RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 PRPF31Q8WWY3 499 aaKnown RBP12.8□□□□□ -0.36
TRAPPC9-203ENST00000517667 FGF14Q92915 247 aa12.8□□□□□ -0.36
TRAPPC9-203ENST00000517667 GJA10Q969M2 543 aa12.8□□□□□ -0.36
TRAPPC9-203ENST00000517667 EPC1Q9H2F5 836 aa12.8□□□□□ -0.36
TRAPPC9-203ENST00000517667 MINDY3Q9H8M7 445 aa12.8□□□□□ -0.36
TRAPPC9-203ENST00000517667 SH3GLB2Q9NR46 395 aa12.8□□□□□ -0.36
TRAPPC9-203ENST00000517667 CDH7Q9ULB5 785 aa12.8□□□□□ -0.36
TRAPPC9-203ENST00000517667 ZMYM2Q9UBW7 1377 aa12.8□□□□□ -0.36
TRAPPC9-203ENST00000517667 GPR179Q6PRD1 2367 aa12.79□□□□□ -0.36
TRAPPC9-203ENST00000517667 EDIL3O43854 480 aa12.79□□□□□ -0.36
TRAPPC9-203ENST00000517667 LRRN2O75325 713 aa12.79□□□□□ -0.36
TRAPPC9-203ENST00000517667 HNRNPA1P09651 372 aaKnown RBP eCLIP12.79□□□□□ -0.36
TRAPPC9-203ENST00000517667 SRGAP2CP0DJJ0 459 aa12.79□□□□□ -0.36
TRAPPC9-203ENST00000517667 QARSP47897 775 aaKnown RBP12.79□□□□□ -0.36
TRAPPC9-203ENST00000517667 SCNN1GP51170 649 aa12.79□□□□□ -0.36
TRAPPC9-203ENST00000517667 ATXN1P54253 815 aaKnown RBP12.79□□□□□ -0.36
TRAPPC9-203ENST00000517667 LAMTOR4Q0VGL1 99 aa12.79□□□□□ -0.36
TRAPPC9-203ENST00000517667 UBXN2BQ14CS0 331 aa12.79□□□□□ -0.36
TRAPPC9-203ENST00000517667 ADCK5Q3MIX3 580 aa12.79□□□□□ -0.36
TRAPPC9-203ENST00000517667 LIN9Q5TKA1 542 aa12.79□□□□□ -0.36
TRAPPC9-203ENST00000517667 PLA2G4FQ68DD2 849 aa12.79□□□□□ -0.36
TRAPPC9-203ENST00000517667 FUT10Q6P4F1 479 aa12.79□□□□□ -0.36
TRAPPC9-203ENST00000517667 MOXD1Q6UVY6 613 aa12.79□□□□□ -0.36
TRAPPC9-203ENST00000517667 PARM1Q6UWI2 310 aa12.79□□□□□ -0.36
TRAPPC9-203ENST00000517667 ZBTB44Q8NCP5 570 aa12.79□□□□□ -0.36
TRAPPC9-203ENST00000517667 MBOAT7Q96N66 472 aa12.79□□□□□ -0.36
TRAPPC9-203ENST00000517667 GAD1Q99259 594 aa12.79□□□□□ -0.36
TRAPPC9-203ENST00000517667 RTKNQ9BST9 563 aa12.79□□□□□ -0.36
TRAPPC9-203ENST00000517667 DHX33Q9H6R0 707 aaKnown RBP12.79□□□□□ -0.36
TRAPPC9-203ENST00000517667 ZSCAN32Q9NX65 697 aa12.79□□□□□ -0.36
TRAPPC9-203ENST00000517667 ADAM28Q9UKQ2 775 aa12.79□□□□□ -0.36
TRAPPC9-203ENST00000517667 SMG5Q9UPR3 1016 aaKnown RBP12.79□□□□□ -0.36
TRAPPC9-203ENST00000517667 GIT1Q9Y2X7 761 aa12.79□□□□□ -0.36
TRAPPC9-203ENST00000517667 NCAM2O15394 837 aa12.78□□□□□ -0.36
TRAPPC9-203ENST00000517667 TBC1D4O60343 1298 aa12.78□□□□□ -0.36
TRAPPC9-203ENST00000517667 CSTF1Q05048 431 aaKnown RBP12.78□□□□□ -0.36
TRAPPC9-203ENST00000517667 SLC44A4Q53GD3 710 aa12.78□□□□□ -0.36
TRAPPC9-203ENST00000517667 ZBTB41Q5SVQ8 909 aa12.78□□□□□ -0.36
TRAPPC9-203ENST00000517667 GLYCTKQ8IVS8 523 aa12.78□□□□□ -0.36
TRAPPC9-203ENST00000517667 RNF149Q8NC42 400 aa12.78□□□□□ -0.36
TRAPPC9-203ENST00000517667 ETNPPLQ8TBG4 499 aa12.78□□□□□ -0.36
TRAPPC9-203ENST00000517667 CEP170P1Q96L14 293 aa12.78□□□□□ -0.36
TRAPPC9-203ENST00000517667 B3GALT6Q96L58 329 aa12.78□□□□□ -0.36
TRAPPC9-203ENST00000517667 NELL2Q99435 816 aa12.78□□□□□ -0.36
TRAPPC9-203ENST00000517667 FAM126AQ9BYI3 521 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC9-203ENST00000517667 TRIM6Q9C030 488 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC9-203ENST00000517667 VPS54Q9P1Q0 977 aa12.78□□□□□ -0.36
TRAPPC9-203ENST00000517667 FBXW11Q9UKB1 542 aa12.78□□□□□ -0.36
TRAPPC9-203ENST00000517667 CHD8Q9HCK8 2581 aa12.78□□□□□ -0.36
TRAPPC9-203ENST00000517667 SPTBN2O15020 2390 aa12.78□□□□□ -0.36
TRAPPC9-203ENST00000517667 COL4A3Q01955 1670 aa12.77□□□□□ -0.36
TRAPPC9-203ENST00000517667 FAM170BA6NMN3 283 aa12.77□□□□□ -0.37
TRAPPC9-203ENST00000517667 F8W810 466 aa12.77□□□□□ -0.37
TRAPPC9-203ENST00000517667 TSPAN1O60635 241 aa12.77□□□□□ -0.37
TRAPPC9-203ENST00000517667 LILRB5O75023 590 aa12.77□□□□□ -0.37
TRAPPC9-203ENST00000517667 XYLBO75191 536 aa12.77□□□□□ -0.37
TRAPPC9-203ENST00000517667 TDP2O95551 362 aa12.77□□□□□ -0.37
TRAPPC9-203ENST00000517667 HOXA9P31269 272 aa12.77□□□□□ -0.37
TRAPPC9-203ENST00000517667 RPS9P46781 194 aaKnown RBP12.77□□□□□ -0.37
TRAPPC9-203ENST00000517667 NPEPPSP55786 919 aa12.77□□□□□ -0.37
TRAPPC9-203ENST00000517667 NLRP5P59047 1200 aa12.77□□□□□ -0.37
TRAPPC9-203ENST00000517667 GRIK3Q13003 919 aa12.77□□□□□ -0.37
TRAPPC9-203ENST00000517667 PPP2R5CQ13362 524 aa12.77□□□□□ -0.37
TRAPPC9-203ENST00000517667 MXD4Q14582 209 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC9-203ENST00000517667 EMC2Q15006 297 aa12.77□□□□□ -0.37
TRAPPC9-203ENST00000517667 GRASPQ7Z6J2 395 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC9-203ENST00000517667 FERMT3Q86UX7 667 aa12.77□□□□□ -0.37
TRAPPC9-203ENST00000517667 RASEFQ8IZ41 740 aa12.77□□□□□ -0.37
TRAPPC9-203ENST00000517667 NELL1Q92832 810 aa12.77□□□□□ -0.37
TRAPPC9-203ENST00000517667 FGF13Q92913 245 aa12.77□□□□□ -0.37
TRAPPC9-203ENST00000517667 TMEM143Q96AN5 459 aa12.77□□□□□ -0.37
TRAPPC9-203ENST00000517667 ZFP42Q96MM3 310 aa12.77□□□□□ -0.37
TRAPPC9-203ENST00000517667 RPP25Q9BUL9 199 aaKnown RBP12.77□□□□□ -0.37
TRAPPC9-203ENST00000517667 PHF20Q9BVI0 1012 aa12.77□□□□□ -0.37
TRAPPC9-203ENST00000517667 SLC26A6Q9BXS9 759 aa12.77□□□□□ -0.37
TRAPPC9-203ENST00000517667 EIF2AQ9BY44 585 aaKnown RBP12.77□□□□□ -0.37
TRAPPC9-203ENST00000517667 GPR62Q9BZJ7 368 aa12.77□□□□□ -0.37
TRAPPC9-203ENST00000517667 CSRNP2Q9H175 543 aa12.77□□□□□ -0.37
TRAPPC9-203ENST00000517667 RNF39Q9H2S5 420 aa12.77□□□□□ -0.37
TRAPPC9-203ENST00000517667 LTB4R2Q9NPC1 389 aa12.77□□□□□ -0.37
TRAPPC9-203ENST00000517667 GMEB2Q9UKD1 530 aa12.77□□□□□ -0.37
TRAPPC9-203ENST00000517667 PCDHA4Q9UN74 947 aa12.77□□□□□ -0.37
TRAPPC9-203ENST00000517667 SF3B1O75533 1304 aaKnown RBP eCLIP12.77□□□□□ -0.371e-7■■■■■ 172.3
TRAPPC9-203ENST00000517667 MAP1BP46821 2468 aaKnown RBP12.77□□□□□ -0.37
TRAPPC9-203ENST00000517667 P4HBP07237 508 aaKnown RBP12.76□□□□□ -0.37
TRAPPC9-203ENST00000517667 POU2F2P09086 479 aa12.76□□□□□ -0.37
TRAPPC9-203ENST00000517667 IFNAR1P17181 557 aa12.76□□□□□ -0.37
TRAPPC9-203ENST00000517667 RPL17P18621 184 aaKnown RBP12.76□□□□□ -0.37
TRAPPC9-203ENST00000517667 TFDP1Q14186 410 aa12.76□□□□□ -0.37
TRAPPC9-203ENST00000517667 NTRK3Q16288 839 aa12.76□□□□□ -0.37
TRAPPC9-203ENST00000517667 PPM1LQ5SGD2 360 aa12.76□□□□□ -0.37
TRAPPC9-203ENST00000517667 PDXDC1Q6P996 788 aa12.76□□□□□ -0.37
TRAPPC9-203ENST00000517667 Q6ZUG5 572 aa12.76□□□□□ -0.37
TRAPPC9-203ENST00000517667 OTUD6AQ7L8S5 288 aa12.76□□□□□ -0.37
TRAPPC9-203ENST00000517667 ST13P5Q8NFI4 369 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC9-203ENST00000517667 BRF1Q92994 677 aa12.76□□□□□ -0.37
TRAPPC9-203ENST00000517667 CLDN23Q96B33 292 aa12.76□□□□□ -0.37
TRAPPC9-203ENST00000517667 SLKQ9H2G2 1235 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC9-203ENST00000517667 DDX25Q9UHL0 483 aaKnown RBP12.76□□□□□ -0.37
TRAPPC9-203ENST00000517667 USP18Q9UMW8 372 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms