MBOAT7Q96N66 472 aa22.12■■□□□ 1.13
HIPK3-205ENST00000531504 RPP25Q9BUL9 199 aaKnown RBP22.12■■□□□ 1.13
HIPK3-205ENST00000531504 MINDY3Q9H8M7 445 aa22.12■■□□□ 1.13
HIPK3-205ENST00000531504 LTB4R2Q9NPC1 389 aa22.12■■□□□ 1.13
HIPK3-205ENST00000531504 GMEB2Q9UKD1 530 aa22.12■■□□□ 1.13
HIPK3-205ENST00000531504 NCAM2O15394 837 aa22.11■■□□□ 1.13
HIPK3-205ENST00000531504 TBC1D4O60343 1298 aa22.11■■□□□ 1.13
HIPK3-205ENST00000531504 HMGB1P09429 215 aaKnown RBP22.11■■□□□ 1.13
HIPK3-205ENST00000531504 AXLP30530 894 aa22.11■■□□□ 1.13
HIPK3-205ENST00000531504 SCNN1GP51170 649 aa22.11■■□□□ 1.13
HIPK3-205ENST00000531504 NCBP1Q09161 790 aaKnown RBP22.11■■□□□ 1.13
HIPK3-205ENST00000531504 KRT32Q14532 448 aa22.11■■□□□ 1.13
HIPK3-205ENST00000531504 ZBTB41Q5SVQ8 909 aa22.11■■□□□ 1.13
HIPK3-205ENST00000531504 NOTUMQ6P988 496 aa22.11■■□□□ 1.13
HIPK3-205ENST00000531504 GRASPQ7Z6J2 395 aaPredicted RBP22.11■■□□□ 1.13
HIPK3-205ENST00000531504 B3GALT6Q96L58 329 aa22.11■■□□□ 1.13
HIPK3-205ENST00000531504 NELL2Q99435 816 aa22.11■■□□□ 1.13
HIPK3-205ENST00000531504 ADAM28Q9UKQ2 775 aa22.11■■□□□ 1.13
HIPK3-205ENST00000531504 MAP1BP46821 2468 aaKnown RBP22.11■■□□□ 1.13
HIPK3-205ENST00000531504 F8W810 466 aa22.1■■□□□ 1.13
HIPK3-205ENST00000531504 EDIL3O43854 480 aa22.1■■□□□ 1.13
HIPK3-205ENST00000531504 LILRB5O75023 590 aa22.1■■□□□ 1.13
HIPK3-205ENST00000531504 RFC5P40937 340 aa22.1■■□□□ 1.13
HIPK3-205ENST00000531504 LAMTOR4Q0VGL1 99 aa22.1■■□□□ 1.13
HIPK3-205ENST00000531504 TBCKQ8TEA7 893 aa22.1■■□□□ 1.13
HIPK3-205ENST00000531504 TCP11Q8WWU5 503 aa22.1■■□□□ 1.13
HIPK3-205ENST00000531504 CEP170P1Q96L14 293 aa22.1■■□□□ 1.13
HIPK3-205ENST00000531504 FAM126AQ9BYI3 521 aaPredicted RBP22.1■■□□□ 1.13
HIPK3-205ENST00000531504 GPR62Q9BZJ7 368 aa22.1■■□□□ 1.13
HIPK3-205ENST00000531504 FBXW11Q9UKB1 542 aa22.1■■□□□ 1.13
HIPK3-205ENST00000531504 MTF2Q9Y483 593 aaPredicted RBP22.1■■□□□ 1.13
HIPK3-205ENST00000531504 DOCK6Q96HP0 2047 aa22.09■■□□□ 1.13
HIPK3-205ENST00000531504 DCDC2BA2VCK2 349 aa22.09■■□□□ 1.13
HIPK3-205ENST00000531504 ASAP2O43150 1006 aa22.09■■□□□ 1.13
HIPK3-205ENST00000531504 XYLBO75191 536 aa22.09■■□□□ 1.13
HIPK3-205ENST00000531504 RPL17P18621 184 aaKnown RBP22.09■■□□□ 1.13
HIPK3-205ENST00000531504 QARSP47897 775 aaKnown RBP22.09■■□□□ 1.13
HIPK3-205ENST00000531504 PPM1LQ5SGD2 360 aa22.09■■□□□ 1.13
HIPK3-205ENST00000531504 RNF149Q8NC42 400 aa22.09■■□□□ 1.13
HIPK3-205ENST00000531504 NELL1Q92832 810 aa22.09■■□□□ 1.13
HIPK3-205ENST00000531504 FGF13Q92913 245 aa22.09■■□□□ 1.13
HIPK3-205ENST00000531504 TMEM143Q96AN5 459 aa22.09■■□□□ 1.13
HIPK3-205ENST00000531504 ZFP42Q96MM3 310 aa22.09■■□□□ 1.13
HIPK3-205ENST00000531504 PHF20Q9BVI0 1012 aa22.09■■□□□ 1.13
HIPK3-205ENST00000531504 RNF26Q9BY78 433 aaPredicted RBP22.09■■□□□ 1.13
HIPK3-205ENST00000531504 TRIM6Q9C030 488 aaPredicted RBP22.09■■□□□ 1.13
HIPK3-205ENST00000531504 DHX33Q9H6R0 707 aaKnown RBP22.09■■□□□ 1.13
HIPK3-205ENST00000531504 GIT1Q9Y2X7 761 aa22.09■■□□□ 1.13
HIPK3-205ENST00000531504 COL4A3Q01955 1670 aa22.09■■□□□ 1.13
HIPK3-205ENST00000531504 NID2Q14112 1375 aa22.09■■□□□ 1.13
HIPK3-205ENST00000531504 SF3B1O75533 1304 aaKnown RBP eCLIP22.08■■□□□ 1.13
HIPK3-205ENST00000531504 CYP3A7-CYP3A51PA0A087WV96 503 aa22.08■■□□□ 1.13
HIPK3-205ENST00000531504 ADRB1P08588 477 aa22.08■■□□□ 1.13
HIPK3-205ENST00000531504 CYP3A7P24462 503 aa22.08■■□□□ 1.13
HIPK3-205ENST00000531504 HOXA9P31269 272 aa22.08■■□□□ 1.13
HIPK3-205ENST00000531504 RPS9P46781 194 aaKnown RBP22.08■■□□□ 1.13
HIPK3-205ENST00000531504 NPEPPSP55786 919 aa22.08■■□□□ 1.13
HIPK3-205ENST00000531504 TSGA10IPQ3SY00 556 aa22.08■■□□□ 1.13
HIPK3-205ENST00000531504 BMP2KLQ5H9B9 411 aa22.08■■□□□ 1.13
HIPK3-205ENST00000531504 CLDN23Q96B33 292 aa22.08■■□□□ 1.13
HIPK3-205ENST00000531504 EIF2AQ9BY44 585 aaKnown RBP22.08■■□□□ 1.13
HIPK3-205ENST00000531504 RNF39Q9H2S5 420 aa22.08■■□□□ 1.13
HIPK3-205ENST00000531504 SH3GLB2Q9NR46 395 aa22.08■■□□□ 1.13
HIPK3-205ENST00000531504 VPS54Q9P1Q0 977 aa22.08■■□□□ 1.13
HIPK3-205ENST00000531504 RAB23Q9ULC3 237 aa22.08■■□□□ 1.13
HIPK3-205ENST00000531504 MRPS17Q9Y2R5 130 aaKnown RBP22.08■■□□□ 1.13
HIPK3-205ENST00000531504 TSPAN1O60635 241 aa22.07■■□□□ 1.12
HIPK3-205ENST00000531504 TADA2AO75478 443 aa22.07■■□□□ 1.12
HIPK3-205ENST00000531504 TDP2O95551 362 aa22.07■■□□□ 1.12
HIPK3-205ENST00000531504 NLRP5P59047 1200 aa22.07■■□□□ 1.12
HIPK3-205ENST00000531504 GRIK3Q13003 919 aa22.07■■□□□ 1.12
HIPK3-205ENST00000531504 ADCK5Q3MIX3 580 aa22.07■■□□□ 1.12
HIPK3-205ENST00000531504 ETNPPLQ8TBG4 499 aa22.07■■□□□ 1.12
HIPK3-205ENST00000531504 APOL6Q9BWW8 343 aa22.07■■□□□ 1.12
HIPK3-205ENST00000531504 CSRNP2Q9H175 543 aa22.07■■□□□ 1.12
HIPK3-205ENST00000531504 PRMT8Q9NR22 394 aaPredicted RBP22.07■■□□□ 1.12
HIPK3-205ENST00000531504 MIOSQ9NXC5 875 aa22.07■■□□□ 1.12
HIPK3-205ENST00000531504 POLIQ9UNA4 740 aa22.07■■□□□ 1.12
HIPK3-205ENST00000531504 HES2Q9Y543 173 aa22.07■■□□□ 1.12
HIPK3-205ENST00000531504 ZMYM2Q9UBW7 1377 aa22.07■■□□□ 1.12
HIPK3-205ENST00000531504 CHD8Q9HCK8 2581 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms