RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 GDPD2Q9HCC8 539 aa18.94■□□□□ 0.62
LMX1B-203ENST00000526117 PANK4Q9NVE7 773 aa18.94■□□□□ 0.62
LMX1B-203ENST00000526117 PVALEFA0A1B0GWK0 134 aa18.93■□□□□ 0.62
LMX1B-203ENST00000526117 CTNNB1P35222 781 aa18.93■□□□□ 0.62
LMX1B-203ENST00000526117 NDUFA8P51970 172 aa18.93■□□□□ 0.62
LMX1B-203ENST00000526117 MCL1Q07820 350 aa18.93■□□□□ 0.62
LMX1B-203ENST00000526117 EHHADHQ08426 723 aa18.93■□□□□ 0.62
LMX1B-203ENST00000526117 UNC13DQ70J99 1090 aa18.93■□□□□ 0.62
LMX1B-203ENST00000526117 CDR2LQ86X02 465 aaPredicted RBP18.93■□□□□ 0.62
LMX1B-203ENST00000526117 MYLIPQ8WY64 445 aa18.93■□□□□ 0.62
LMX1B-203ENST00000526117 CDT1Q9H211 546 aa18.93■□□□□ 0.62
LMX1B-203ENST00000526117 RNF39Q9H2S5 420 aa18.93■□□□□ 0.62
LMX1B-203ENST00000526117 ZHX3Q9H4I2 956 aa18.93■□□□□ 0.62
LMX1B-203ENST00000526117 TBC1D13Q9NVG8 400 aa18.93■□□□□ 0.62
LMX1B-203ENST00000526117 SERTAD1Q9UHV2 236 aa18.93■□□□□ 0.62
LMX1B-203ENST00000526117 PCDHB12Q9Y5F1 795 aa18.93■□□□□ 0.62
LMX1B-203ENST00000526117 ARL5CA6NH57 179 aa18.92■□□□□ 0.62
LMX1B-203ENST00000526117 IDEP14735 1019 aa18.92■□□□□ 0.62
LMX1B-203ENST00000526117 LIG1P18858 919 aa18.92■□□□□ 0.62
LMX1B-203ENST00000526117 IBSPP21815 317 aaPredicted RBP18.92■□□□□ 0.62
LMX1B-203ENST00000526117 NMT1P30419 496 aaKnown RBP18.92■□□□□ 0.62
LMX1B-203ENST00000526117 PPM1AP35813 382 aa18.92■□□□□ 0.62
LMX1B-203ENST00000526117 GRM5P41594 1212 aa18.92■□□□□ 0.62
LMX1B-203ENST00000526117 UBE3AQ05086 875 aa18.92■□□□□ 0.62
LMX1B-203ENST00000526117 COASYQ13057 564 aa18.92■□□□□ 0.62
LMX1B-203ENST00000526117 ADGRE1Q14246 886 aa18.92■□□□□ 0.62
LMX1B-203ENST00000526117 ZNF568Q3ZCX4 644 aa18.92■□□□□ 0.62
LMX1B-203ENST00000526117 LONRF3Q496Y0 759 aa18.92■□□□□ 0.62
LMX1B-203ENST00000526117 HERC4Q5GLZ8 1057 aaPredicted RBP18.92■□□□□ 0.62
LMX1B-203ENST00000526117 COLGALT1Q8NBJ5 622 aa18.92■□□□□ 0.62
LMX1B-203ENST00000526117 PAGE5Q96GU1 130 aa18.92■□□□□ 0.62
LMX1B-203ENST00000526117 GOLPH3LQ9H4A5 285 aa18.92■□□□□ 0.62
LMX1B-203ENST00000526117 MRPL44Q9H9J2 332 aaKnown RBP18.92■□□□□ 0.62
LMX1B-203ENST00000526117 CERS4Q9HA82 394 aa18.92■□□□□ 0.62
LMX1B-203ENST00000526117 USP20Q9Y2K6 914 aa18.92■□□□□ 0.62
LMX1B-203ENST00000526117 HES2Q9Y543 173 aa18.92■□□□□ 0.62
LMX1B-203ENST00000526117 PCDHB13Q9Y5F0 798 aa18.92■□□□□ 0.62
LMX1B-203ENST00000526117 COL6A3P12111 3177 aa18.91■□□□□ 0.62
LMX1B-203ENST00000526117 FOSL2P15408 326 aa18.91■□□□□ 0.62
LMX1B-203ENST00000526117 ASIC1P78348 528 aa18.91■□□□□ 0.62
LMX1B-203ENST00000526117 GPM6BQ13491 265 aa18.91■□□□□ 0.62
LMX1B-203ENST00000526117 NOLC1Q14978 699 aaKnown RBP eCLIP18.91■□□□□ 0.62
LMX1B-203ENST00000526117 KYAT1Q16773 422 aa18.91■□□□□ 0.62
LMX1B-203ENST00000526117 L1TD1Q5T7N2 865 aaKnown RBP18.91■□□□□ 0.62
LMX1B-203ENST00000526117 CLEC17AQ6ZS10 378 aa18.91■□□□□ 0.62
LMX1B-203ENST00000526117 STXBP4Q6ZWJ1 553 aa18.91■□□□□ 0.62
LMX1B-203ENST00000526117 GSTCDQ8NEC7 633 aa18.91■□□□□ 0.62
LMX1B-203ENST00000526117 STAMQ92783 540 aa18.91■□□□□ 0.62
LMX1B-203ENST00000526117 IPO9Q96P70 1041 aaKnown RBP18.91■□□□□ 0.62
LMX1B-203ENST00000526117 TMEM175Q9BSA9 504 aa18.91■□□□□ 0.62
LMX1B-203ENST00000526117 TSHZ2Q9NRE2 1034 aa18.91■□□□□ 0.62
LMX1B-203ENST00000526117 MTUS1Q9ULD2 1270 aa18.91■□□□□ 0.62
LMX1B-203ENST00000526117 LZTS1Q9Y250 596 aa18.91■□□□□ 0.62
LMX1B-203ENST00000526117 STYXL1Q9Y6J8 313 aa18.91■□□□□ 0.62
LMX1B-203ENST00000526117 EYSQ5T1H1 3165 aa18.9■□□□□ 0.62
LMX1B-203ENST00000526117 GOLGA6L4A6NEF3 574 aa18.9■□□□□ 0.62
LMX1B-203ENST00000526117 HNRNPDLO14979 420 aaKnown RBP18.9■□□□□ 0.62
LMX1B-203ENST00000526117 EIF3DO15371 548 aaKnown RBP eCLIP18.9■□□□□ 0.62
LMX1B-203ENST00000526117 CLDN3O15551 220 aa18.9■□□□□ 0.62
LMX1B-203ENST00000526117 GTPBP6O43824 516 aaPredicted RBP18.9■□□□□ 0.62
LMX1B-203ENST00000526117 RECQL4O94761 1208 aa18.9■□□□□ 0.62
LMX1B-203ENST00000526117 MLH1P40692 756 aa18.9■□□□□ 0.62
LMX1B-203ENST00000526117 LIG4P49917 911 aa18.9■□□□□ 0.62
LMX1B-203ENST00000526117 PLCB3Q01970 1234 aa18.9■□□□□ 0.62
LMX1B-203ENST00000526117 DSC1Q08554 894 aa18.9■□□□□ 0.62
LMX1B-203ENST00000526117 GRIK3Q13003 919 aa18.9■□□□□ 0.62
LMX1B-203ENST00000526117 XKR4Q5GH76 650 aa18.9■□□□□ 0.62
LMX1B-203ENST00000526117 KANK3Q6NY19 840 aa18.9■□□□□ 0.62
LMX1B-203ENST00000526117 KCNT2Q6UVM3 1135 aa18.9■□□□□ 0.62
LMX1B-203ENST00000526117 FMR1NBQ8N0W7 255 aaPredicted RBP18.9■□□□□ 0.62
LMX1B-203ENST00000526117 GDPD5Q8WTR4 605 aa18.9■□□□□ 0.62
LMX1B-203ENST00000526117 MRPL38Q96DV4 380 aaKnown RBP18.9■□□□□ 0.62
LMX1B-203ENST00000526117 ZNF558Q96NG5 402 aa18.9■□□□□ 0.62
LMX1B-203ENST00000526117 GAD1Q99259 594 aa18.9■□□□□ 0.62
LMX1B-203ENST00000526117 STK39Q9UEW8 545 aa18.9■□□□□ 0.62
LMX1B-203ENST00000526117 PLAGL2Q9UPG8 496 aa18.9■□□□□ 0.62
LMX1B-203ENST00000526117 MTCH2Q9Y6C9 303 aa18.9■□□□□ 0.62
LMX1B-203ENST00000526117 A0A0B4J269 797 aa18.89■□□□□ 0.61
LMX1B-203ENST00000526117 ZNF202O95125 648 aa18.89■□□□□ 0.61
LMX1B-203ENST00000526117 AKAP5P24588 427 aa18.89■□□□□ 0.61
LMX1B-203ENST00000526117 POU5F1Q01860 360 aaKnown RBP18.89■□□□□ 0.61
LMX1B-203ENST00000526117 FAM160A1Q05DH4 1040 aa18.89■□□□□ 0.61
LMX1B-203ENST00000526117 CUL4BQ13620 913 aa18.89■□□□□ 0.61
LMX1B-203ENST00000526117 PTPROQ16827 1216 aa18.89■□□□□ 0.61
LMX1B-203ENST00000526117 ZC2HC1CQ53FD0 456 aaPredicted RBP18.89■□□□□ 0.61
LMX1B-203ENST00000526117 SLFN12LQ6IEE8 588 aa18.89■□□□□ 0.61
LMX1B-203ENST00000526117 ALKAL1Q6UXT8 129 aa18.89■□□□□ 0.61
LMX1B-203ENST00000526117 KRBA2Q6ZNG9 492 aa18.89■□□□□ 0.61
LMX1B-203ENST00000526117 EPM2AIP1Q7L775 607 aaPredicted RBP18.89■□□□□ 0.61
LMX1B-203ENST00000526117 KLHL23Q8NBE8 558 aa18.89■□□□□ 0.61
LMX1B-203ENST00000526117 ENGASEQ8NFI3 743 aa18.89■□□□□ 0.61
LMX1B-203ENST00000526117 BICD1Q96G01 975 aa18.89■□□□□ 0.61
LMX1B-203ENST00000526117 CCDC34Q96HJ3 373 aa18.89■□□□□ 0.61
LMX1B-203ENST00000526117 CCDC94Q9BW85 323 aaPredicted RBP18.89■□□□□ 0.61
LMX1B-203ENST00000526117 NRDE2Q9H7Z3 1164 aa18.89■□□□□ 0.61
LMX1B-203ENST00000526117 TOPORSQ9NS56 1045 aaPredicted RBP18.89■□□□□ 0.61
LMX1B-203ENST00000526117 SNTG2Q9NY99 539 aa18.89■□□□□ 0.61
LMX1B-203ENST00000526117 HCSTQ9UBK5 93 aa18.89■□□□□ 0.61
LMX1B-203ENST00000526117 EXOC7Q9UPT5 735 aa18.89■□□□□ 0.61
LMX1B-203ENST00000526117 INPP5FQ9Y2H2 1132 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms