RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 LRP3O75074 770 aa17.71■□□□□ 0.43
PDLIM7-210ENST00000503827 HNRNPA1P09651 372 aaKnown RBP eCLIP17.71■□□□□ 0.43
PDLIM7-210ENST00000503827 RPL17P18621 184 aaKnown RBP17.71■□□□□ 0.43
PDLIM7-210ENST00000503827 GNA11P29992 359 aa17.71■□□□□ 0.43
PDLIM7-210ENST00000503827 NTHL1P78549 312 aa17.71■□□□□ 0.43
PDLIM7-210ENST00000503827 DMWDQ09019 674 aa17.71■□□□□ 0.43
PDLIM7-210ENST00000503827 LIN9Q5TKA1 542 aa17.71■□□□□ 0.43
PDLIM7-210ENST00000503827 FUT10Q6P4F1 479 aa17.71■□□□□ 0.43
PDLIM7-210ENST00000503827 ZNF852Q6ZMS4 543 aa17.71■□□□□ 0.43
PDLIM7-210ENST00000503827 CELF5Q8N6W0 485 aaKnown RBP17.71■□□□□ 0.43
PDLIM7-210ENST00000503827 SLC5A5Q92911 643 aa17.71■□□□□ 0.43
PDLIM7-210ENST00000503827 GAD1Q99259 594 aa17.71■□□□□ 0.43
PDLIM7-210ENST00000503827 COL4A3BPQ9Y5P4 624 aa17.71■□□□□ 0.43
PDLIM7-210ENST00000503827 BAHCC1Q9P281 2608 aa17.7■□□□□ 0.42
PDLIM7-210ENST00000503827 ARL5CA6NH57 179 aa17.7■□□□□ 0.42
PDLIM7-210ENST00000503827 GOLGA8AA7E2F4 631 aa17.7■□□□□ 0.42
PDLIM7-210ENST00000503827 GOLGA8BA8MQT2 603 aa17.7■□□□□ 0.42
PDLIM7-210ENST00000503827 F8W810 466 aa17.7■□□□□ 0.42
PDLIM7-210ENST00000503827 ADAMTS3O15072 1205 aa17.7■□□□□ 0.42
PDLIM7-210ENST00000503827 STBD1O95210 358 aa17.7■□□□□ 0.42
PDLIM7-210ENST00000503827 HOXA11P31270 313 aaPredicted RBP17.7■□□□□ 0.42
PDLIM7-210ENST00000503827 MLH1P40692 756 aa17.7■□□□□ 0.42
PDLIM7-210ENST00000503827 PPP2R5DQ14738 602 aa17.7■□□□□ 0.42
PDLIM7-210ENST00000503827 LPAL2Q16609 132 aa17.7■□□□□ 0.42
PDLIM7-210ENST00000503827 PPM1LQ5SGD2 360 aa17.7■□□□□ 0.42
PDLIM7-210ENST00000503827 SMG8Q8ND04 991 aaKnown RBP17.7■□□□□ 0.42
PDLIM7-210ENST00000503827 DDX1Q92499 740 aaKnown RBP17.7■□□□□ 0.42
PDLIM7-210ENST00000503827 CCDC136Q96JN2 1154 aa17.7■□□□□ 0.42
PDLIM7-210ENST00000503827 KXD1Q9BQD3 176 aa17.7■□□□□ 0.42
PDLIM7-210ENST00000503827 GPR62Q9BZJ7 368 aa17.7■□□□□ 0.42
PDLIM7-210ENST00000503827 FBXW11Q9UKB1 542 aa17.7■□□□□ 0.42
PDLIM7-210ENST00000503827 XYLBO75191 536 aa17.69■□□□□ 0.42
PDLIM7-210ENST00000503827 RETP07949 1114 aa17.69■□□□□ 0.42
PDLIM7-210ENST00000503827 KCNA4P22459 653 aa17.69■□□□□ 0.42
PDLIM7-210ENST00000503827 SCNN1GP51170 649 aa17.69■□□□□ 0.42
PDLIM7-210ENST00000503827 ADCY1Q08828 1119 aa17.69■□□□□ 0.42
PDLIM7-210ENST00000503827 MTAPQ13126 283 aa17.69■□□□□ 0.42
PDLIM7-210ENST00000503827 CREB3L3Q68CJ9 461 aa17.69■□□□□ 0.42
PDLIM7-210ENST00000503827 MIOSQ9NXC5 875 aa17.69■□□□□ 0.42
PDLIM7-210ENST00000503827 ADAM28Q9UKQ2 775 aa17.69■□□□□ 0.42
PDLIM7-210ENST00000503827 ANGPTL2Q9UKU9 493 aa17.69■□□□□ 0.42
PDLIM7-210ENST00000503827 BRPF3Q9ULD4 1205 aa17.69■□□□□ 0.42
PDLIM7-210ENST00000503827 POLIQ9UNA4 740 aa17.69■□□□□ 0.42
PDLIM7-210ENST00000503827 IPPQ9Y573 584 aa17.69■□□□□ 0.42
PDLIM7-210ENST00000503827 ERLIN2O94905 339 aa17.68■□□□□ 0.42
PDLIM7-210ENST00000503827 SRGAP2CP0DJJ0 459 aa17.68■□□□□ 0.42
PDLIM7-210ENST00000503827 HOXA9P31269 272 aa17.68■□□□□ 0.42
PDLIM7-210ENST00000503827 ITFG1Q8TB96 612 aa17.68■□□□□ 0.42
PDLIM7-210ENST00000503827 BICD2Q8TD16 824 aa17.68■□□□□ 0.42
PDLIM7-210ENST00000503827 SLC7A3Q8WY07 619 aa17.68■□□□□ 0.42
PDLIM7-210ENST00000503827 MINDY3Q9H8M7 445 aa17.68■□□□□ 0.42
PDLIM7-210ENST00000503827 SEMA4GQ9NTN9 838 aa17.68■□□□□ 0.42
PDLIM7-210ENST00000503827 RALYQ9UKM9 306 aaKnown RBP17.68■□□□□ 0.42
PDLIM7-210ENST00000503827 NOTCH4Q99466 2003 aa17.67■□□□□ 0.42
PDLIM7-210ENST00000503827 CCL16O15467 120 aa17.67■□□□□ 0.42
PDLIM7-210ENST00000503827 TADA2AO75478 443 aa17.67■□□□□ 0.42
PDLIM7-210ENST00000503827 PSMD10O75832 226 aa17.67■□□□□ 0.42
PDLIM7-210ENST00000503827 C8AP07357 584 aa17.67■□□□□ 0.42
PDLIM7-210ENST00000503827 CDC27P30260 824 aa17.67■□□□□ 0.42
PDLIM7-210ENST00000503827 USP11P51784 963 aa17.67■□□□□ 0.42
PDLIM7-210ENST00000503827 FZD5Q13467 585 aa17.67■□□□□ 0.42
PDLIM7-210ENST00000503827 PLA2G4FQ68DD2 849 aa17.67■□□□□ 0.42
PDLIM7-210ENST00000503827 PRSS55Q6UWB4 352 aaPredicted RBP17.67■□□□□ 0.42
PDLIM7-210ENST00000503827 PRR23CQ6ZRP0 262 aa17.67■□□□□ 0.42
PDLIM7-210ENST00000503827 PRR23BQ6ZRT6 265 aa17.67■□□□□ 0.42
PDLIM7-210ENST00000503827 ANO5Q75V66 913 aa17.67■□□□□ 0.42
PDLIM7-210ENST00000503827 EXOC8Q8IYI6 725 aa17.67■□□□□ 0.42
PDLIM7-210ENST00000503827 PRPF31Q8WWY3 499 aaKnown RBP17.67■□□□□ 0.42
PDLIM7-210ENST00000503827 PSPC1Q8WXF1 523 aaKnown RBP17.67■□□□□ 0.42
PDLIM7-210ENST00000503827 GJA10Q969M2 543 aa17.67■□□□□ 0.42
PDLIM7-210ENST00000503827 ZFP42Q96MM3 310 aa17.67■□□□□ 0.42
PDLIM7-210ENST00000503827 LSG1Q9H089 658 aaKnown RBP17.67■□□□□ 0.42
PDLIM7-210ENST00000503827 RNF39Q9H2S5 420 aa17.67■□□□□ 0.42
PDLIM7-210ENST00000503827 HEBP1Q9NRV9 189 aa17.67■□□□□ 0.42
PDLIM7-210ENST00000503827 FOXD2O60548 495 aaPredicted RBP17.66■□□□□ 0.42
PDLIM7-210ENST00000503827 AXLP30530 894 aa17.66■□□□□ 0.42
PDLIM7-210ENST00000503827 PSMC5P62195 406 aa17.66■□□□□ 0.42
PDLIM7-210ENST00000503827 NCBP1Q09161 790 aaKnown RBP17.66■□□□□ 0.42
PDLIM7-210ENST00000503827 COL9A2Q14055 689 aaPredicted RBP17.66■□□□□ 0.42
PDLIM7-210ENST00000503827 NECTIN1Q15223 517 aa17.66■□□□□ 0.42
PDLIM7-210ENST00000503827 CSRP2Q16527 193 aa17.66■□□□□ 0.42
PDLIM7-210ENST00000503827 NOTUMQ6P988 496 aa17.66■□□□□ 0.42
PDLIM7-210ENST00000503827 HACE1Q8IYU2 909 aa17.66■□□□□ 0.42
PDLIM7-210ENST00000503827 CCDC51Q96ER9 411 aa17.66■□□□□ 0.42
PDLIM7-210ENST00000503827 IER2Q9BTL4 223 aa17.66■□□□□ 0.42
PDLIM7-210ENST00000503827 APOL6Q9BWW8 343 aa17.66■□□□□ 0.42
PDLIM7-210ENST00000503827 EIF2AQ9BY44 585 aaKnown RBP17.66■□□□□ 0.42
PDLIM7-210ENST00000503827 KCNH3Q9ULD8 1083 aa17.66■□□□□ 0.42
PDLIM7-210ENST00000503827 GIT1Q9Y2X7 761 aa17.66■□□□□ 0.42
PDLIM7-210ENST00000503827 HES2Q9Y543 173 aa17.66■□□□□ 0.42
PDLIM7-210ENST00000503827 SF3B1O75533 1304 aaKnown RBP eCLIP17.66■□□□□ 0.424e-7■■■■■ 44.1
PDLIM7-210ENST00000503827 KLF18A0A0U1RQI7 1052 aa17.65■□□□□ 0.42
PDLIM7-210ENST00000503827 ECI2O75521 394 aa17.65■□□□□ 0.42
PDLIM7-210ENST00000503827 TDGF1P13385 188 aa17.65■□□□□ 0.42
PDLIM7-210ENST00000503827 LAMTOR4Q0VGL1 99 aa17.65■□□□□ 0.42
PDLIM7-210ENST00000503827 PCBP1Q15365 356 aaKnown RBP eCLIP17.65■□□□□ 0.424e-10■■■■■ 32.7
PDLIM7-210ENST00000503827 RTP2Q5QGT7 225 aa17.65■□□□□ 0.42
PDLIM7-210ENST00000503827 MAMSTRQ6ZN01 415 aa17.65■□□□□ 0.42
PDLIM7-210ENST00000503827 NPAS3Q8IXF0 933 aa17.65■□□□□ 0.42
PDLIM7-210ENST00000503827 TMEM143Q96AN5 459 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms