RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 SEZ6LQ9BYH1 1024 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 INO80BQ9C086 356 aaPredicted RBP9.3□□□□□ -0.92
VAPB-206ENST00000520497 CRISPLD2Q9H0B8 497 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 RNF208Q9H0X6 261 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 VPS16Q9H269 839 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 PCIF1Q9H4Z3 704 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 PTPRHQ9HD43 1115 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 ARMCX3Q9UH62 379 aaPredicted RBP9.3□□□□□ -0.92
VAPB-206ENST00000520497 USP20Q9Y2K6 914 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 FRMD4BQ9Y2L6 1034 aa9.3□□□□□ -0.92
VAPB-206ENST00000520497 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.3□□□□□ -0.924e-13■□□□□ 9.8
VAPB-206ENST00000520497 A0A1W2PQC6 194 aa9.29□□□□□ -0.92
VAPB-206ENST00000520497 PES1O00541 588 aaKnown RBP9.29□□□□□ -0.92
VAPB-206ENST00000520497 TSPAN1O60635 241 aa9.29□□□□□ -0.92
VAPB-206ENST00000520497 EXOC3O60645 756 aa9.29□□□□□ -0.92
VAPB-206ENST00000520497 ADRB2P07550 413 aa9.29□□□□□ -0.92
VAPB-206ENST00000520497 DARSP14868 501 aaKnown RBP9.29□□□□□ -0.92
VAPB-206ENST00000520497 ARF4P18085 180 aaPredicted RBP9.29□□□□□ -0.92
VAPB-206ENST00000520497 GJA8P48165 433 aa9.29□□□□□ -0.92
VAPB-206ENST00000520497 MRPS6P82932 125 aaKnown RBP9.29□□□□□ -0.92
VAPB-206ENST00000520497 ENPEPQ07075 957 aa9.29□□□□□ -0.92
VAPB-206ENST00000520497 MCL1Q07820 350 aa9.29□□□□□ -0.92
VAPB-206ENST00000520497 MGAT3Q09327 533 aa9.29□□□□□ -0.92
VAPB-206ENST00000520497 TMEM62Q0P6H9 643 aa9.29□□□□□ -0.92
VAPB-206ENST00000520497 BFSP1Q12934 665 aa9.29□□□□□ -0.92
VAPB-206ENST00000520497 PTK7Q13308 1070 aa9.29□□□□□ -0.92
VAPB-206ENST00000520497 PRPF4BQ13523 1007 aaKnown RBP9.29□□□□□ -0.92
VAPB-206ENST00000520497 HSP90AA2PQ14568 343 aaPredicted RBP9.29□□□□□ -0.92
VAPB-206ENST00000520497 SNX17Q15036 470 aa9.29□□□□□ -0.92
VAPB-206ENST00000520497 SNRNP35Q16560 246 aaKnown RBP9.29□□□□□ -0.92
VAPB-206ENST00000520497 PTGISQ16647 500 aa9.29□□□□□ -0.92
VAPB-206ENST00000520497 TRIM71Q2Q1W2 868 aaKnown RBP9.29□□□□□ -0.92
VAPB-206ENST00000520497 VWA3BQ502W6 1294 aa9.29□□□□□ -0.92
VAPB-206ENST00000520497 FAM47CQ5HY64 1035 aa9.29□□□□□ -0.92
VAPB-206ENST00000520497 ATF7IP2Q5U623 682 aa9.29□□□□□ -0.92
VAPB-206ENST00000520497 SPECC1LQ69YQ0 1117 aa9.29□□□□□ -0.92
VAPB-206ENST00000520497 CRELD2Q6UXH1 353 aaPredicted RBP9.29□□□□□ -0.92
VAPB-206ENST00000520497 INTS8Q75QN2 995 aaKnown RBP9.29□□□□□ -0.92
VAPB-206ENST00000520497 CCDC186Q7Z3E2 898 aa9.29□□□□□ -0.92
VAPB-206ENST00000520497 PPFIBP1Q86W92 1011 aa9.29□□□□□ -0.92
VAPB-206ENST00000520497 CBWD2Q8IUF1 395 aa9.29□□□□□ -0.92
VAPB-206ENST00000520497 GPD1LQ8N335 351 aa9.29□□□□□ -0.92
VAPB-206ENST00000520497 DIS3LQ8TF46 1054 aaKnown RBP9.29□□□□□ -0.92
VAPB-206ENST00000520497 U2AF1L4Q8WU68 220 aaKnown RBP9.29□□□□□ -0.92
VAPB-206ENST00000520497 TMEM40Q8WWA1 233 aa9.29□□□□□ -0.92
VAPB-206ENST00000520497 DHX38Q92620 1227 aaKnown RBP9.29□□□□□ -0.92
VAPB-206ENST00000520497 SAAL1Q96ER3 474 aa9.29□□□□□ -0.92
VAPB-206ENST00000520497 ZBTB45Q96K62 511 aaPredicted RBP9.29□□□□□ -0.92
VAPB-206ENST00000520497 MFSD14AQ96MC6 490 aa9.29□□□□□ -0.92
VAPB-206ENST00000520497 DCBLD2Q96PD2 775 aa9.29□□□□□ -0.92
VAPB-206ENST00000520497 ERGIC2Q96RQ1 377 aa9.29□□□□□ -0.92
VAPB-206ENST00000520497 OSMRQ99650 979 aa9.29□□□□□ -0.92
VAPB-206ENST00000520497 GCOM2Q9BZD3 368 aaPredicted RBP9.29□□□□□ -0.92
VAPB-206ENST00000520497 NDST4Q9H3R1 872 aa9.29□□□□□ -0.92
VAPB-206ENST00000520497 CDHR5Q9HBB8 845 aa9.29□□□□□ -0.92
VAPB-206ENST00000520497 STARD7Q9NQZ5 370 aa9.29□□□□□ -0.92
VAPB-206ENST00000520497 ANKFY1Q9P2R3 1169 aa9.29□□□□□ -0.92
VAPB-206ENST00000520497 AGO2Q9UKV8 859 aaKnown RBP9.29□□□□□ -0.92
VAPB-206ENST00000520497 TNFSF13BQ9Y275 285 aa9.29□□□□□ -0.92
VAPB-206ENST00000520497 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.29□□□□□ -0.92
VAPB-206ENST00000520497 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.29□□□□□ -0.92
VAPB-206ENST00000520497 ITIH6Q6UXX5 1313 aa9.29□□□□□ -0.92
VAPB-206ENST00000520497 LTBP2Q14767 1821 aa9.28□□□□□ -0.92
VAPB-206ENST00000520497 TTC3P53804 2025 aa9.28□□□□□ -0.92
VAPB-206ENST00000520497 GOLGA8IPA6NC78 632 aa9.28□□□□□ -0.92
VAPB-206ENST00000520497 GOLGA8JA6NMD2 632 aa9.28□□□□□ -0.92
VAPB-206ENST00000520497 ARVCFO00192 962 aa9.28□□□□□ -0.92
VAPB-206ENST00000520497 CLDN3O15551 220 aa9.28□□□□□ -0.92
VAPB-206ENST00000520497 CCP110O43303 1012 aa9.28□□□□□ -0.92
VAPB-206ENST00000520497 EXTL3O43909 919 aa9.28□□□□□ -0.92
VAPB-206ENST00000520497 CSDE1O75534 798 aaKnown RBP9.28□□□□□ -0.92
VAPB-206ENST00000520497 SGPL1O95470 568 aa9.28□□□□□ -0.92
VAPB-206ENST00000520497 LDHAP00338 332 aaKnown RBP9.28□□□□□ -0.92
VAPB-206ENST00000520497 EIF4BP23588 611 aaKnown RBP9.28□□□□□ -0.92
VAPB-206ENST00000520497 CDK7P50613 346 aa9.28□□□□□ -0.92
VAPB-206ENST00000520497 CRYBB1P53674 252 aaPredicted RBP9.28□□□□□ -0.92
VAPB-206ENST00000520497 UBXN1Q04323 297 aa9.28□□□□□ -0.92
VAPB-206ENST00000520497 KCNH2Q12809 1159 aa9.28□□□□□ -0.92
VAPB-206ENST00000520497 TBX2Q13207 712 aaPredicted RBP9.28□□□□□ -0.92
VAPB-206ENST00000520497 NOLC1Q14978 699 aaKnown RBP eCLIP9.28□□□□□ -0.92
VAPB-206ENST00000520497 TSR1Q2NL82 804 aaKnown RBP9.28□□□□□ -0.92
VAPB-206ENST00000520497 C1orf220Q5T0J3 134 aa9.28□□□□□ -0.92
VAPB-206ENST00000520497 EEF1DP3Q658K8 133 aa9.28□□□□□ -0.92
VAPB-206ENST00000520497 MPZL3Q6UWV2 235 aa9.28□□□□□ -0.92
VAPB-206ENST00000520497 RSPH3Q86UC2 560 aa9.28□□□□□ -0.92
VAPB-206ENST00000520497 PLEKHO2Q8TD55 490 aa9.28□□□□□ -0.92
VAPB-206ENST00000520497 DPF3Q92784 378 aa9.28□□□□□ -0.92
VAPB-206ENST00000520497 SCLT1Q96NL6 688 aa9.28□□□□□ -0.92
VAPB-206ENST00000520497 CELF4Q9BZC1 486 aaKnown RBP9.28□□□□□ -0.92
VAPB-206ENST00000520497 SENP6Q9GZR1 1112 aaPredicted RBP9.28□□□□□ -0.92
VAPB-206ENST00000520497 CDT1Q9H211 546 aa9.28□□□□□ -0.92
VAPB-206ENST00000520497 PDZD7Q9H5P4 517 aa9.28□□□□□ -0.92
VAPB-206ENST00000520497 KIAA1586Q9HCI6 787 aa9.28□□□□□ -0.92
VAPB-206ENST00000520497 TRMT13Q9NUP7 481 aaKnown RBP9.28□□□□□ -0.92
VAPB-206ENST00000520497 TRPV2Q9Y5S1 764 aa9.28□□□□□ -0.92
VAPB-206ENST00000520497 CDY2AQ9Y6F7 541 aa9.28□□□□□ -0.92
VAPB-206ENST00000520497 A0A1B0GUA9 196 aa9.27□□□□□ -0.93
VAPB-206ENST00000520497 GTPBP10A4D1E9 387 aaKnown RBP9.27□□□□□ -0.93
VAPB-206ENST00000520497 OGTO15294 1046 aa9.27□□□□□ -0.93
VAPB-206ENST00000520497 B4GALT4O60513 344 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms